Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_A14
(570 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;... 269 3e-71
UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11; ... 264 8e-70
UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3; M... 241 1e-62
UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10... 177 2e-43
UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;... 175 8e-43
UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27... 171 7e-42
UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14; ... 153 2e-36
UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2; D... 132 4e-30
UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6; P... 121 1e-26
UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1; E... 117 2e-25
UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1; G... 117 2e-25
UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12; ... 115 7e-25
UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4; E... 114 1e-24
UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2; T... 109 4e-23
UniRef50_Q8TX50 Cluster: Acidic ribosomal protein P0 homolog; n=... 103 2e-21
UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1; E... 103 4e-21
UniRef50_O94085 Cluster: Putative uncharacterized protein YLR339... 102 7e-21
UniRef50_Q98S65 Cluster: 60S acidic ribosomal protein P0; n=1; G... 101 9e-21
UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6; T... 97 2e-19
UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protei... 70 3e-17
UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiell... 87 2e-16
UniRef50_Q6CW90 Cluster: Similarities with sp|O94085 Saccharomyc... 85 1e-15
UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=... 85 1e-15
UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=... 83 4e-15
UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1; Methan... 75 9e-13
UniRef50_A3H9G5 Cluster: Ribosomal protein L10; n=1; Caldivirga ... 74 2e-12
UniRef50_Q8ZTT3 Cluster: Acidic ribosomal protein P0 homolog; n=... 72 8e-12
UniRef50_A7DRL3 Cluster: Ribosomal protein L10; n=1; Candidatus ... 71 1e-11
UniRef50_P15826 Cluster: Acidic ribosomal protein P0 homolog; n=... 69 6e-11
UniRef50_A0RX06 Cluster: Ribosomal protein L10; n=1; Cenarchaeum... 67 3e-10
UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4; Methanomicr... 64 2e-09
UniRef50_P96039 Cluster: Acidic ribosomal protein P0 homolog; n=... 64 2e-09
UniRef50_Q2Y4X9 Cluster: Acidic ribosomal protein P0; n=1; uncul... 64 2e-09
UniRef50_Q7R447 Cluster: GLP_254_32992_33747; n=1; Giardia lambl... 62 7e-09
UniRef50_A1RWQ2 Cluster: Ribosomal protein L10; n=1; Thermofilum... 61 2e-08
UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, wh... 60 4e-08
UniRef50_A5C7V3 Cluster: Putative uncharacterized protein; n=2; ... 60 4e-08
UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1; ... 60 4e-08
UniRef50_Q7K1Q7 Cluster: LD47064p; n=7; Endopterygota|Rep: LD470... 58 1e-07
UniRef50_A3DNI2 Cluster: Ribosomal protein L10; n=1; Staphylothe... 58 2e-07
UniRef50_UPI00015BB116 Cluster: LSU ribosomal protein L10P; n=1;... 55 1e-06
UniRef50_Q7S302 Cluster: mRNA turnover protein 4 homolog; n=17; ... 54 2e-06
UniRef50_Q5BY73 Cluster: SJCHGC01801 protein; n=1; Schistosoma j... 54 3e-06
UniRef50_Q4Q0U9 Cluster: 60S acidic ribosomal protein, putative;... 53 5e-06
UniRef50_Q0W051 Cluster: 50S ribosomal protein L10E; n=1; uncult... 53 5e-06
UniRef50_Q74N82 Cluster: NEQ091; n=1; Nanoarchaeum equitans|Rep:... 52 7e-06
UniRef50_Q8PY51 Cluster: Acidic ribosomal protein P0 homolog; n=... 52 1e-05
UniRef50_A4S8Z4 Cluster: Predicted protein; n=2; Ostreococcus|Re... 50 3e-05
UniRef50_A0B921 Cluster: Ribosomal protein L10; n=1; Methanosaet... 50 3e-05
UniRef50_UPI0000ECA2B0 Cluster: mRNA turnover protein 4 homolog.... 50 4e-05
UniRef50_Q19302 Cluster: Putative uncharacterized protein; n=2; ... 50 4e-05
UniRef50_Q9USZ6 Cluster: mRNA turnover protein 4 homolog; n=1; S... 49 7e-05
UniRef50_O28781 Cluster: Acidic ribosomal protein P0 homolog; n=... 49 9e-05
UniRef50_A7PSP2 Cluster: Chromosome chr6 scaffold_28, whole geno... 45 0.001
UniRef50_Q4PHU5 Cluster: Putative uncharacterized protein; n=1; ... 40 0.031
UniRef50_A3ZT33 Cluster: Protein disulfide-isomerase-like protei... 34 2.7
UniRef50_Q756T1 Cluster: AER172Cp; n=1; Eremothecium gossypii|Re... 34 2.7
