Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_A16
         (499 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    25   0.58 
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   1.8  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    23   1.8  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   3.1  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   5.4  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   7.1  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   7.1  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   9.4  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   9.4  

>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 24.6 bits (51), Expect = 0.58
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = +1

Query: 346 NPSTPKLNRILLISVAFLCILVSFFTTWIFMRMK 447
           NPS   L  +L I   FL +L +    WIF   K
Sbjct: 44  NPSLHYLLALLYILFTFLALLGNGLVIWIFCAAK 77


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +1

Query: 190  PSVGSTTDEHGHSRPVAFMPNRVNGQY 270
            P VG  T+   HSR  +    R NG+Y
Sbjct: 1761 PPVGHPTNASAHSRSGSQSMPRQNGRY 1787


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
 Frame = +1

Query: 49  TVLEIPNIKIKKPTWLQAPSAMTTFALVLLSYFLVT-GGIIYDVIVEPPSVG 201
           T+L     K+     +Q P     +  + +SY   T  G+IY  ++  PS G
Sbjct: 805 TILSPVREKLSSSQPMQPPQ-QNPYMFLPVSYMSTTMAGVIYPPVIGTPSTG 855


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = -2

Query: 279 FHYILTVNTIRHKCYRSTMAMFIGRRPNTR 190
           F Y + +N   +   + T+ +FIG + + R
Sbjct: 483 FSYTIVINNRNNTSMKGTVRIFIGPKEDER 512


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 37  AIPFTVLEIPNIKIKKPTWL 96
           A PF  +E P+I +   TWL
Sbjct: 328 ATPFVPVEPPDILMPALTWL 347


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -3

Query: 257 TRFGINATGLLWPCSSVVD 201
           T FGI +T  +  CSS+++
Sbjct: 382 TGFGIQSTDFVGDCSSLLN 400


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -3

Query: 233 GLLWPCSSVVDPTLGGSTI 177
           GLL P  ++++PT G + I
Sbjct: 93  GLLKPGCTIIEPTSGNTGI 111


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 5/7 (71%), Positives = 7/7 (100%)
 Frame = +2

Query: 128 WFYYHTF 148
           WFYY+T+
Sbjct: 437 WFYYYTY 443


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 5/7 (71%), Positives = 7/7 (100%)
 Frame = +2

Query: 128 WFYYHTF 148
           WFYY+T+
Sbjct: 437 WFYYYTY 443


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,188
Number of Sequences: 438
Number of extensions: 3051
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13618701
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)