Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_A19
(390 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0319 - 16712572-16712654,16712756-16712797,16713955-167142... 228 1e-60
03_01_0276 + 2124538-2124550,2124678-2124962,2126813-2126854,212... 228 1e-60
02_05_1201 + 34929577-34929589,34930252-34930587,34931378-349314... 220 3e-58
12_02_1115 - 26173351-26173725,26174241-26174344,26174812-26174845 66 9e-12
07_03_0137 + 14101849-14102511 30 0.75
03_02_0027 + 5100865-5100878,5102241-5102708,5102795-5103021,510... 30 0.75
04_04_1586 - 34621945-34623366 29 0.99
12_02_0304 + 17112677-17113195 29 1.7
08_02_0644 - 19658270-19658626,19659142-19659218,19659256-196594... 29 1.7
02_04_0663 + 24820745-24821065,24821415-24821861,24821949-248223... 29 1.7
12_01_0694 - 5923836-5924450 28 2.3
11_04_0068 - 13116037-13116414,13116501-13116947,13117026-131177... 28 2.3
01_07_0090 - 41003888-41004716,41005142-41005559,41007010-41007193 28 2.3
10_05_0088 - 9037516-9037997,9038171-9038513,9039512-9039787 28 3.0
06_03_1073 - 27373259-27373304,27373542-27373624,27373719-273743... 28 3.0
06_01_0198 + 1529190-1530371 28 3.0
02_05_0591 - 30183105-30183869 28 3.0
02_01_0321 - 2162015-2162134,2162763-2162846,2162931-2163011,216... 28 3.0
02_01_0319 - 2148788-2148892,2149474-2149557,2149643-2149723,215... 28 3.0
11_06_0690 + 26303733-26306540 27 4.0
07_03_0138 - 14140653-14140988 27 4.0
06_03_0458 - 20995834-20996004,20996404-20997309,20997778-209979... 27 4.0
02_01_0753 - 5586705-5586766,5587864-5588056,5588154-5588423,558... 27 4.0
01_06_1755 - 39673030-39673338 27 4.0
12_02_1007 - 25248653-25249078,25249956-25250021,25250108-252502... 27 5.3
06_01_0180 - 1397432-1399969 27 5.3
03_03_0041 - 14007687-14009381 27 5.3
03_02_0383 + 7966929-7968951,7969085-7969104 27 5.3
02_02_0500 - 10993675-10994067,10994434-10995738 27 5.3
01_03_0103 - 12567986-12568141,12568307-12568442,12568751-125688... 27 5.3
11_06_0434 - 23512921-23513529 27 7.0
09_06_0199 + 21526872-21527250,21527431-21527594,21527673-215277... 27 7.0
01_03_0117 + 12684729-12685886,12685978-12686145,12686292-126863... 27 7.0
11_06_0538 + 24759030-24759379,24759380-24759488,24759604-247596... 26 9.2
05_07_0317 - 29193940-29193978,29194208-29194496,29194579-291947... 26 9.2
04_01_0580 - 7539208-7539328,7539409-7539579,7539658-7540024,754... 26 9.2
02_05_0373 + 28374298-28374380,28375126-28375303,28375975-283760... 26 9.2
01_06_1038 - 33997124-33997177,33997256-33997318,33997456-339975... 26 9.2
>10_08_0319 -
16712572-16712654,16712756-16712797,16713955-16714239,
16714346-16714358
Length = 140
Score = 228 bits (557), Expect = 1e-60
Identities = 103/126 (81%), Positives = 119/126 (94%)
Frame = +3
Query: 12 MSKRGRGGSAGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDM 191
MSKRGRGGSAG KFR+SLGLPV A +NCADNTGAKNLY+I+V+GIKGRLNRLP+A GDM
Sbjct: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
Query: 192 IVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGP 371
++ATVKKGKP+LRKKVMPAV++RQRKP+RR+DGV++YFEDNAGVIVN KGEMKGSAITGP