UniRef50_Q58J68 Cluster: Mitochondrial SBP40; n=1; Solanum tuber... 33 4.7
UniRef50_Q3SDA4 Cluster: Mini antigen; n=1; Paramecium tetraurel... 33 4.7
UniRef50_Q4TAP6 Cluster: Chromosome undetermined SCAF7271, whole... 33 6.2
UniRef50_UPI000150A24A Cluster: hypothetical protein TTHERM_0050... 32 8.2
UniRef50_UPI00005874CE Cluster: PREDICTED: similar to OTTHUMP000... 32 8.2
UniRef50_A5BI07 Cluster: Putative uncharacterized protein; n=6; ... 32 8.2
>UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Homo
sapiens (Human)
Length = 317
Score = 269 bits (660), Expect = 3e-71
Identities = 125/161 (77%), Positives = 143/161 (88%)
Frame = +1
Query: 88 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 267
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 268 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 447
MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 448 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHIL 570
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLI 161
>UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Danio
rerio (Zebrafish) (Brachydanio rerio)
Length = 319
Score = 264 bits (648), Expect = 8e-70
Identities = 123/161 (76%), Positives = 142/161 (88%)
Frame = +1
Query: 88 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 267
M RED+ATWKSNYF+KIIQLLD++PKCFIVGADNVGS+QMQ IR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDFPKCFIVGADNVGSKQMQTIRLSLRGKAVVLMGKNTM 60
Query: 268 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 447
MRKAI+ HLE NPALE+LLPHI+GNVGFVFT+ DL +VRD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALERLLPHIRGNVGFVFTKEDLTEVRDLLLANKVPAAARAGAIAPCE 120
Query: 448 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHIL 570
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLI 161
>UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3;
Metazoa|Rep: 60S acidic ribosomal protein P0 - Suberites
domuncula (Sponge)
Length = 313
Score = 241 bits (589), Expect = 1e-62
Identities = 107/161 (66%), Positives = 136/161 (84%)
Frame = +1
Query: 88 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 267
MGREDKA WKSNY ++++ L DEY + +V DNVGS+QMQQIRISLRG + +LMGKNT
Sbjct: 1 MGREDKAAWKSNYVMRLLSLFDEYKRVLLVNVDNVGSKQMQQIRISLRGKATILMGKNTT 60
Query: 268 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 447
+RKA++ HLE NP LEK+LPH+KGN+GFVFT D+VD+R+ +L N+V APA+ GAIAP+
Sbjct: 61 IRKALRGHLEQNPNLEKVLPHVKGNIGFVFTHEDMVDIREIMLSNQVGAPAKAGAIAPVD 120
Query: 448 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHIL 570
V +PA NTGLGPEKTSFFQALSI TKIS+GTIEI+++VH++
Sbjct: 121 VFVPASNTGLGPEKTSFFQALSIATKISRGTIEILSEVHLI 161
>UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10;
Eukaryota|Rep: 60S acidic ribosomal protein P0-3 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 323
Score = 177 bits (430), Expect = 2e-43
Identities = 86/163 (52%), Positives = 117/163 (71%), Gaps = 2/163 (1%)
Frame = +1
Query: 88 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 267
M + KA K Y K+ QL+DEY + +V ADNVGS Q+Q IR LRG S+VLMGKNTM
Sbjct: 1 MVKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTM 60
Query: 268 MRKAIKDHLET--NPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAP 441
M+++++ H E N A+ LLP ++GNVG +FT+GDL +V +++ + KV APAR G +AP
Sbjct: 61 MKRSVRIHSENSGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAP 120
Query: 442 LSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHIL 570
+ VV+ NTGL P +TSFFQ L+IPTKI+KGT+EII V ++
Sbjct: 121 IDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELI 163
>UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: 60S acidic
ribosomal protein P0 - Entamoeba histolytica HM-1:IMSS
Length = 316
Score = 175 bits (425), Expect = 8e-43
Identities = 84/161 (52%), Positives = 114/161 (70%)
Frame = +1
Query: 88 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 267
+ +E K K Y VK+ +LL+EY + +V DNVGS Q Q IR LRG +MGKNT+
Sbjct: 8 LSKEQKKAKKEAYLVKMKKLLEEYKQVVVVKCDNVGSSQFQTIRKELRGTCEFVMGKNTL 67
Query: 268 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 447
+RKAIK+ ET P LE+LLPHIKGNVGF+FT+GDL ++ KL E K +PA+ G IAP
Sbjct: 68 IRKAIKNQAETQPELEELLPHIKGNVGFIFTKGDLYQLKAKLTELKAPSPAKAGVIAPND 127
Query: 448 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHIL 570
V++PA +TGL P +T+F QAL+I +KI+KG IEI ++ ++
Sbjct: 128 VIVPAGDTGLDPTQTNFVQALNIASKITKGQIEITSETLLI 168
>UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27;
