Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_A15
(395 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC087079-7|AAK27870.1| 145|Caenorhabditis elegans Hypothetical ... 119 9e-28
AC087079-8|AAK27871.1| 88|Caenorhabditis elegans Hypothetical ... 55 2e-08
AL021480-3|CAA16328.1| 410|Caenorhabditis elegans Hypothetical ... 33 0.098
AF025450-9|AAB70938.2| 409|Caenorhabditis elegans C-type lectin... 29 1.2
Z99942-7|CAB17070.2| 462|Caenorhabditis elegans Hypothetical pr... 27 3.7
U41274-6|AAA82462.1| 601|Caenorhabditis elegans Hypothetical pr... 27 3.7
AL117206-9|CAL22706.1| 292|Caenorhabditis elegans Hypothetical ... 27 6.4
AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical ... 27 6.4
AF100305-4|AAC68916.2| 426|Caenorhabditis elegans Hypothetical ... 23 7.4
AF100305-3|AAL65795.1| 426|Caenorhabditis elegans Hypothetical ... 23 7.4
Z68315-5|CAE48501.1| 689|Caenorhabditis elegans Hypothetical pr... 26 8.5
Z68315-4|CAA92675.2| 745|Caenorhabditis elegans Hypothetical pr... 26 8.5
Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical pr... 26 8.5
>AC087079-7|AAK27870.1| 145|Caenorhabditis elegans Hypothetical
protein Y37E3.8a protein.
Length = 145
Score = 119 bits (286), Expect = 9e-28
Identities = 55/123 (44%), Positives = 74/123 (60%)
Frame = +3
Query: 27 HLQEEDRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNYH 206
H + RKLRGHVS NAGG+HHHRIN DKYHPGYFGK+GMR +H
Sbjct: 3 HALRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGQHHHRINRDKYHPGYFGKVGMRVFH 62
Query: 207 MRRNKDFCPVLNLDKLWTLVSEQARLKYASATDGKVPVINIVEAXXXXXXXXXXXPKQPV 386
+ +N+ +CP +N+++LW+LV ++ R K AT GK PVI+ + P+ P+
Sbjct: 63 LNKNQHYCPTVNVERLWSLVPQEVRDK---ATGGKSPVIDCTKLGYFKVLGKGLLPETPL 119
Query: 387 IVK 395
IVK
Sbjct: 120 IVK 122
>AC087079-8|AAK27871.1| 88|Caenorhabditis elegans Hypothetical
protein Y37E3.8b protein.
Length = 88
Score = 54.8 bits (126), Expect = 2e-08
Identities = 25/68 (36%), Positives = 41/68 (60%)
Frame = +3
Query: 192 MRNYHMRRNKDFCPVLNLDKLWTLVSEQARLKYASATDGKVPVINIVEAXXXXXXXXXXX 371
MR +H+ +N+ +CP +N+++LW+LV ++ R K AT GK PVI+ +
Sbjct: 1 MRVFHLNKNQHYCPTVNVERLWSLVPQEVRDK---ATGGKSPVIDCTKLGYFKVLGKGLL 57
Query: 372 PKQPVIVK 395
P+ P+IVK
Sbjct: 58 PETPLIVK 65
>AL021480-3|CAA16328.1| 410|Caenorhabditis elegans Hypothetical
protein Y39E4A.2b protein.
Length = 410
Score = 32.7 bits (71), Expect = 0.098
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -3
Query: 132 HHQHYHVHQDAYGACRYDHDHGSRVLSTSCLLLGGG 25
HH H H H ++G + H H + S+ C GGG
Sbjct: 50 HHHHGHGHGHSHGGHGHSHTHNNDDSSSDCSGAGGG 85
>AF025450-9|AAB70938.2| 409|Caenorhabditis elegans C-type lectin
protein 3 protein.
Length = 409
Score = 29.1 bits (62), Expect = 1.2
Identities = 12/49 (24%), Positives = 20/49 (40%)
Frame = -3
Query: 285 LVLPAQRPESTVCQDLKQGRNPCFFSCGNFSYQVCQSTQGGTCPC*FCD 139
L P P S VC+ +PC+++ N+ Y + T C+
Sbjct: 130 LSAPCTEPRSYVCETPSTHEDPCYYNYNNYCYTFSHNQSSFTTAQAICE 178
>Z99942-7|CAB17070.2| 462|Caenorhabditis elegans Hypothetical
protein H13N06.5 protein.