Sbjct: 61 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVYMYFEDNAGVIVNPKGEMKGSAITGP 120
Query: 372 VAKECA 389
+ KECA
Sbjct: 121 IGKECA 126
>03_01_0276 +
2124538-2124550,2124678-2124962,2126813-2126854,
2126943-2127025
Length = 140
Score = 228 bits (557), Expect = 1e-60
Identities = 103/126 (81%), Positives = 119/126 (94%)
Frame = +3
Query: 12 MSKRGRGGSAGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDM 191
MSKRGRGGSAG KFR+SLGLPV A +NCADNTGAKNLY+I+V+GIKGRLNRLP+A GDM
Sbjct: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
Query: 192 IVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGP 371
++ATVKKGKP+LRKKVMPAV++RQRKP+RR+DGV++YFEDNAGVIVN KGEMKGSAITGP
Sbjct: 61 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVYMYFEDNAGVIVNPKGEMKGSAITGP 120
Query: 372 VAKECA 389
+ KECA
Sbjct: 121 IGKECA 126
>02_05_1201 +
34929577-34929589,34930252-34930587,34931378-34931419,
34931630-34931712
Length = 157
Score = 220 bits (538), Expect = 3e-58
Identities = 99/122 (81%), Positives = 115/122 (94%)
Frame = +3
Query: 24 GRGGSAGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVAT 203
GRGGSAG KFR+SLGLPV A +NCADNTGAKNLY+I+V+GIKGRLNRLP+A GDM++AT
Sbjct: 22 GRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMAT 81
Query: 204 VKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKE 383
VKKGKP+LRKKVMPAV++RQRKP+RR+DGV++YFEDNAGVIVN KGEMKGSAITGP+ KE
Sbjct: 82 VKKGKPDLRKKVMPAVIVRQRKPWRRKDGVYMYFEDNAGVIVNPKGEMKGSAITGPIGKE 141
Query: 384 CA 389
CA
Sbjct: 142 CA 143
>12_02_1115 - 26173351-26173725,26174241-26174344,26174812-26174845
Length = 170
Score = 66.1 bits (154), Expect = 9e-12
Identities = 40/102 (39%), Positives = 59/102 (57%), Gaps = 3/102 (2%)
Frame = +3
Query: 87 INCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKK---VMPAVVI 257
+ DN+GAK V+ +Q ++G+ A GD I+ +VK+ +P + K V+ VV+
Sbjct: 58 LKVVDNSGAKR--VMCIQSLRGK----KGARLGDTIIGSVKEAQPRGKVKKGDVVYGVVV 111
Query: 258 RQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKE 383
R R DG I F+DNA V+VNNKGE+ G+ + GPV E
Sbjct: 112 RAAMKRGRNDGSEIQFDDNAIVLVNNKGELIGTRVFGPVPHE 153
>07_03_0137 + 14101849-14102511
Length = 220
Score = 29.9 bits (64), Expect = 0.75
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 197 GHS*ERQTRTQEKGNASSGDQAAETI*KAGRGVHIFRG*CGGHR-EQQGGDERLGYH 364
G +R +E G A +GD +T +AGRG GG R + +GGD G H
Sbjct: 85 GRGGQRDAGDEEDGKAGAGDGGLQTNQRAGRG--------GGRRGDAEGGDGAAGPH 133
>03_02_0027 +
5100865-5100878,5102241-5102708,5102795-5103021,
5103670-5104577
Length = 538
Score = 29.9 bits (64), Expect = 0.75
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -3
Query: 112 APVLSAQLITAPTGRPSEMRNFAPAEPPRP 23
AP S+ L TAP P++ + FAP PP P
Sbjct: 328 APNASSSLFTAPV--PADRQQFAPPPPPSP 355
>04_04_1586 - 34621945-34623366
Length = 473
Score = 29.5 bits (63), Expect = 0.99
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +3
Query: 12 MSKRGRGGSAGAKFRISLGLPVGAV-INCADNTGAKNLYVIAVQGIKGRLNRLPAAGS 182
++ RG GG+ + +PVGAV + N A + Y + + GI RLP S
Sbjct: 282 LASRGAGGAGSLVLGRTEAVPVGAVWVPLVRNNQASSFYYVGLTGIGVGGERLPLQDS 339