Eukaryota|Rep: 60S acidic ribosomal protein P0-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 317
Score = 171 bits (417), Expect = 7e-42
Identities = 84/158 (53%), Positives = 114/158 (72%), Gaps = 2/158 (1%)
Frame = +1
Query: 103 KATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI 282
KA K Y K+ QLL+EY + +V ADNVGS Q+Q IR LRG S+VLMGKNTMM++++
Sbjct: 7 KAEKKIVYDSKLCQLLNEYSQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMKRSV 66
Query: 283 KDHLET--NPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVI 456
+ H + N A LLP ++GNVG +FT+GDL +V +++ + KV APAR G +AP+ VV+
Sbjct: 67 RIHADKTGNQAFLSLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVV 126
Query: 457 PAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHIL 570
NTGL P +TSFFQ L+IPTKI+KGT+EII V ++
Sbjct: 127 QPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELI 164
>UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14;
Apicomplexa|Rep: 60S acidic ribosomal protein P0 -
Plasmodium falciparum (isolate 7G8)
Length = 316
Score = 153 bits (372), Expect = 2e-36
Identities = 78/162 (48%), Positives = 105/162 (64%), Gaps = 1/162 (0%)
Frame = +1
Query: 88 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 267
M + K K Y K+ L+ +Y K IV DNVGS QM +R SLRG + +LMGKNT
Sbjct: 1 MAKLSKQQKKQMYIEKLSSLIQQYSKILIVHVDNVGSNQMASVRKSLRGKATILMGKNTR 60
Query: 268 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQA-PARPGAIAPL 444
+R A+K +L+ P +EKLLP +K N+GFVF + DL ++R+ +L+NK + PAR G IAP+
Sbjct: 61 IRTALKKNLQAVPQIEKLLPLVKLNMGFVFCKDDLSEIRNIILDNKSSSHPARLGVIAPI 120
Query: 445 SVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHIL 570
V IP TG+ P TSF ++L I TKI KG IEI VH++
Sbjct: 121 DVFIPPGPTGMDPSHTSFLESLGISTKIVKGQIEIQEHVHLI 162
>UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2;
Dictyostelium discoideum|Rep: 60S acidic ribosomal
protein P0 - Dictyostelium discoideum (Slime mold)
Length = 305
Score = 132 bits (320), Expect = 4e-30
Identities = 65/152 (42%), Positives = 96/152 (63%)
Frame = +1
Query: 115 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHL 294
K + K +L Y K + AD VGS Q+Q+IR S+RG VLMGK TM+RK I+D
Sbjct: 9 KKLFIEKATKLFTTYDKMIVAEADFVGSSQLQKIRKSIRGIGAVLMGKKTMIRKVIRDLA 68
Query: 295 ETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTG 474
++ P L+ L ++K N +F + ++ +V+ + +V APA+ G AP V+IPA TG
Sbjct: 69 DSKPELDALNTYLKQNTCIIFCKDNIAEVKRVINTQRVGAPAKAGVFAPNDVIIPAGPTG 128
Query: 475 LGPEKTSFFQALSIPTKISKGTIEIINDVHIL 570
+ P +TSF Q L I TKI++G I+I+N+VHI+
Sbjct: 129 MEPTQTSFLQDLKIATKINRGQIDIVNEVHII 160
>UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6;
Paramecium tetraurelia|Rep: 60S acidic ribosomal protein
P0 - Paramecium tetraurelia
Length = 323
Score = 121 bits (291), Expect = 1e-26
Identities = 69/179 (38%), Positives = 102/179 (56%), Gaps = 18/179 (10%)
Frame = +1
Query: 88 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIR-ISLRGHSIVLMGKNT 264
MG+++ K F KI +LL +Y + IVG NVGS+Q+Q IR I + ++++++GKNT
Sbjct: 1 MGKKETKDKKPTQFKKIYELLSKYTQVIIVGLANVGSKQVQDIRRILAKRNALLVIGKNT 60
Query: 265 MMRKAIKDHLETNPA-----------------LEKLLPHIKGNVGFVFTRGDLVDVRDKL 393
+ +K + ++ P L+ L + G VGF+FT + D++ +
Sbjct: 61 LFKKVLATRVQELPKEHEYYEDLAKFGSAIKELDALKNSVAGKVGFIFTDTPVFDLKPII 120
Query: 394 LENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHIL 570
ENKV+ PAR GA+AP+ VVIP TG+ P FF AL IPTKI KG I+I D +L
Sbjct: 121 EENKVETPARVGAVAPIDVVIPPGPTGMDPASIQFFHALQIPTKIEKGQIQITKDFVVL 179
>UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1;
Eufolliculina uhligi|Rep: 60S acidic ribosomal protein
P0 - Eufolliculina uhligi
Length = 324
Score = 117 bits (282), Expect = 2e-25
Identities = 67/169 (39%), Positives = 101/169 (59%), Gaps = 17/169 (10%)
Frame = +1
Query: 115 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHL 294
K +Y+ K+ L++E P+ I A+NVGS+Q+Q +R LR + +L GKNT++R +K L
Sbjct: 3 KYDYWEKLWTLIEEAPRILICEANNVGSKQLQDLRRVLRNKATILFGKNTLIRAGLKHRL 62
Query: 295 -ETN----------------PALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPAR 423
E N P LE L+P ++GNV +F ++ +V + E+KV A A+
Sbjct: 63 TEPNAEDEDFEKRKNTWTPKPELEHLIPLLRGNVCLIFCHAEMGEVLSAVEESKVPAEAK 122
Query: 424 PGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHIL 570
G IAP V + TG+ P +TSFFQAL I TKI KG I+I+N++H++
Sbjct: 123 AGTIAPNDVHVYPGPTGMDPSQTSFFQALGIFTKIVKGQIDIVNELHLI 171
>UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1;
