Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_A19
         (390 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    27   0.32 
AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...    23   3.0  
AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    23   5.2  
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    23   5.2  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            23   5.2  
AY745210-1|AAU93477.1|   86|Anopheles gambiae cytochrome P450 pr...    22   6.9  
EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    22   9.1  
AY341161-1|AAR13725.1|  159|Anopheles gambiae CED6 protein.            22   9.1  
AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant r...    22   9.1  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    22   9.1  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 26.6 bits (56), Expect = 0.32
 Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
 Frame = -3

Query: 112 APVLSAQLITAPTGRPSE--MRNFAPAEP 32
           APV+ + ++TAP  RPS+     FAP EP
Sbjct: 91  APVVPSSVVTAPPARPSQPPTTRFAP-EP 118


>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -2

Query: 278 SKWFPLPDHHC 246
           SKW+P   HHC
Sbjct: 98  SKWYPEIKHHC 108


>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = -2

Query: 272 WFPLPDHHC 246
           WFP  D HC
Sbjct: 154 WFPFDDQHC 162


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 6/9 (66%), Positives = 6/9 (66%)
 Frame = -2

Query: 272 WFPLPDHHC 246
           WFP  D HC
Sbjct: 154 WFPFDDQHC 162


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = -3

Query: 112  APVLSAQLITAPTGRPSEMRNFAPAEPPRP 23
            A  +S+     P  +P++    +PAE P P
Sbjct: 951  ASYVSSNATVVPATQPADASQASPAEEPLP 980



 Score = 21.8 bits (44), Expect = 9.1
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = -2

Query: 170 W*PVQTTLDTLYGNHIQIFCSCIICTIDHSSHWETQ 63
           W  +     T  GN+ +I     + TID SS+  T+
Sbjct: 573 WLDIHANKITELGNYFEIESQLALSTIDASSNQLTE 608


>AY745210-1|AAU93477.1|   86|Anopheles gambiae cytochrome P450
           protein.
          Length = 86

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
 Frame = +1

Query: 4   RGKCLKEDVVVPRERSSASRWVSQW-EL*SIVQIIQEQKICM*LPYKVSRVV*TGYQLL 177
           R  CL ED     +R    RW+ Q  E  ++V    E    + LP+ + R +  G +++
Sbjct: 18  RVACLSEDNFQQADRFLPDRWLEQRDENDNVVNKRAEPGASVVLPFGIGRRMCPGQKVI 76


>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 21.8 bits (44), Expect = 9.1
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +2

Query: 317 GGHREQQGGDERLGY 361
           GGHRE +G    LGY
Sbjct: 14  GGHRESRGIGLGLGY 28


>AY341161-1|AAR13725.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 21.8 bits (44), Expect = 9.1
 Identities = 11/39 (28%), Positives = 15/39 (38%)
 Frame = +3

Query: 72  PVGAVINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSGD 188
           P+  +  CAD  G K  +    +   G       A SGD
Sbjct: 67  PLHKISYCADEKGVKKFFSFIAKTGTGATPTSSIASSGD 105


>AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant
           receptor Or1 protein.
          Length = 417

 Score = 21.8 bits (44), Expect = 9.1
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -2

Query: 296 EHPVPPSKWFPLPDHH 249
           E  +P   WFP+  HH
Sbjct: 161 ERRLPVPAWFPVDYHH 176


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 21.8 bits (44), Expect = 9.1
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = -2

Query: 329 HDDPRIILEIYEHPVPPSKW 270
           H D  ++ E+Y HP     W
Sbjct: 27  HADVILVSELYRHPPNNGNW 46


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 465,515
Number of Sequences: 2352
Number of extensions: 10407
Number of successful extensions: 23
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 30356973
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)