>12_02_0304 + 17112677-17113195
Length = 172
Score = 28.7 bits (61), Expect = 1.7
Identities = 24/77 (31%), Positives = 32/77 (41%), Gaps = 4/77 (5%)
Frame = -3
Query: 241 ITFFLSSGLPFLTVATIMSPE-PAAGNLFRRPLIPCTAITYRFFAPVLSAQLITA---PT 74
+ F + LPFL+ A P+ P N R P P A + A A +I P
Sbjct: 8 VIFLAAIILPFLSFAEAQQPQTPPRRNPPRAPPSPRRAPSPSVTAEPTPAPVIAPSPPPV 67
Query: 73 GRPSEMRNFAPAEPPRP 23
PS+ AP +PP P
Sbjct: 68 VAPSQPLVVAPTQPPTP 84
>08_02_0644 -
19658270-19658626,19659142-19659218,19659256-19659430,
19659543-19659596,19659691-19659858,19660756-19660953,
19661546-19661632,19661739-19661827,19662499-19662955
Length = 553
Score = 28.7 bits (61), Expect = 1.7
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +2
Query: 242 ASSGDQAAETI*KAGRGVHIFRG*CGGHREQQGGDERLGYHRTRR 376
++ G AA K+G G + GG RE+QG D+ +G + +R
Sbjct: 26 SNKGTPAARKRIKSGGGAREKKENSGGAREEQGKDDSVGEEQVQR 70
>02_04_0663 +
24820745-24821065,24821415-24821861,24821949-24822317,
24822324-24822835,24822914-24823084,24823284-24823434,
24823664-24823702
Length = 669
Score = 28.7 bits (61), Expect = 1.7
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -3
Query: 103 LSAQLITAPTGRPSEMRNFAPAEPP 29
++A+ TAP GRP + FAP+ PP
Sbjct: 345 VTARPTTAPGGRPPKRPAFAPSAPP 369
>12_01_0694 - 5923836-5924450
Length = 204
Score = 28.3 bits (60), Expect = 2.3
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = +2
Query: 197 GHS*ERQTRTQEKGNASSGDQAAETI*KAGRGVHIFRG*CGGHR-EQQGGDERLGYH 364
G R +E G A +GD T +AGRG GG R + +GGD G H
Sbjct: 65 GRGDRRDAGDEEDGEAGAGDGGLRTNQRAGRG--------GGRRGDAEGGDGAAGPH 113
>11_04_0068 -
13116037-13116414,13116501-13116947,13117026-13117757,
13118235-13118348
Length = 556
Score = 28.3 bits (60), Expect = 2.3
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3
Query: 103 LSAQLITAPTGRPSEMRNFAPAEPP 29
++A TAP GRP + FAP+ PP
Sbjct: 514 VTASPTTAPGGRPPKRPAFAPSAPP 538
>01_07_0090 - 41003888-41004716,41005142-41005559,41007010-41007193
Length = 476
Score = 28.3 bits (60), Expect = 2.3
Identities = 17/49 (34%), Positives = 21/49 (42%)
Frame = +3
Query: 33 GSAGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAG 179
GSA A + L A + +TG GI G L+RLPA G
Sbjct: 327 GSAAAIMSATALLQKAAELGATTSTGCYGGVAFPAMGIAGGLDRLPAIG 375
>10_05_0088 - 9037516-9037997,9038171-9038513,9039512-9039787
Length = 366
Score = 27.9 bits (59), Expect = 3.0
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -3
Query: 103 LSAQLITAPTGRPSEMRNFAPAEP 32
++A+ TAP+GRP FAP+ P
Sbjct: 295 ITARPTTAPSGRPPRRPTFAPSAP 318
>06_03_1073 -
27373259-27373304,27373542-27373624,27373719-27374397,
27374493-27374563,27374635-27374727,27375855-27375928,
27376016-27376073,27376212-27376349
Length = 413
Score = 27.9 bits (59), Expect = 3.0
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -2
Query: 380 LSDGSCDSRAFHLPLVVHDDPRIILEIY 297
++DGS DS FH PLV+ DD + +Y
Sbjct: 189 INDGSSDS-PFHTPLVLRDDMQTPRTVY 215
>06_01_0198 + 1529190-1530371
Length = 393
Score = 27.9 bits (59), Expect = 3.0
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -3
Query: 232 FLSSGLPFLTVATIMSPEPAAGNLFRRPLIPCTAITYRFF 113