Giardia lamblia ATCC 50803|Rep: 60S acidic ribosomal
protein P0 - Giardia lamblia ATCC 50803
Length = 326
Score = 117 bits (281), Expect = 2e-25
Identities = 66/156 (42%), Positives = 95/156 (60%)
Frame = +1
Query: 103 KATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI 282
K + Y K+ + L EY K +V DNV S Q+ QIR LRG + +L GKNT++++ I
Sbjct: 9 KQARRQAYVAKLERCLTEYKKIVLVSVDNVRSFQIAQIRRLLRGKAELLAGKNTIIKRVI 68
Query: 283 KDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPA 462
+ L+ + L+ LLP+IK NV FVFT GD + + K +A A+ G +AP VVI
Sbjct: 69 -NQLDDDK-LKNLLPYIKLNVAFVFTNGDTSAILKAFKKTKRKAAAKAGIVAPADVVIEP 126
Query: 463 HNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHIL 570
T GP++ F+ AL I TKI+KG IEI+N V+++
Sbjct: 127 MLTQSGPDQHGFYAALGIDTKINKGKIEIVNPVNLI 162
>UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12;
Trypanosomatidae|Rep: 60S acidic ribosomal protein P0 -
Trypanosoma cruzi
Length = 323
Score = 115 bits (277), Expect = 7e-25
Identities = 65/161 (40%), Positives = 96/161 (59%), Gaps = 9/161 (5%)
Frame = +1
Query: 115 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHL 294
K Y + L +Y + DNV SQQ+ +R LRG ++MGK T+ +K ++
Sbjct: 8 KREYEERFNGCLTKYGRVLFCLMDNVRSQQVHDVRRDLRGLGELVMGKKTLQKKIVERRA 67
Query: 295 ETNPA--LEKLLPH-------IKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 447
E A +KLL + + GN +FT ++ + L +++VQAPAR GAIAP
Sbjct: 68 EDKKASAYDKLLYNTCIEKKLLCGNTALIFTNEEIPVITAVLDKHRVQAPARVGAIAPCD 127
Query: 448 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHIL 570
V++PA NTG+ P+ TSFFQAL+I TKI+KGT+EI++D +L
Sbjct: 128 VIVPAGNTGMEPKATSFFQALNIATKIAKGTVEIVSDKKVL 168
>UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4;
Euplotes|Rep: 60S acidic ribosomal protein P0 - Euplotes
minuta
Length = 333
Score = 114 bits (275), Expect = 1e-24
Identities = 64/179 (35%), Positives = 107/179 (59%), Gaps = 18/179 (10%)
Frame = +1
Query: 88 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGH-SIVLMGKNT 264
M +DK K+ +F ++ + D+Y + +V DN+ ++Q+ R LR + S++LMG+NT
Sbjct: 1 MAGKDKKAKKNEFFERVYNVFDKYTRALLVKCDNISARQIHACRKELRSNNSLMLMGENT 60
Query: 265 MMRKAIKDHL------ETN-----------PALEKLLPHIKGNVGFVFTRGDLVDVRDKL 393
+++ A++ + E++ P +E L+ +KGN+G +FT DL D++D +
Sbjct: 61 LIKAALQKRISKPIESESDFEERSKTWTPIPHMEPLVRLLKGNLGIIFTNHDLTDIKDII 120
Query: 394 LENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHIL 570
+ +APAR G++A V I A TGL P++T+FFQ L+IPTKI+K IEI D I+
Sbjct: 121 DRHTREAPARVGSVAQCDVWIKAGGTGLDPKQTAFFQNLAIPTKIAKAQIEISADKQII 179
>UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2;
Tetrahymena thermophila|Rep: 60S acidic ribosomal
protein P0 - Tetrahymena thermophila SB210
Length = 324
Score = 109 bits (262), Expect = 4e-23
Identities = 64/172 (37%), Positives = 96/172 (55%), Gaps = 16/172 (9%)
Frame = +1
Query: 100 DKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKA 279
DK K + + +LL +Y + +NVGS Q+QQIR SL ++I+++GKNT++RKA
Sbjct: 7 DKKAKKDAFIRRFYELLSKYDSIALCTLENVGSLQLQQIRRSLGSNNIMVIGKNTVVRKA 66
Query: 280 IK---DHLETN-------------PALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQ 411
++ L T+ P L L+PH+K + +VF + ++ K+ V
Sbjct: 67 VQLKSADLPTDSKYDWYRQFGAPKPQLASLIPHLKNKIAYVFHNDPIFALKPKIESFVVP 126
Query: 412 APARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHI 567
APAR G +A V+IP TG+ P + +FF ALSI TKI KG IEI +V +
Sbjct: 127 APARVGTVAQKDVMIPPGPTGMDPSQINFFHALSISTKIQKGQIEITKEVQV 178
>UniRef50_Q8TX50 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Methanopyrus kandleri
Length = 357
Score = 103 bits (248), Expect = 2e-21
Identities = 60/163 (36%), Positives = 89/163 (54%), Gaps = 3/163 (1%)
Frame = +1
Query: 79 QSKMGREDK-ATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGH-SIVLM 252
Q G E K A WK ++ +L+DEY +V + + + Q+Q+IR LR +I+ M
Sbjct: 8 QPPSGYEPKVAEWKRREVKELKELMDEYENVGLVDLEGIPAPQLQEIRAKLRERDTIIRM 67
Query: 253 GKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGA 432
+NT+MR A+++ L+ P LE LL +I+G V F+FT D + L E+K APA+PG
Sbjct: 68 SRNTLMRIALEEKLDERPELEPLLDYIEGPVAFIFTNLDPFKLYKLLEESKASAPAKPGD 127
Query: 433 IAPLSVVIPAHNTGLGPEK-TSFFQALSIPTKISKGTIEIIND 558
IAP +V+P T P S Q +P +I G + I D
Sbjct: 128 IAPEDIVVPEGPTPFEPGPIVSELQQAGLPAQIQDGKVVITKD 170
>UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1;
Encephalitozoon cuniculi|Rep: 60S ACIDIC RIBOSOMAL
PROTEIN P0 - Encephalitozoon cuniculi
Length = 290
Score = 103 bits (246), Expect = 4e-21
