Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_A15
         (395 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    22   2.9  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    21   6.8  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    21   6.8  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    21   6.8  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    20   9.0  
AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           20   9.0  

>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated
          chloride channel protein.
          Length = 383

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -2

Query: 49 FLSSSWRWPYLRLP 8
          FL+ SWR   LRLP
Sbjct: 56 FLAQSWRDSRLRLP 69


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 126 QHYHVHQDAYGA 91
           +H H HQ  YGA
Sbjct: 19  EHPHQHQQHYGA 30


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +1

Query: 247 TNCGLWSLSRQ 279
           T+C LW++ RQ
Sbjct: 184 TDCQLWAIDRQ 194


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 5/7 (71%), Positives = 7/7 (100%)
 Frame = -3

Query: 132 HHQHYHV 112
           H+QHYH+
Sbjct: 7   HYQHYHI 13


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -2

Query: 283 SLACSETRVHSLSRF 239
           SL C++TR++ L+ F
Sbjct: 65  SLVCADTRLNKLAVF 79


>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 9/33 (27%), Positives = 12/33 (36%)
 Frame = -3

Query: 249 CQDLKQGRNPCFFSCGNFSYQVCQSTQGGTCPC 151
           C D   G + C   C    Y+  + T    C C
Sbjct: 103 CNDTSIGVDGCDLMCCGRGYKTQEVTVVERCAC 135


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,374
Number of Sequences: 438
Number of extensions: 1934
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9761793
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)