+L++ L L VAT++S P AG L +P T F+
Sbjct: 171 YLAAALGALLVATLLSSSPFAGALASLAALPATRFARSFW 210
>02_05_0591 - 30183105-30183869
Length = 254
Score = 27.9 bits (59), Expect = 3.0
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -2
Query: 338 LVVHDDPRIILEIYEHPVPPSKWFPLPDHHCWHYLFP 228
+V H D ++ +Y P P P HH +H L P
Sbjct: 157 MVTHHDMQMHAAMYGGGAVPPPPHPPPHHHAFHQLMP 193
>02_01_0321 -
2162015-2162134,2162763-2162846,2162931-2163011,
2163690-2163867,2163946-2164089,2164194-2164240,
2164520-2164576,2165286-2165408,2165496-2165618,
2165959-2166072,2166169-2166176,2166272-2166458,
2174597-2174763,2174924-2175008,2176632-2176820,
2177727-2177918,2178434-2178634
Length = 699
Score = 27.9 bits (59), Expect = 3.0
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Frame = +1
Query: 1 ARGKCLKEDVVVPRER--SSASRWVSQW 78
AR C KED+V PR R ++ W+ +W
Sbjct: 272 ARSACAKEDLVCPRTRLQNAVWSWLYKW 299
>02_01_0319 -
2148788-2148892,2149474-2149557,2149643-2149723,
2150303-2150480,2150811-2150954,2151048-2151094,
2151353-2151409,2151566-2151664,2151867-2151989,
2152083-2152205,2152594-2152707,2152972-2153160,
2153412-2153578,2153904-2153988,2155431-2155628,
2155978-2156175
Length = 663
Score = 27.9 bits (59), Expect = 3.0
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Frame = +1
Query: 1 ARGKCLKEDVVVPRER--SSASRWVSQW 78
AR C KED+V PR R ++ W+ +W
Sbjct: 210 ARSACAKEDLVCPRTRLQNAVWSWLYKW 237
>11_06_0690 + 26303733-26306540
Length = 935
Score = 27.5 bits (58), Expect = 4.0
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = -3
Query: 133 AITYRFFAPVL-SAQLITAPTGRPSEMRNFAPAEPPRPLL 17
A+ F PV S Q + P + S + A EPP+PLL
Sbjct: 561 AVVGAFTRPVFWSPQPVFVPAAKDSPPESAAATEPPQPLL 600
>07_03_0138 - 14140653-14140988
Length = 111
Score = 27.5 bits (58), Expect = 4.0
Identities = 20/59 (33%), Positives = 26/59 (44%)
Frame = +2
Query: 197 GHS*ERQTRTQEKGNASSGDQAAETI*KAGRGVHIFRG*CGGHREQQGGDERLGYHRTR 373
G ERQ Q +G S G++ E + G G F G GG E + ER R+R
Sbjct: 46 GREGERQRGRQWRGRGSGGEEGVEGGGEGGEGGG-FGGGEGGGGEVEAAVERRAAERSR 103
>06_03_0458 -
20995834-20996004,20996404-20997309,20997778-20997942,
20998024-20998353,20998471-20998527,20998579-20998692,
20999220-20999381,20999465-20999527,21001100-21001207,
21001598-21001675,21001771-21001902
Length = 761
Score = 27.5 bits (58), Expect = 4.0
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Frame = +3
Query: 306 EDNAGVIV--NNKGEMKGSAITGPVAKECA 389
ED +I+ N+KG +GS ITG + + CA
Sbjct: 715 EDGDKIIMSSNDKGSNQGSFITGKIVESCA 744
>02_01_0753 -
5586705-5586766,5587864-5588056,5588154-5588423,
5588522-5588687,5589049-5589209,5590065-5590181,
5590269-5590549,5590750-5590833,5591100-5592542,
5593167-5593575
Length = 1061
Score = 27.5 bits (58), Expect = 4.0
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = -3
Query: 238 TFFLSSGLPFLTVATIMSPEPAAGNLFRRPLIPC 137
T+ ++G F ++++ SPE GN F+ ++ C
Sbjct: 422 TYLKAAGNSFAVLSSVSSPEVPCGNCFKVEILYC 455
>01_06_1755 - 39673030-39673338
Length = 102
Score = 27.5 bits (58), Expect = 4.0
Identities = 16/33 (48%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
Frame = +2