Identities = 60/166 (36%), Positives = 97/166 (58%)
Frame = +1
Query: 73 FTQSKMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLM 252
F M R+D K + + +L + Y + +V +NV S Q++ I+ G++ +LM
Sbjct: 20 FFHPGMTRKDAKERKELTYERARKLFETYSRFALVKIENVVSTQLKDIKRQWGGNAELLM 79
Query: 253 GKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGA 432
GKN+ +R+AI D P L + +KG+V FVF +G+ D++ + EN +A A+ G
Sbjct: 80 GKNSAIRRAIADL--GKPELSGVYDLVKGDVCFVFFKGNARDIKKAIDENVREACAKVGN 137
Query: 433 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHIL 570
+A V + + TG+ P+KTS+FQAL I TKI+KG +EII+ +L
Sbjct: 138 VAQRDVWVESCITGMTPDKTSYFQALGIATKITKGKVEIISPYKVL 183
>UniRef50_O94085 Cluster: Putative uncharacterized protein YLR339C;
n=5; Saccharomycetales|Rep: Putative uncharacterized
protein YLR339C - Saccharomyces cerevisiae (Baker's
yeast)
Length = 183
Score = 102 bits (244), Expect = 7e-21
Identities = 62/139 (44%), Positives = 72/139 (51%)
Frame = -2
Query: 542 IVPFEILVGMERAWKKEVFSGPRPVL*AGMTTDNGAMAPGRAGAWTLFSNSLSRTSTRSP 363
+VP ILVG +AWKKEV G PVL A +GA AP AGA TL S
Sbjct: 1 MVPLAILVGTPKAWKKEVLPGSIPVLTALTQMSSGATAPALAGAATLLETITFLISVNGS 60
Query: 362 RVKTKPTFPLM*GSSFSRAGFVSRWSLMAFLIMVFLPMSTML*PRNEXXXXXXXCEPTLS 183
VKTKPT PL G++FS++G + LMA L MVFLP+ T P N E TLS
Sbjct: 61 LVKTKPTLPLTKGNNFSKSGKSDKKPLMALLTMVFLPIKTTALPLNSFLTSCICWEETLS 120
Query: 182 APTMKHFGYSSNSWMILTK 126
PT YSS + L K
Sbjct: 121 TPTTNKDLYSSKYSLNLAK 139
>UniRef50_Q98S65 Cluster: 60S acidic ribosomal protein P0; n=1;
Guillardia theta|Rep: 60S acidic ribosomal protein P0 -
Guillardia theta (Cryptomonas phi)
Length = 297
Score = 101 bits (243), Expect = 9e-21
Identities = 51/152 (33%), Positives = 87/152 (57%)
Frame = +1
Query: 115 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHL 294
KS F K L ++ + +V +N+ S+Q+++ + L SI++ GKNT+++K ++D L
Sbjct: 9 KSLVFKKFNFLFSKFSRLIVVKIENLNSEQIKKCKRLLNNTSILITGKNTLIKKVLRDRL 68
Query: 295 ETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTG 474
+ + ++L I GNV F+FT D +++ L N + A+ G +A V + T
Sbjct: 69 KNSTLSNEILTKINGNVSFIFTNEDPFFIQEILKNNSLPTAAKIGQVAQSDVYLSQGLTN 128
Query: 475 LGPEKTSFFQALSIPTKISKGTIEIINDVHIL 570
+ P+ FQ+L+IPTKI KG IEII + +L
Sbjct: 129 ISPDGIGIFQSLNIPTKILKGQIEIITNFKVL 160
>UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6;
Trichomonas vaginalis G3|Rep: 60S acidic ribosomal
protein P0 - Trichomonas vaginalis G3
Length = 318
Score = 97.5 bits (232), Expect = 2e-19
Identities = 52/153 (33%), Positives = 81/153 (52%), Gaps = 1/153 (0%)
Frame = +1
Query: 115 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSI-VLMGKNTMMRKAIKDH 291
K +Y K+ L +Y K +V + NV + Q+ IR L H VL GKN++MR+A+
Sbjct: 11 KLDYVTKLHALFRKYHKVVVVTSMNVTANQLLNIRAGLAEHGCEVLFGKNSLMRRAVDQL 70
Query: 292 LETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 471
E P + +L H+ G +FT G+ ++D + N + + A+ GAIAP V++ T
Sbjct: 71 KEELPGIRQLEEHLYHGAGLIFTNGNFKAIKDVIDANCLGSAAKVGAIAPCDVILQPQRT 130
Query: 472 GLGPEKTSFFQALSIPTKISKGTIEIINDVHIL 570
+ P AL+I KI KGTIEI + ++
Sbjct: 131 SMSPNDIKILHALNIQCKIFKGTIEITGEKQLI 163
>UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protein;
n=2; Culicidae|Rep: Temporarily assignedprotein name
protein - Aedes aegypti (Yellowfever mosquito)
Length = 1309
Score = 70.1 bits (164), Expect(2) = 3e-17
Identities = 32/46 (69%), Positives = 39/46 (84%)
Frame = +1
Query: 271 RKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKV 408
++AI+ HLE N L KLLPHIK VGFVFT+GDLV+VRDKL+E+KV
Sbjct: 692 QQAIRVHLEVNSDLRKLLPHIKSYVGFVFTKGDLVEVRDKLMESKV 737
Score = 40.3 bits (90), Expect(2) = 3e-17
Identities = 20/22 (90%), Positives = 20/22 (90%)
Frame = +1
Query: 505 ALSIPTKISKGTIEIINDVHIL 570
ALSIP KISKGTIEIINDV IL
Sbjct: 738 ALSIPIKISKGTIEIINDVPIL 759
>UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiella
natans|Rep: Ribosomal protein L10 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 251
Score = 87.4 bits (207), Expect = 2e-16
Identities = 46/143 (32%), Positives = 78/143 (54%)
Frame = +1
Query: 133 KIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPAL 312
K I LL+ Y IV +N+ S+Q+ IR LRG S +++GK + + ++++
Sbjct: 11 KFISLLNSYDTMVIVNMNNIRSKQIHDIRKHLRGTSEIVVGKKSFLSYLLQNNKLEMSRW 70
Query: 313 EKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKT 492
+ ++ N+G +FT +L + + + + + G IA +++I L P +T
Sbjct: 71 MSVKEYLSDNIGLIFTNSNLKILNETFKQYFLTSFVNAGEIAQRNIIIKKGIKNLSPSQT 130
Query: 493 SFFQALSIPTKISKGTIEIINDV 561