Length = 462
Score = 27.5 bits (58), Expect = 3.7
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = -3
Query: 141 DGAHHQHYHVHQDAYGACRYDHDHGSRVLSTSCLLLGG 28
DG H H H H G H HG+ +S +LGG
Sbjct: 220 DGHGHSHSHGHSHGGGG----HSHGAHDMSVGGWVLGG 253
>U41274-6|AAA82462.1| 601|Caenorhabditis elegans Hypothetical
protein T04G9.6 protein.
Length = 601
Score = 27.5 bits (58), Expect = 3.7
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 156 DKYHPGYFGKLGMRNYHMRRN 218
D YH YFGK G YH+ RN
Sbjct: 405 DNYHNRYFGKAG---YHLTRN 422
>AL117206-9|CAL22706.1| 292|Caenorhabditis elegans Hypothetical
protein Y67A10A.11 protein.
Length = 292
Score = 26.6 bits (56), Expect = 6.4
Identities = 10/20 (50%), Positives = 12/20 (60%), Gaps = 1/20 (5%)
Frame = -3
Query: 207 CGNFSY-QVCQSTQGGTCPC 151
C +Y + C STQ G CPC
Sbjct: 45 CSQINYSRTCLSTQMGNCPC 64
>AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical
protein Y55F3BR.2 protein.
Length = 1594
Score = 26.6 bits (56), Expect = 6.4
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -3
Query: 219 CFFSCGNFSYQVCQSTQGGTCP 154
C FS N Y C + QG CP
Sbjct: 946 CRFSQSNHKYYCCGNIQGSMCP 967
>AF100305-4|AAC68916.2| 426|Caenorhabditis elegans Hypothetical
protein W04B5.3a protein.
Length = 426
Score = 23.4 bits (48), Expect(2) = 7.4
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = -3
Query: 147 FCDGAHHQHYHVH 109
+ DG HH H H H
Sbjct: 410 YYDGGHHHHRHHH 422
Score = 21.4 bits (43), Expect(2) = 7.4
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = -3
Query: 132 HHQHYHVHQD 103
HH+H+H H D
Sbjct: 417 HHRHHHHHCD 426
>AF100305-3|AAL65795.1| 426|Caenorhabditis elegans Hypothetical
protein W04B5.3b protein.
Length = 426
Score = 23.4 bits (48), Expect(2) = 7.4
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = -3
Query: 147 FCDGAHHQHYHVH 109
+ DG HH H H H
Sbjct: 410 YYDGGHHHHRHHH 422
Score = 21.4 bits (43), Expect(2) = 7.4
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = -3
Query: 132 HHQHYHVHQD 103
HH+H+H H D
Sbjct: 417 HHRHHHHHCD 426
>Z68315-5|CAE48501.1| 689|Caenorhabditis elegans Hypothetical
protein F28C6.4b protein.
Length = 689
Score = 26.2 bits (55), Expect = 8.5
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Frame = -2
Query: 331 TMLITGTLPSVADAYFSLACSETRVHS-LSRF-KTGQKSLFL--LMW*FLIP-SLPKYPG 167
T +TGTLPS +LA +E + + +SR K G+K F W L+P S K+ G
Sbjct: 105 TAYLTGTLPSFGTVLTNLATAEMKTANWISRIQKIGKKVHFFGDDTWIRLLPRSFEKFEG 164
>Z68315-4|CAA92675.2| 745|Caenorhabditis elegans Hypothetical
protein F28C6.4a protein.
Length = 745
Score = 26.2 bits (55), Expect = 8.5
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Frame = -2
Query: 331 TMLITGTLPSVADAYFSLACSETRVHS-LSRF-KTGQKSLFL--LMW*FLIP-SLPKYPG 167
T +TGTLPS +LA +E + + +SR K G+K F W L+P S K+ G
Sbjct: 105 TAYLTGTLPSFGTVLTNLATAEMKTANWISRIQKIGKKVHFFGDDTWIRLLPRSFEKFEG 164
>Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical
protein M195.2 protein.
Length = 419
Score = 26.2 bits (55), Expect = 8.5
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -3
Query: 258 STVCQDLKQGRNPCFFSCGNFSYQVCQS 175
S VCQ + + C SC +VCQS
Sbjct: 106 SNVCQQKQYSSSQCASSCNRSCSRVCQS 133
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,666,535
Number of Sequences: 27780
Number of extensions: 176121
Number of successful extensions: 592
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 531
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 582
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 609015246
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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