Query: 278 KAGRGVHIFRG*CGGHREQQG---GDERLGYHR 367
+AGRG H G GGH G GD LG HR
Sbjct: 41 RAGRGHHHGNGGGGGHLGYSGSRHGDAHLGGHR 73
>12_02_1007 -
25248653-25249078,25249956-25250021,25250108-25250260,
25250961-25251336,25252001-25252143
Length = 387
Score = 27.1 bits (57), Expect = 5.3
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = -3
Query: 217 LPFLTVATIMSPEPAAGNLFRRPLIPCTAITYR 119
LP+ ++ P PAA L+ RP P + R
Sbjct: 333 LPYPPYPAVLLPPPAAATLYGRPPAPAPGVAAR 365
>06_01_0180 - 1397432-1399969
Length = 845
Score = 27.1 bits (57), Expect = 5.3
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +1
Query: 25 DVVVPRERSSASRWVSQWEL*SIVQIIQEQKI 120
D +PRE+ S + W QW+ +++ I + K+
Sbjct: 717 DPQLPREQVSLAEWGMQWKRKGLIEKIMDPKL 748
>03_03_0041 - 14007687-14009381
Length = 564
Score = 27.1 bits (57), Expect = 5.3
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = -3
Query: 178 PAAGNLFRRPLIPCTAITYRFFAPVLSAQLITAPTGRPSEMRNFAPAEPP-RPLLDIFLV 2
PA L L+P + RF LS+ L AP P+E + EPP P +D FL+
Sbjct: 67 PACVRLTLSHLLPSPDPSLRFLR-FLSSHLPAAPDAAPAEPEHEHEHEPPLLPGVDGFLI 125
>03_02_0383 + 7966929-7968951,7969085-7969104
Length = 680
Score = 27.1 bits (57), Expect = 5.3
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 6 RKMSKRGRGGSAGAKFRISLGLPVGA 83
R+ KRG G GA R+ +G+ VGA
Sbjct: 65 RRGRKRGAGAGGGAAARMGVGVGVGA 90
>02_02_0500 - 10993675-10994067,10994434-10995738
Length = 565
Score = 27.1 bits (57), Expect = 5.3
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Frame = -3
Query: 367 PVIAEPFISPLLFTMTPALSSKYMNTPSRLLNGFRCLITT--AGITFFL--SSGLPFLTV 200
P EP I+ ++PA+ +T S + NG+ +++T +G +F+ SSG + V
Sbjct: 225 PAPVEPIIANGKVKLSPAVMEMIYSTISGIENGYLPVMSTEGSGGVYFMKDSSGESNVAV 284
Query: 199 ATIMSPEPAAGN 164
+ EP A N
Sbjct: 285 FKPIDEEPMAKN 296
>01_03_0103 - 12567986-12568141,12568307-12568442,12568751-12568824,
12568932-12569175,12569480-12569766,12570618-12571103,
12571348-12571459,12571540-12571745,12573071-12573276,
12573831-12574162,12574284-12574825,12574967-12576308,
12576386-12576457,12578438-12578505,12579011-12580174
Length = 1808
Score = 27.1 bits (57), Expect = 5.3
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -2
Query: 281 PSKWFPLPDHHCW 243
P WFP PD +CW
Sbjct: 1420 PWFWFPSPDRNCW 1432
>11_06_0434 - 23512921-23513529
Length = 202
Score = 26.6 bits (56), Expect = 7.0
Identities = 20/76 (26%), Positives = 34/76 (44%)
Frame = +3
Query: 96 ADNTGAKNLYVIAVQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPF 275
AD+ V V+ + + AG GD VA +GK L ++ + A++ + KP+
Sbjct: 4 ADDAKVTRRKVRMVKAVVYEVEAAATAGEGDTPVA---EGKVRLSQESVDAILAEETKPY 60
Query: 276 RRRDGVFIYFEDNAGV 323
+ F +DN V
Sbjct: 61 PNME-YFRSLKDNPAV 75
>09_06_0199 +
21526872-21527250,21527431-21527594,21527673-21527736,
21528001-21528134,21528302-21528385,21528526-21528600,
21528683-21528754,21528852-21528925,21529185-21529282,
21529355-21529464,21529794-21529862,21529944-21530018,
21530519-21530611,21530690-21530769,21530877-21530976,
21531150-21531586,21531676-21531706,21532873-21533822,
21533982-21534201
Length = 1102
Score = 26.6 bits (56), Expect = 7.0