FFQAL IPT+ISK +IEII D+
Sbjct: 131 PFFQALGIPTRISKSSIEIIEDI 153
>UniRef50_Q6CW90 Cluster: Similarities with sp|O94085 Saccharomyces
cerevisiae YLR339CP; n=1; Kluyveromyces lactis|Rep:
Similarities with sp|O94085 Saccharomyces cerevisiae
YLR339CP - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 309
Score = 84.6 bits (200), Expect = 1e-15
Identities = 50/140 (35%), Positives = 70/140 (50%)
Frame = -1
Query: 567 DMDIIDNFNSTL*NLSGDGKSLEERSLLRTKASVMSGNDDRQWSNGSRTSRGLDFVLQQF 388
D+++ DNFN T NL + +SLEERSL V N D W N + + + V
Sbjct: 167 DLNVRDNFNGTSGNLGWNTQSLEERSLTWFHTGVDGENPDIFWGNSTSSGWSGNLVGDDD 226
Query: 387 ITHINKISTGEDKANISLDVRKQFFESWICFKMVLDGFPHHGVFAHEHNAVTTQ*NTDLL 208
I + GED+ N++LD R+Q F W D HGV H+ N+ +Q +D +
Sbjct: 227 FLDILQGIVGEDETNVTLDERQQLFVVWEVRDETSDSSSDHGVLTHQDNSSASQVLSDFV 286
Query: 207 HLLRAYIVRTHYETFWVFVQ 148
HLL +IV T+ E VF Q
Sbjct: 287 HLLGRHIVNTNNEDRLVFFQ 306
>UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Halobacteriaceae|Rep: Acidic ribosomal protein P0
homolog - Halobacterium salinarium (Halobacterium
halobium)
Length = 352
Score = 84.6 bits (200), Expect = 1e-15
Identities = 42/155 (27%), Positives = 81/155 (52%), Gaps = 1/155 (0%)
Frame = +1
Query: 97 EDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRK 276
E+ WK +++ LL+ Y +V + S+Q+Q +R L G + + M +NT++ +
Sbjct: 10 EEVPEWKRQEVAELVDLLETYDSVGVVNVTGIPSKQLQDMRRGLHGQAALRMSRNTLLVR 69
Query: 277 AIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVI 456
A++ E L+ L +++G VG V T + + +L +K AP G +AP +V+
Sbjct: 70 ALE---EAGDGLDTLTEYVEGEVGLVATNDNPFGLYQQLENSKTPAPINAGEVAPNDIVV 126
Query: 457 PAHNTGLGPEK-TSFFQALSIPTKISKGTIEIIND 558
P +TG+ P Q + +I +G+I++++D
Sbjct: 127 PEGDTGIDPGPFVGELQTIGANARIQEGSIQVLDD 161
>UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=8;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Pyrococcus horikoshii
Length = 342
Score = 83.0 bits (196), Expect = 4e-15
Identities = 51/159 (32%), Positives = 82/159 (51%), Gaps = 4/159 (2%)
Frame = +1
Query: 106 ATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVL-MGKNTMMRKAI 282
A WK ++ +L+ YP +V ++ + + Q+R +R + +L + +NT++ AI
Sbjct: 5 AEWKKKEVEELAKLIKSYPVIALVDVSSMPAYPLSQMRRLIRENGGLLRVSRNTLIELAI 64
Query: 283 KDHLET--NPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVI 456
K + P LEKL+ +I G + T + + L +N+ APA+PGA+ P VV+
Sbjct: 65 KKAAKELGKPELEKLVEYIDRGAGILVTNMNPFKLYKFLQQNRQPAPAKPGAVVPKDVVV 124
Query: 457 PAHNTGLGPEK-TSFFQALSIPTKISKGTIEIINDVHIL 570
PA T L P QAL IP +I KG + I D +L
Sbjct: 125 PAGPTPLAPGPIVGQMQALGIPARIEKGKVTIQKDTTVL 163
>UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1;
Methanosphaera stadtmanae DSM 3091|Rep: 50S ribosomal
protein L10P - Methanosphaera stadtmanae (strain DSM
3091)
Length = 332
Score = 75.4 bits (177), Expect = 9e-13
Identities = 44/156 (28%), Positives = 83/156 (53%), Gaps = 1/156 (0%)
Frame = +1
Query: 106 ATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIK 285
A WK ++ L + + IV ++ ++Q+Q +R SL ++I+ M + ++ A++
Sbjct: 5 ADWKKEKVAELEDLTNSHEIIGIVNLADIPAKQLQTMRKSLGDNAILKMSRKNFIKIALE 64
Query: 286 DHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAH 465
+ +E L +++G VFT+ + + L ++K +APA+ G+IAP +V+PA
Sbjct: 65 N--SDKEEVEGLADYLEGQPAMVFTKMNPFKLFKILEDSKTEAPAKAGSIAPADIVVPAG 122
Query: 466 NTGLGPEK-TSFFQALSIPTKISKGTIEIINDVHIL 570
+T P Q + IP KI KG+I + +D I+
Sbjct: 123 DTSFPPGPILGELQQVGIPAKIDKGSIVVTDDAKIV 158
>UniRef50_A3H9G5 Cluster: Ribosomal protein L10; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L10 -
Caldivirga maquilingensis IC-167
Length = 303
Score = 74.1 bits (174), Expect = 2e-12
Identities = 43/155 (27%), Positives = 77/155 (49%), Gaps = 3/155 (1%)
Frame = +1
Query: 112 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDH 291
WK ++ +L+ ++ I + + + Q R LRGH +V + +N + A++
Sbjct: 21 WKVKVLKELEELIKKHSVIMIFDLRELPASMLHQYRRVLRGHGVVKVFRNKLFLIALRRI 80
Query: 292 L--ETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAH 465
N +EK ++ G GF+FT + D+ +++N V+ A+PG + +++PA
Sbjct: 81 YGDSVNAEIEK---YLSGENGFIFTNENPFDLYRIIVDNSVRRYAKPGDVLQSDIIVPAG 137
Query: 466 NTGLGPEKT-SFFQALSIPTKISKGTIEIINDVHI 567
NTG+ P S F L IPT+I G I + D +
Sbjct: 138 NTGINPGPVLSRFSKLKIPTQIRDGKIWVARDTQV 172
>UniRef50_Q8ZTT3 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Pyrobaculum|Rep: Acidic ribosomal protein P0 homolog -
Pyrobaculum aerophilum
Length = 345
Score = 72.1 bits (169), Expect = 8e-12
