BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= S06A01NCLL0001_A16 (499 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z79759-3|CAB02136.1| 225|Caenorhabditis elegans Hypothetical pr... 31 0.46 Z79758-2|CAB02132.1| 199|Caenorhabditis elegans Hypothetical pr... 31 0.61 U64854-6|AAB18318.2| 5079|Caenorhabditis elegans Uncoordinated p... 29 2.5 D45899-1|BAA08309.1| 5071|Caenorhabditis elegans ryanodine recep... 29 2.5 Z81465-3|CAC42253.4| 800|Caenorhabditis elegans Hypothetical pr... 28 4.3 Z50741-6|CAA90613.3| 331|Caenorhabditis elegans Hypothetical pr... 28 4.3 AL032630-15|CAA21571.3| 331|Caenorhabditis elegans Hypothetical... 28 4.3 Z83109-11|CAJ43454.1| 345|Caenorhabditis elegans Hypothetical p... 27 5.7 Z83116-2|CAB05560.1| 320|Caenorhabditis elegans Hypothetical pr... 27 7.6 >Z79759-3|CAB02136.1| 225|Caenorhabditis elegans Hypothetical protein ZK858.3 protein. Length = 225 Score = 31.1 bits (67), Expect = 0.46 Identities = 11/39 (28%), Positives = 23/39 (58%) Frame = +1 Query: 115 TTFALVLLSYFLVTGGIIYDVIVEPPSVGSTTDEHGHSR 231 +T+ L+++ ++ GG++ D E P + ++DE H R Sbjct: 3 STYILIIVPLIIIGGGVVADNTNETPVLAHSSDEQPHQR 41 >Z79758-2|CAB02132.1| 199|Caenorhabditis elegans Hypothetical protein W10D5.2 protein. Length = 199 Score = 30.7 bits (66), Expect = 0.61 Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 2/69 (2%) Frame = -3 Query: 254 RFGINATGLLWPCSS-VVDPTLGGSTITS*MIPPVTKKYDSKTSANVVIAEGAC-NHVGF 81 R+ ++ G+++ S D T+T+ M P + + YD A VI+ G+C N G+ Sbjct: 86 RYDMDRYGVVFRASPRQADLIFVAGTVTNKMAPALRRIYDQMPEAKWVISMGSCANGGGY 145 Query: 80 FIFIFGISR 54 + + + + R Sbjct: 146 YHYAYSVLR 154 >U64854-6|AAB18318.2| 5079|Caenorhabditis elegans Uncoordinated protein 68 protein. Length = 5079 Score = 28.7 bits (61), Expect = 2.5 Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 4/65 (6%) Frame = -2 Query: 378 KDPIQFWCRWVVSAIQNYKTNXXXXXXKAG---SETFHYILTVNTIR-HKCYRSTMAMFI 211 +DP Q W WV + Y N SE H+ TV++++ CY ++ + Sbjct: 1445 QDPSQVWVGWVTTQYHYYNVNFDGSQGVRKCRFSEADHHGTTVDSVQSQNCYMVNVSELL 1504 Query: 210 GRRPN 196 P+ Sbjct: 1505 ATTPD 1509 >D45899-1|BAA08309.1| 5071|Caenorhabditis elegans ryanodine receptor protein. Length = 5071 Score = 28.7 bits (61), Expect = 2.5 Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 4/65 (6%) Frame = -2 Query: 378 KDPIQFWCRWVVSAIQNYKTNXXXXXXKAG---SETFHYILTVNTIR-HKCYRSTMAMFI 211 +DP Q W WV + Y N SE H+ TV++++ CY ++ + Sbjct: 1566 QDPSQVWVGWVTTQYHYYNVNFDGSQGVRKCRFSEADHHGTTVDSVQSQNCYMVNVSELL 1625 Query: 210 GRRPN 196 P+ Sbjct: 1626 ATTPD 1630 >Z81465-3|CAC42253.4| 800|Caenorhabditis elegans Hypothetical protein C09F9.3 protein. Length = 800 Score = 27.9 bits (59), Expect = 4.3 Identities = 14/36 (38%), Positives = 19/36 (52%) Frame = -3 Query: 152 TKKYDSKTSANVVIAEGACNHVGFFIFIFGISRTVK 45 T YD++T+ +V AEG F I I GI V+ Sbjct: 529 TADYDNRTALHVAAAEGRIKVCKFLINIVGIPHDVR 564 >Z50741-6|CAA90613.3| 331|Caenorhabditis elegans Hypothetical protein Y62H9A.14 protein. Length = 331 Score = 27.9 bits (59), Expect = 4.3 Identities = 14/38 (36%), Positives = 17/38 (44%) Frame = -3 Query: 308 SEKRKLEARPSIIY*PLTRFGINATGLLWPCSSVVDPT 195 S K E PS+ L G++ L PC S DPT Sbjct: 159 SSKENYEKNPSLYQYDLLSTGLDKKNLRKPCDSFEDPT 196 >AL032630-15|CAA21571.3| 331|Caenorhabditis elegans Hypothetical protein Y62H9A.14 protein. Length = 331 Score = 27.9 bits (59), Expect = 4.3 Identities = 14/38 (36%), Positives = 17/38 (44%) Frame = -3 Query: 308 SEKRKLEARPSIIY*PLTRFGINATGLLWPCSSVVDPT 195 S K E PS+ L G++ L PC S DPT Sbjct: 159 SSKENYEKNPSLYQYDLLSTGLDKKNLRKPCDSFEDPT 196 >Z83109-11|CAJ43454.1| 345|Caenorhabditis elegans Hypothetical protein F44G3.12 protein. Length = 345 Score = 27.5 bits (58), Expect = 5.7 Identities = 16/38 (42%), Positives = 19/38 (50%) Frame = -3 Query: 122 NVVIAEGACNHVGFFIFIFGISRTVKGIANKDSIFSFL 9 N+ I N VGFFI + I TVK I+ K I L Sbjct: 197 NLPIELDTVNRVGFFISLQNILHTVKQISTKKIILEEL 234 >Z83116-2|CAB05560.1| 320|Caenorhabditis elegans Hypothetical protein M01B2.2 protein. Length = 320 Score = 27.1 bits (57), Expect = 7.6 Identities = 14/49 (28%), Positives = 26/49 (53%) Frame = -3 Query: 230 LLWPCSSVVDPTLGGSTITS*MIPPVTKKYDSKTSANVVIAEGACNHVG 84 ++ PCS+++ +TS M V ++ + S+ +VI G C H+G Sbjct: 32 IMLPCSAIITIKTFTDILTSAMSFFVMQRIVTDGSSILVIPTGPCTHLG 80 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,199,227 Number of Sequences: 27780 Number of extensions: 261286 Number of successful extensions: 671 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 651 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 671 length of database: 12,740,198 effective HSP length: 76 effective length of database: 10,628,918 effective search space used: 945973702 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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