Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_A18
         (329 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    25   0.21 
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    25   0.21 
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    23   0.63 
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    23   0.63 
AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A prot...    23   0.63 
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    23   0.63 
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    23   0.83 
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   0.83 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   1.1  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    20   5.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   7.7  

>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 25.0 bits (52), Expect = 0.21
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = +2

Query: 98  PPDAEPASDAQRDGI 142
           PPDA  ASDA R G+
Sbjct: 128 PPDARAASDAARRGV 142


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 25.0 bits (52), Expect = 0.21
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = +2

Query: 98  PPDAEPASDAQRDGI 142
           PPDA  ASDA R G+
Sbjct: 284 PPDARAASDAARRGV 298


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 23.4 bits (48), Expect = 0.63
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = -3

Query: 126 ASEAGSASGGIRLAAQWGDTNSPRAPRDAPISSCRIPAARG 4
           AS   +AS  + +AAQ+    +  A  D P++SC  PAA G
Sbjct: 85  ASSVSAASASMAVAAQFYH-QAASAVVD-PLNSCSQPAAPG 123


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 23.4 bits (48), Expect = 0.63
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = -3

Query: 126 ASEAGSASGGIRLAAQWGDTNSPRAPRDAPISSCRIPAARG 4
           AS   +AS  + +AAQ+    +  A  D P++SC  PAA G
Sbjct: 144 ASSVSAASASMAVAAQFYH-QAASAVVD-PLNSCSQPAAPG 182


>AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A
           protein.
          Length = 150

 Score = 23.4 bits (48), Expect = 0.63
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = -3

Query: 126 ASEAGSASGGIRLAAQWGDTNSPRAPRDAPISSCRIPAARG 4
           AS   +AS  + +AAQ+    +  A  D P++SC  PAA G
Sbjct: 85  ASSVSAASASMAVAAQFYH-QAASAVVD-PLNSCSQPAAPG 123


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 23.4 bits (48), Expect = 0.63
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = -3

Query: 126 ASEAGSASGGIRLAAQWGDTNSPRAPRDAPISSCRIPAARG 4
           AS   +AS  + +AAQ+    +  A  D P++SC  PAA G
Sbjct: 144 ASSVSAASASMAVAAQFYH-QAASAVVD-PLNSCSQPAAPG 182


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 23.0 bits (47), Expect = 0.83
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +1

Query: 235 DHLMIEDRGCEDRRPLGDMRLIRHKFVHKR 324
           D L  E   C + +  G  +++RH   HKR
Sbjct: 69  DALHTECSKCSETQKNGSKKIMRHLIDHKR 98


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.0 bits (47), Expect = 0.83
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -2

Query: 70  HELTASAARRSHILVPNSCSP 8
           +E+T   A   H++ P++C P
Sbjct: 631 NEITLLVATVRHVMAPSTCQP 651


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.6 bits (46), Expect = 1.1
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +2

Query: 68  VSPHCAASLMPPDAEPASDAQRD 136
           ++P+ AAS  PP+ E AS    D
Sbjct: 37  MTPNSAASPAPPEEEAASPTPGD 59


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 20.2 bits (40), Expect = 5.8
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = +3

Query: 9   GLQEFGTRIWERLAALA 59
           G     TRIW R AA A
Sbjct: 518 GPDSLETRIWPRSAAFA 534


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 19.8 bits (39), Expect = 7.7
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -2

Query: 31   LVPNSCSPG 5
            LVP +C+PG
Sbjct: 1229 LVPQNCAPG 1237


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,460
Number of Sequences: 336
Number of extensions: 1406
Number of successful extensions: 18
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6367260
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)