Identities = 44/140 (31%), Positives = 71/140 (50%), Gaps = 1/140 (0%)
Frame = +1
Query: 142 QLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKL 321
+LL +YP F+ + S+ + + R LR + ++ + K T+ + A PA ++
Sbjct: 29 ELLQKYPYVFLFDLHGLSSRILHEYRYRLRRYGVIKIIKPTLFKIAFTKVYGGIPA--EI 86
Query: 322 LPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSF 498
++G VGF FT + +V + EN V+ A+PG AP +V+PA T P S
Sbjct: 87 AEKVRGEVGFFFTSFNPAEVIKIVAENSVRRAAQPGDKAPFDIVVPAGPTNASPGPIISK 146
Query: 499 FQALSIPTKISKGTIEIIND 558
F L IPT++ +G I I D
Sbjct: 147 FGKLKIPTRVQEGKIWIAKD 166
>UniRef50_A7DRL3 Cluster: Ribosomal protein L10; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L10
- Candidatus Nitrosopumilus maritimus SCM1
Length = 288
Score = 71.3 bits (167), Expect = 1e-11
Identities = 48/150 (32%), Positives = 79/150 (52%), Gaps = 2/150 (1%)
Frame = +1
Query: 115 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHL 294
K+ + ++ +L +Y I+ + V S Q+ +R +L+ K+ + +KA+++
Sbjct: 12 KTQMYQQLQELPKKYKVMAIIKMNKVRSTQILPLRKTLKDDVEFFSVKDKVAQKALEN-- 69
Query: 295 ETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTG 474
P ++ ++ KG V +FT + L +NK+ AR G IA + VV+PA NTG
Sbjct: 70 SDIPGMKDMIGEFKGQVMIMFTNMSPFKLNVLLAKNKIMMMARGGDIASVDVVVPAKNTG 129
Query: 475 L--GPEKTSFFQALSIPTKISKGTIEIIND 558
+ GP T F +A IPTKI +GTI I D
Sbjct: 130 IAPGPMLTEFKEA-GIPTKIDQGTIWIAKD 158
>UniRef50_P15826 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Methanococcus|Rep: Acidic ribosomal protein P0 homolog -
Methanococcus vannielii
Length = 336
Score = 69.3 bits (162), Expect = 6e-11
Identities = 45/154 (29%), Positives = 76/154 (49%), Gaps = 3/154 (1%)
Frame = +1
Query: 106 ATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIK 285
A WK + +LL ++ V + Q+Q+IR +R + M +NT++++A++
Sbjct: 11 APWKIEEVNALKELLKSANVIALIDMMEVPAVQLQEIRDKIRDQMTLKMSRNTLIKRAVE 70
Query: 286 DHLET--NPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIP 459
+ E NP KL+ ++ V T + + L E+K AP + GAIAP + +
Sbjct: 71 EVAEETGNPEFAKLVDYLDKGAAIVVTEMNPFKLFKTLEESKSPAPIKGGAIAPCDIEVK 130
Query: 460 AHNTGLGPEK-TSFFQALSIPTKISKGTIEIIND 558
+ +TG+ P S +A+ IP I KG I I D
Sbjct: 131 SGSTGMPPGPFLSELKAVGIPAAIDKGKIGIKED 164
>UniRef50_A0RX06 Cluster: Ribosomal protein L10; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L10 - Cenarchaeum
symbiosum
Length = 274
Score = 66.9 bits (156), Expect = 3e-10
Identities = 44/131 (33%), Positives = 68/131 (51%), Gaps = 2/131 (1%)
Frame = +1
Query: 172 IVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGF 351
+V +++ + Q+ +R LR K+ + RKA+ P ++K++ + G F
Sbjct: 17 LVRMESIRASQILPLRKKLRDSVSFFSIKDKVARKALAK--TDVPGMDKMMDQLTGQCMF 74
Query: 352 VFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL--GPEKTSFFQALSIPTK 525
+FT + L +NK AR G IA + V +PA NTG+ GP T F +A IPTK
Sbjct: 75 MFTDISPFTLNVLLKKNKTMMAARAGDIASIDVTVPAKNTGIAPGPMLTEFKEA-GIPTK 133
Query: 526 ISKGTIEIIND 558
I +GTI I+ D
Sbjct: 134 IDQGTIWILKD 144
>UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4;
Methanomicrobiales|Rep: Ribosomal protein L10 -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 346
Score = 64.5 bits (150), Expect = 2e-09
Identities = 42/147 (28%), Positives = 71/147 (48%), Gaps = 1/147 (0%)
Frame = +1
Query: 112 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDH 291
WK + +I + ++E+ +V + + Q+QQIR +LRG + V M +NT++ A+
Sbjct: 11 WKKDEVEEIKRGIEEHTLVGVVDMYGIPASQVQQIRRNLRGTARVKMARNTLIEHALN-- 68
Query: 292 LETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 471
E ++ L H +G +FT + + L + K + A+PG AP +VIP T
Sbjct: 69 -ELGGSVATLNDHAEGQSALIFTNENPFKLFKLLEKTKTKMAAKPGETAPEDIVIPKGPT 127
Query: 472 GLGPEK-TSFFQALSIPTKISKGTIEI 549
P Q + IP I G ++I
Sbjct: 128 SFKPGPIVGELQQVGIPAAIEGGKVKI 154
>UniRef50_P96039 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Sulfolobaceae|Rep: Acidic ribosomal protein P0 homolog -
Sulfolobus solfataricus
Length = 338
Score = 64.5 bits (150), Expect = 2e-09
Identities = 46/154 (29%), Positives = 78/154 (50%), Gaps = 3/154 (1%)
Frame = +1
Query: 106 ATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIK 285
A+WK ++ +L+ I + + ++ +IR LRG + + + KNT+ + A K
Sbjct: 14 ASWKLEEVKELTELIKNSNTILIGNLEGFPADKLHEIRKKLRGKATIKVTKNTLFKIAAK 73
Query: 286 DHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLEN-KVQAPARPGAIAPLSVVIPA 462
+ +EKL ++ G F+FT+ D + + EN K++ A PG A VVIPA
Sbjct: 74 N---AGIDIEKLEQYLTGPNVFIFTK-DNPFITNMFFENYKLRRYAMPGDKAEEEVVIPA 129
