Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_A18
(329 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g06908.1 68415.m00782 hypothetical protein 30 0.43
At2g19900.1 68415.m02326 malate oxidoreductase, putative similar... 28 1.7
At3g15220.1 68416.m01923 protein kinase, putative similar to ser... 27 4.0
At2g34770.1 68415.m04269 fatty acid hydroxylase (FAH1) identical... 26 5.3
At5g19150.2 68418.m02280 carbohydrate kinase family contains Pfa... 25 9.3
At5g19150.1 68418.m02279 carbohydrate kinase family contains Pfa... 25 9.3
At4g03990.1 68417.m00569 hypothetical protein similar to At2g049... 25 9.3
At3g32910.1 68416.m04167 hypothetical protein similar to At2g152... 25 9.3
At3g30450.1 68416.m03852 hypothetical protein similar to At2g049... 25 9.3
At3g23690.1 68416.m02979 basic helix-loop-helix (bHLH) family pr... 25 9.3
At2g43800.1 68415.m05445 formin homology 2 domain-containing pro... 25 9.3
At2g14140.1 68415.m01575 hypothetical protein similar to At2g049... 25 9.3
At2g04970.1 68415.m00518 hypothetical protein similar to At2g152... 25 9.3
At1g32830.1 68414.m04046 hypothetical protein similar to At2g049... 25 9.3
>At2g06908.1 68415.m00782 hypothetical protein
Length = 137
Score = 29.9 bits (64), Expect = 0.43
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 4/38 (10%)
Frame = -3
Query: 132 RCASEAGSASGGIRLAAQW---GD-TNSPRAPRDAPIS 31
RC + GSA+GG AA W G+ + RAP + P S
Sbjct: 40 RCPTHVGSAAGGANFAATWKPKGEMSQEKRAPSEKPKS 77
>At2g19900.1 68415.m02326 malate oxidoreductase, putative similar to
NADP-dependent malic enzyme (EC 1.1.1.40) (NADP-ME)
(SP:P51615) {Vitis vinifera}
Length = 581
Score = 27.9 bits (59), Expect = 1.7
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -1
Query: 236 SRLKSSTSPGTFEVLAEDSVRVEHYI 159
S LKSS G +V EDS +EH I
Sbjct: 7 SDLKSSVDGGVVDVYGEDSATIEHNI 32
>At3g15220.1 68416.m01923 protein kinase, putative similar to
serine/threonine protein kinase 24 [Homo sapiens]
SWISS-PROT:Q9Y6E
Length = 690
Score = 26.6 bits (56), Expect = 4.0
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -3
Query: 126 ASEAGSASGGIRLAAQWGDTNSPRAPR 46
A + SASG + + Q+ D+ SPR P+
Sbjct: 451 AFDDASASGTVVVRGQYDDSGSPRTPK 477
>At2g34770.1 68415.m04269 fatty acid hydroxylase (FAH1) identical to
fatty acid hydroxylase Fah1p GB:AF021804 GI:2736147 from
[Arabidopsis thaliana]
Length = 237
Score = 26.2 bits (55), Expect = 5.3
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -1
Query: 167 HYIIGGSHGSHPAAHRRQARHPGA 96
HY+I G H HP H R P A
Sbjct: 119 HYLIHGCHHKHPMDHLRLVFPPTA 142
>At5g19150.2 68418.m02280 carbohydrate kinase family contains Pfam
profile PF01256: Carbohydrate kinase
Length = 365
Score = 25.4 bits (53), Expect = 9.3
Identities = 10/36 (27%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Frame = -3
Query: 138 PSRCASEAGSASGGIRLAAQWGD--TNSPRAPRDAP 37
P RC + SGG+ + W + P +P + P
Sbjct: 283 PRRCGGQGDILSGGVAVFLSWAQQLKSDPESPSENP 318
>At5g19150.1 68418.m02279 carbohydrate kinase family contains Pfam
profile PF01256: Carbohydrate kinase
Length = 365
Score = 25.4 bits (53), Expect = 9.3
Identities = 10/36 (27%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Frame = -3
Query: 138 PSRCASEAGSASGGIRLAAQWGD--TNSPRAPRDAP 37
P RC + SGG+ + W + P +P + P
