BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= S06A01NCLL0001_A19 (390 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 23 1.6 EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 23 1.6 EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 23 1.6 EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 23 1.6 EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 23 1.6 EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 23 1.6 DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 1.6 DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 23 1.6 AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 23 1.6 AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 22 2.2 AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 22 2.2 DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 22 2.9 AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 22 2.9 DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 21 3.8 DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 21 3.8 DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 21 3.8 DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 21 3.8 DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 21 3.8 DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 21 3.8 DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 21 3.8 DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 21 3.8 DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 21 3.8 DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 21 3.8 DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 21 3.8 DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 21 3.8 DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 21 3.8 DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 21 3.8 DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 21 3.8 DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 21 3.8 DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 21 3.8 AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 21 3.8 AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 21 3.8 EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 21 5.0 EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 21 5.0 DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 21 5.0 DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 21 5.0 DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 21 5.0 AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 21 6.6 AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 6.6 AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein. 21 6.6 EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 20 8.7 AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 20 8.7 AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 20 8.7 >EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine receptor subunitalpha 6 transcript variant 6 protein. Length = 461 Score = 22.6 bits (46), Expect = 1.6 Identities = 6/9 (66%), Positives = 6/9 (66%) Frame = -2 Query: 272 WFPLPDHHC 246 WFP D HC Sbjct: 117 WFPFDDQHC 125 >EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine receptor subunitalpha 6 transcript variant 5 protein. Length = 461 Score = 22.6 bits (46), Expect = 1.6 Identities = 6/9 (66%), Positives = 6/9 (66%) Frame = -2 Query: 272 WFPLPDHHC 246 WFP D HC Sbjct: 117 WFPFDDQHC 125 >EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine receptor subunitalpha 6 transcript variant 4 protein. Length = 461 Score = 22.6 bits (46), Expect = 1.6 Identities = 6/9 (66%), Positives = 6/9 (66%) Frame = -2 Query: 272 WFPLPDHHC 246 WFP D HC Sbjct: 117 WFPFDDQHC 125 >EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine receptor subunitalpha 6 transcript variant 3 