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = -2
Query: 311 ILEIYEHPVPPSKWFPLPDHHCWHYLFP-EFWFAFLN 204
IL Y+H +P L + HC + P + W F+N
Sbjct: 737 ILGCYDHLLPEHIRLDLQEQHCNDHKVPDDLWLEFIN 773
>01_03_0117 +
12684729-12685886,12685978-12686145,12686292-12686336,
12686438-12687280
Length = 737
Score = 26.6 bits (56), Expect = 7.0
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +3
Query: 78 GAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSG 185
GA CA+ T A + +A +GI+G N P G G
Sbjct: 625 GAGAGCANQTAAVRVDGVAYRGIRGTYN--PRGGGG 658
>11_06_0538 +
24759030-24759379,24759380-24759488,24759604-24759692,
24760179-24760287,24760370-24760471,24760564-24760628,
24760830-24760936,24761023-24761087,24761163-24761217,
24761305-24761465
Length = 403
Score = 26.2 bits (55), Expect = 9.2
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Frame = -3
Query: 334 LFTMTPALSSKY-MNTPSRLLNGFRCLITT--AGITFFLSSGLPFLTVATIMSPEPAAGN 164
L T P + M SRL R L AG+ FF S+ + + I+ P P++
Sbjct: 37 LLTQRPCVEGTMTMGEQSRLPESLRLLDAAFDAGVNFFDSAEMYYYAPLLILPPPPSSFP 96
Query: 163 LFR 155
LF+
Sbjct: 97 LFQ 99
>05_07_0317 -
29193940-29193978,29194208-29194496,29194579-29194749,
29194829-29195715,29195803-29196249,29196328-29197056
Length = 853
Score = 26.2 bits (55), Expect = 9.2
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3
Query: 103 LSAQLITAPTGRPSEMRNFAPAEPP 29
++A+ TAP GRP + AP+ PP
Sbjct: 481 VTARPTTAPGGRPPKRPTSAPSAPP 505
>04_01_0580 -
7539208-7539328,7539409-7539579,7539658-7540024,
7540093-7540516
Length = 360
Score = 26.2 bits (55), Expect = 9.2
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -3
Query: 97 AQLITAPTGRPSEMRNFAPAEPP 29
A+ TAP+GRP + + AP PP
Sbjct: 80 ARPTTAPSGRPPKRPDSAPLAPP 102
>02_05_0373 +
28374298-28374380,28375126-28375303,28375975-28376065,
28376162-28376256,28376379-28376468,28376789-28376837,
28376941-28377079,28377224-28377340,28377437-28377527,
28377604-28377746,28378009-28378123,28378439-28378483,
28378565-28378645
Length = 438
Score = 26.2 bits (55), Expect = 9.2
Identities = 13/59 (22%), Positives = 30/59 (50%)
Frame = +3
Query: 210 KGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKEC 386
K P +V AV R+ +++ VF+ ++ +++++KG + +TG + +C
Sbjct: 153 KPVPNATLQVTGAVGWRREGLMYKKNEVFLDIVESVNLLMSSKGSVLRCDVTGKILMKC 211
>01_06_1038 -
33997124-33997177,33997256-33997318,33997456-33997506,
33998100-33998257,33998406-33998491,33998674-33999527
Length = 421
Score = 26.2 bits (55), Expect = 9.2
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = +3
Query: 18 KRGRGGSAGAKFRISLGLPVGAVINCADNTGAKNLYVIAVQGIKG 152
+R R AGAK + ++ P+ VI C N ++ V + G
Sbjct: 80 ERSRARGAGAKAKAAVSSPLQWVITCFSVASLPNTIIMGVPLLNG 124
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,666,618
Number of Sequences: 37544
Number of extensions: 300095
Number of successful extensions: 1058
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1058
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 660830060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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