Sbjct: 283 PRRCGGQGDILSGGVAVFLSWAQQLKSDPESPSENP 318
>At4g03990.1 68417.m00569 hypothetical protein similar to At2g04970,
At2g15200, At1g32830, At2g14140, At3g30450, At5g34895,
At3g47270, At2g02200
Length = 343
Score = 25.4 bits (53), Expect = 9.3
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -3
Query: 111 SASGGIRLAAQWGDTNSPRA 52
S+SG I L QW T+SP A
Sbjct: 228 SSSGNIPLILQWRSTSSPSA 247
>At3g32910.1 68416.m04167 hypothetical protein similar to At2g15200,
At2g04970, At1g32830, At2g14140, At4g03990
Length = 377
Score = 25.4 bits (53), Expect = 9.3
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -3
Query: 111 SASGGIRLAAQWGDTNSPRA 52
S+SG I L QW T+SP A
Sbjct: 205 SSSGNIPLILQWRSTSSPSA 224
>At3g30450.1 68416.m03852 hypothetical protein similar to At2g04970,
At2g15200, At1g32830, At2g14140, At4g03990, At5g34895,
At3g47270, At2g02200
Length = 800
Score = 25.4 bits (53), Expect = 9.3
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -3
Query: 111 SASGGIRLAAQWGDTNSPRA 52
S+SG I L QW T+SP A
Sbjct: 268 SSSGNIPLILQWRSTSSPSA 287
>At3g23690.1 68416.m02979 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain
Length = 371
Score = 25.4 bits (53), Expect = 9.3
Identities = 12/38 (31%), Positives = 16/38 (42%)
Frame = -3
Query: 117 AGSASGGIRLAAQWGDTNSPRAPRDAPISSCRIPAARG 4
AGS+ G+ GD P +AP + A RG
Sbjct: 159 AGSSKNGVEKCDSKGDNKDDAKPPEAPKDYIHVRARRG 196
>At2g43800.1 68415.m05445 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 894
Score = 25.4 bits (53), Expect = 9.3
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +2
Query: 89 SLMPPDAEPASDAQRDGIHEILL*CNVQP*RSPPPGPQMS 208
S+ PP + + + +GI + L C +P PPP PQ+S
Sbjct: 383 SISPPVSLHSQISSNNGIPKRL--CPARPPPPPPPPPQVS 420
>At2g14140.1 68415.m01575 hypothetical protein similar to At2g04970,
At2g15200, At1g32830, At3g30450, At4g03990, At5g34895,
At3g47270, At2g02200
Length = 847
Score = 25.4 bits (53), Expect = 9.3
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -3
Query: 111 SASGGIRLAAQWGDTNSPRA 52
S+SG I L QW T+SP A
Sbjct: 268 SSSGNIPLILQWRSTSSPSA 287
>At2g04970.1 68415.m00518 hypothetical protein similar to At2g15200,
At1g32830, At2g14140, At3g30450, At4g03990, At5g34895,
At3g47270, At2g02200
Length = 808
Score = 25.4 bits (53), Expect = 9.3
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -3
Query: 111 SASGGIRLAAQWGDTNSPRA 52
S+SG I L QW T+SP A
Sbjct: 268 SSSGNIPLILQWRSTSSPSA 287
>At1g32830.1 68414.m04046 hypothetical protein similar to At2g04970,
At2g15200, At2g14140, At3g30450, At4g03990, At5g34895,
At3g47270, At2g02200
Length = 707
Score = 25.4 bits (53), Expect = 9.3
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -3
Query: 111 SASGGIRLAAQWGDTNSPRA 52
S+SG I L QW T+SP A
Sbjct: 268 SSSGNIPLILQWRSTSSPSA 287
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,121,444
Number of Sequences: 28952
Number of extensions: 130465
Number of successful extensions: 306
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 303
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 306
length of database: 12,070,560
effective HSP length: 71
effective length of database: 10,014,968
effective search space used: 380568784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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