protein. Length = 461 Score = 22.6 bits (46), Expect = 1.6 Identities = 6/9 (66%), Positives = 6/9 (66%) Frame = -2 Query: 272 WFPLPDHHC 246 WFP D HC Sbjct: 117 WFPFDDQHC 125 >EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine receptor subunitalpha 6 transcript variant 2 protein. Length = 461 Score = 22.6 bits (46), Expect = 1.6 Identities = 6/9 (66%), Positives = 6/9 (66%) Frame = -2 Query: 272 WFPLPDHHC 246 WFP D HC Sbjct: 117 WFPFDDQHC 125 >EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine receptor subunitalpha 6 transcript variant 1 protein. Length = 461 Score = 22.6 bits (46), Expect = 1.6 Identities = 6/9 (66%), Positives = 6/9 (66%) Frame = -2 Query: 272 WFPLPDHHC 246 WFP D HC Sbjct: 117 WFPFDDQHC 125 >DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine receptor alpha6subunit protein. Length = 529 Score = 22.6 bits (46), Expect = 1.6 Identities = 6/9 (66%), Positives = 6/9 (66%) Frame = -2 Query: 272 WFPLPDHHC 246 WFP D HC Sbjct: 185 WFPFDDQHC 193 >DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine receptor alpha6subunit protein. Length = 529 Score = 22.6 bits (46), Expect = 1.6 Identities = 6/9 (66%), Positives = 6/9 (66%) Frame = -2 Query: 272 WFPLPDHHC 246 WFP D HC Sbjct: 185 WFPFDDQHC 193 >AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex determiner protein. Length = 407 Score = 22.6 bits (46), Expect = 1.6 Identities = 10/25 (40%), Positives = 13/25 (52%) Frame = -1 Query: 111 LLYYLHN*SQLPLGDPARCGTSLPR 37 L Y + N Q+P+ P CG PR Sbjct: 336 LYYNIINIEQIPVPVPVYCGNFPPR 360 >AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-activated ion channelvariant L protein. Length = 664 Score = 22.2 bits (45), Expect = 2.2 Identities = 9/19 (47%), Positives = 15/19 (78%) Frame = +1 Query: 61 RWVSQWEL*SIVQIIQEQK 117 R+VSQWE I+Q +Q+++ Sbjct: 227 RYVSQWEEVYILQNLQKKR 245 >AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex determiner protein. Length = 406 Score = 22.2 bits (45), Expect = 2.2 Identities = 10/25 (40%), Positives = 13/25 (52%) Frame = -1 Query: 111 LLYYLHN*SQLPLGDPARCGTSLPR 37 L Y + N Q+P+ P CG PR Sbjct: 334 LYYNIINIEQIPVPVPIYCGNFPPR 358 >DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex determiner protein. Length = 178 Score = 21.8 bits (44), Expect = 2.9 Identities = 9/22 (40%), Positives = 12/22 (54%) Frame = -1 Query: 102 YLHN*SQLPLGDPARCGTSLPR 37 Y+ N Q+P+ P CG PR Sbjct: 109 YIINIEQIPVPVPIYCGNFPPR 130 >AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex determiner protein. Length = 419 Score = 21.8 bits (44), Expect = 2.9 Identities = 9/22 (40%), Positives = 12/22 (54%) Frame = -1 Query: 102 YLHN*SQLPLGDPARCGTSLPR 37 Y+ N Q+P+ P CG PR Sbjct: 350 YIINIEQIPVPVPIYCGNFPPR 371 >DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.4 bits (43), Expect = 3.8 Identities = 9/25 (36%), Positives = 13/25 (52%) Frame = -1 Query: 111 LLYYLHN*SQLPLGDPARCGTSLPR 37 L Y ++ Q+P+ P CG PR Sbjct: 109 LYYNINYIEQIPIPVPVYCGNFPPR 133 >DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.4 bits (43), Expect = 3.8 Identities = 10/26 (38%), Positives = 13/26 (50%) Frame = -1 Query: 114 LLLYYLHN*SQLPLGDPARCGTSLPR 37 L Y + N Q+P+ P CG PR Sbjct: 108 LQYYNIINIEQIPVPVPIYCGNFPPR 133 >DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.4 bits (43), Expect = 3.8 Identities = 10/26 (38%), Positives = 13/26 (50%) Frame = -1 Query: 114 LLLYYLHN*SQLPLGDPARCGTSLPR 37 L Y + N Q+P+ P CG PR Sbjct: 108 LQYYNIINIEQIPVPVPIYCGNFPPR 133 >DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.4 bits (43), Expect = 3.8 Identities = 10/26 (38%), Positives = 13/26 (50%) Frame = -1 Query: 114 LLLYYLHN*SQLPLGDPARCGTSLPR 37 L Y + N Q+P+ P CG PR Sbjct: 108 LQYYNIINIEQIPVPVPIYCGNFPPR 133 >DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.4 bits (43), Expect = 3.8 Identities = 10/26 (38%), Positives = 13/26 (50%) Frame = -1 Query: 114 LLLYYLHN*SQLPLGDPARCGTSLPR 37 L Y + N Q+P+ P CG PR Sbjct: 108 LQYYNIINIEQIPVPVPIYCGNFPPR 133 >DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.4 bits (43), Expect = 3.8 Identities = 10/26 (38%), Positives = 13/26 (50%) Frame = -1 Query: 114 LLLYYLHN*SQLPLGDPARCGTSLPR 37 L Y + N Q+P+ P CG PR Sbjct: 108 LQYYNIINIEQIPVPVPIYCGNFPPR 133 >DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.4 bits (43), Expect = 3.8 Identities = 10/26 (38%), Positives = 13/26 (50%) Frame = -1 Query: 114 LLLYYLHN*SQLPLGDPARCGTSLPR 37 L Y + N Q+P+ P CG PR Sbjct: 108 LQYYNIINIEQIPVPVPIYCGNFPPR 133 >DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex determiner protein. Length = 185 Score = 21.4 bits (43), Expect = 3.8 Identities = 10/26 (38%), Positives = 13/26 (50%) Frame = -1 Query: 114 LLLYYLHN*SQLPLGDPARCGTSLPR 37 L Y + N Q+P+ P CG PR Sbjct: 112 LQYYNIINIEQIPVPVPIYCGNFPPR 137 >DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.4 bits (43), Expect = 3.8 Identities = 10/26 (38%), Positives = 13/26 (50%) Frame = -1 Query: 114 LLLYYLHN*SQLPLGDPARCGTSLPR 37 L Y + N Q+P+ P CG PR Sbjct: 108 LQYYNIINIEQIPVPVPIYCGNFPPR 133 >DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.4 bits (43), Expect = 3.8 Identities = 9/25 (36%), Positives = 13/25 (52%) Frame = -1 Query: 111 LLYYLHN*SQLPLGDPARCGTSLPR 37 L Y ++ Q+P+ P CG PR Sbjct: 109 LYYNINYIEQIPIPVPVYCGNFPPR 133 >DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.4 bits (43), Expect = 3.8 Identities = 9/25 (36%), Positives = 13/25 (52%) Frame = -1 Query: 111 LLYYLHN*SQLPLGDPARCGTSLPR 37 L Y ++ Q+P+ P CG PR Sbjct: 109 LYYNINYIEQIPIPVPVYCGNFPPR 133 >DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.4 bits (43), Expect = 3.8 Identities = 9/25 (36%), Positives = 13/25 (52%) Frame = -1 Query: 111 LLYYLHN*SQLPLGDPARCGTSLPR 37 L Y ++ Q+P+ P CG PR Sbjct: 109 LYYNINYIEQIPIPVPVYCGNFPPR 133 >DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.4 bits (43), Expect = 3.8 Identities = 9/25 (36%), Positives = 13/25 (52%) Frame = -1 Query: 111 LLYYLHN*SQLPLGDPARCGTSLPR 37 L Y ++ Q+P+ P CG PR Sbjct: 109 LYYNINYIEQIPIPVPVYCGNFPPR 133 >DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.4 bits (43), Expect = 3.8 Identities = 9/25 (36%), Positives = 13/25 (52%) Frame = -1 Query: 111 LLYYLHN*SQLPLGDPARCGTSLPR 37 L Y ++ Q+P+ P CG PR Sbjct: 109 LYYNINYIEQIPIPVPVYCGNFPPR 133 >DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.4 bits (43), Expect = 3.8 Identities = 9/25 (36%), Positives = 13/25 (52%) Frame = -1 Query: 111 LLYYLHN*SQLPLGDPARCGTSLPR 37 L Y ++ Q+P+ P CG PR Sbjct: 109 LYYNINYIEQIPIPVPVYCGNFPPR 133 >DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.4 bits (43), Expect = 3.8 Identities = 9/25 (36%), Positives = 13/25 (52%) Frame = -1 Query: 111 LLYYLHN*SQLPLGDPARCGTSLPR 37 L Y ++ Q+P+ P CG PR Sbjct: 109 LYYNINYIEQIPIPVPVYCGNFPPR 133 >DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex determiner protein. Length = 181 Score = 21.4 bits (43), Expect = 3.8 Identities = 9/25 (36%), Positives = 13/25 (52%) Frame = -1 Query: 111 LLYYLHN*SQLPLGDPARCGTSLPR 37 L Y ++ Q+P+ P CG PR Sbjct: 109 LYYNINYIEQIPIPVPVYCGNFPPR 133 >AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex determiner protein. Length = 414 Score = 21.4 bits (43), Expect = 3.8 Identities = 9/25 (36%), Positives = 13/25 (52%) Frame = -1 Query: 111 LLYYLHN*SQLPLGDPARCGTSLPR 37 L Y ++ Q+P+ P CG PR Sbjct: 342 LYYNINYIEQIPIPVPVYCGNFPPR 366 >AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex determiner protein. Length = 414 Score = 21.4 bits (43), Expect = 3.8 Identities = 9/25 (36%), Positives = 13/25 (52%) Frame = -1 Query: 111 LLYYLHN*SQLPLGDPARCGTSLPR 37 L Y ++ Q+P+ P CG PR Sbjct: 342 LYYNINYIEQIPIPVPVYCGNFPPR 366 >EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. Length = 684 Score = 21.0 bits (42), Expect = 5.0 Identities = 8/17 (47%), Positives = 11/17 (64%) Frame = -2 Query: 281 PSKWFPLPDHHCWHYLF 231 PSK + LPD+ YL+ Sbjct: 245 PSKEYDLPDYRGEEYLY 261 >EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. Length = 684 Score = 21.0 bits (42), Expect = 5.0 Identities = 8/17 (47%), Positives = 11/17 (64%) Frame = -2 Query: 281 PSKWFPLPDHHCWHYLF 231 PSK + LPD+ YL+ Sbjct: 245 PSKEYDLPDYRGEEYLY 261 >DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex determiner protein. Length = 179 Score = 21.0 bits (42), Expect = 5.0 Identities = 9/25 (36%), Positives = 13/25 (52%) Frame = -1 Query: 111 LLYYLHN*SQLPLGDPARCGTSLPR 37 L Y ++ Q+P+ P CG PR Sbjct: 107 LYYNINYIEQIPIPVPIYCGNFPPR 131 >DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex determiner protein. Length = 179 Score = 21.0 bits (42), Expect = 5.0 Identities = 9/25 (36%), Positives = 13/25 (52%) Frame = -1 Query: 111 LLYYLHN*SQLPLGDPARCGTSLPR 37 L Y ++ Q+P+ P CG PR Sbjct: 107 LYYNINYIEQIPIPVPIYCGNFPPR 131 >DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex determiner protein. Length = 179 Score = 21.0 bits (42), Expect = 5.0 Identities = 9/25 (36%), Positives = 13/25 (52%) Frame = -1 Query: 111 LLYYLHN*SQLPLGDPARCGTSLPR 37 L Y ++ Q+P+ P CG PR Sbjct: 107 LYYNINYIEQIPIPVPIYCGNFPPR 131 >AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor protein. Length = 501 Score = 20.6 bits (41), Expect = 6.6 Identities = 8/24 (33%), Positives = 14/24 (58%) Frame = -2 Query: 179 TSSW*PVQTTLDTLYGNHIQIFCS 108 T++ P+ +T T+ NH+ CS Sbjct: 327 TTTTSPMTSTKSTIVRNHLNSTCS 350 >AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein protein. Length = 1124 Score = 20.6 bits (41), Expect = 6.6 Identities = 11/34 (32%), Positives = 18/34 (52%) Frame = +3 Query: 84 VINCADNTGAKNLYVIAVQGIKGRLNRLPAAGSG 185 +IN +++ G K AV+ +N A+GSG Sbjct: 571 IINSSNDEGGKTSPNSAVRKCMSPINGSGASGSG 604 >AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein. Length = 388 Score = 20.6 bits (41), Expect = 6.6 Identities = 9/24 (37%), Positives = 11/24 (45%) Frame = -3 Query: 310 SSKYMNTPSRLLNGFRCLITTAGI 239 + KY N P L F TAG+ Sbjct: 215 NDKYSNVPYFLFGDFNFRTDTAGV 238 >EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-alpha protein. Length = 172 Score = 20.2 bits (40), Expect = 8.7 Identities = 7/18 (38%), Positives = 8/18 (44%) Frame = +2 Query: 32 WFRGSEVPHLAGSPSGSC 85 WF+G V G G C Sbjct: 137 WFKGWTVERKEGKVEGKC 154 >AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-alpha protein. Length = 274 Score = 20.2 bits (40), Expect = 8.7 Identities = 7/18 (38%), Positives = 8/18 (44%) Frame = +2 Query: 32 WFRGSEVPHLAGSPSGSC 85 WF+G V G G C Sbjct: 153 WFKGWTVERKEGKVEGKC 170 >AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha F2 protein. Length = 461 Score = 20.2 bits (40), Expect = 8.7 Identities = 7/18 (38%), Positives = 8/18 (44%) Frame = +2 Query: 32 WFRGSEVPHLAGSPSGSC 85 WF+G V G G C Sbjct: 210 WFKGWTVERKEGKVEGKC 227 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 121,554 Number of Sequences: 438 Number of extensions: 3187 Number of successful extensions: 43 Number of sequences better than 10.0: 43 Number of HSP's better than 10.0 without gapping: 43 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 43 length of database: 146,343 effective HSP length: 52 effective length of database: 123,567 effective search space used: 9514659 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 40 (21.2 bits)
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