Query: 463 HNTGL--GPEKTSFFQALSIPTKISKGTIEIIND 558
+TG+ GP S F L + TK+ G + ++ D
Sbjct: 130 GDTGMPAGP-ILSVFGKLKVQTKVQDGKVHVVKD 162
>UniRef50_Q2Y4X9 Cluster: Acidic ribosomal protein P0; n=1;
uncultured archaeon|Rep: Acidic ribosomal protein P0 -
uncultured archaeon
Length = 313
Score = 64.1 bits (149), Expect = 2e-09
Identities = 40/147 (27%), Positives = 68/147 (46%), Gaps = 1/147 (0%)
Frame = +1
Query: 112 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDH 291
WK I LL Y + +GS+Q+Q+IR RG +++ + KN+M+ ++
Sbjct: 11 WKEEQVASINSLLGSYDTIGLAKIRGLGSKQLQRIRKEFRGDALLKVSKNSMIARSF--- 67
Query: 292 LETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 471
+ ++ I + +FT D + L + K+ AP + GA+AP+ +VI T
Sbjct: 68 --GGSGMNDMVDFIDDQMALIFTDLDAFALYKVLEKGKIPAPIKAGAVAPIDIVIEEGPT 125
Query: 472 GLGP-EKTSFFQALSIPTKISKGTIEI 549
L P Q L IP+ I G + +
Sbjct: 126 SLRPGPVVGELQNLGIPSGIDGGKVVV 152
>UniRef50_Q7R447 Cluster: GLP_254_32992_33747; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_254_32992_33747 - Giardia lamblia
ATCC 50803
Length = 251
Score = 62.5 bits (145), Expect = 7e-09
Identities = 46/159 (28%), Positives = 76/159 (47%), Gaps = 7/159 (4%)
Frame = +1
Query: 115 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHL 294
K +I + D Y +++ + N+ S QQ+R S++G++ + MGKN +MR A+
Sbjct: 33 KQEIIKQIREAFDTYDTVYVIDSHNMTSSSWQQLRTSMKGYARIFMGKNQLMRYALGKTE 92
Query: 295 ETNPALE--KLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHN 468
E + + +L +KG G +FT VR L AR G +A ++VIP
Sbjct: 93 EESYRTKTWQLGRLLKGMTGLLFTSAPEEKVRSALASVARPCLARGGDVATKTIVIP--Q 150
Query: 469 TGLGPEKTSF-----FQALSIPTKISKGTIEIINDVHIL 570
L +K SF + L +PT + I ++ D H+L
Sbjct: 151 GPLDRDKYSFALEPELRKLGLPTSLQNTVIHVLCD-HVL 188
>UniRef50_A1RWQ2 Cluster: Ribosomal protein L10; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L10 - Thermofilum
pendens (strain Hrk 5)
Length = 294
Score = 60.9 bits (141), Expect = 2e-08
Identities = 42/150 (28%), Positives = 74/150 (49%), Gaps = 2/150 (1%)
Frame = +1
Query: 115 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGH-SIVLMGKNTMMRKAIKDH 291
K+ ++ L +Y + + + ++ R LR S++ + KNT+ A+K+
Sbjct: 17 KAKLLEELSGYLKQYRYYMVASITGLPASVVKTSRSLLRSDGSLMKVVKNTIFLLALKN- 75
Query: 292 LETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 471
T +E + H++G +FT + ++ L + K+ AR G IA +V+PA NT
Sbjct: 76 --TGKYVEGIEEHLRGQNAVIFTNKNPFEILFFLDKQKIMREARAGDIATSEIVLPAGNT 133
Query: 472 GLGP-EKTSFFQALSIPTKISKGTIEIIND 558
G+ P S F L IPT++ +G+I I D
Sbjct: 134 GIPPGPMISNFNKLGIPTRVQEGSIWIAKD 163
>UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_55, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 223
Score = 60.1 bits (139), Expect = 4e-08
Identities = 31/80 (38%), Positives = 49/80 (61%)
Frame = +1
Query: 238 SIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAP 417
S+ M K+++ +A K NP L+P + GNVG +FT+GDL + +++ + KV AP
Sbjct: 38 SVFAMVKHSIRLRAEKTG---NPVFLNLVPLLVGNVGPIFTKGDLKEADEEVAKYKVGAP 94
Query: 418 ARPGAIAPLSVVIPAHNTGL 477
A G +A + V++P NTGL
Sbjct: 95 AHTGLVAHIDVIVPPGNTGL 114
>UniRef50_A5C7V3 Cluster: Putative uncharacterized protein; n=2;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 742
Score = 60.1 bits (139), Expect = 4e-08
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Frame = +1
Query: 193 GSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLET--NPALEKLLPHIKGNVGFVFTRG 366
G + + R +V + K + + + H E NP L+P + GNVG + T+G
Sbjct: 574 GGHSFYFLGLVFRVSFLVWLPKRLFSQHSSRLHAEKTGNPVFLNLVPLLVGNVGLISTKG 633
Query: 367 DLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL 477
DL +V ++ + KV APAR G ++ + V++P NTGL
Sbjct: 634 DLKEVDKEVAKYKVGAPARAGLVSHIDVIVPPGNTGL 670
>UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 208
Score = 60.1 bits (139), Expect = 4e-08
Identities = 27/59 (45%), Positives = 40/59 (67%)
Frame = +1
Query: 301 NPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL 477
NP L+P + GNVG +FT+GDL +V +++ + KV APAR G +A + V++P NT L
Sbjct: 15 NPVFLNLVPLLVGNVGPIFTKGDLKEVDEEVAKYKVGAPARTGLVAHIDVIVPPGNTXL 73
>UniRef50_Q7K1Q7 Cluster: LD47064p; n=7; Endopterygota|Rep: LD47064p
- Drosophila melanogaster (Fruit fly)
Length = 256
Score = 58.4 bits (135), Expect = 1e-07
Identities = 39/152 (25%), Positives = 67/152 (44%), Gaps = 3/152 (1%)
Frame = +1
Query: 112 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI--K 285
WK I + +YP F+ N+ + ++ +R L+ +S + GKN +M+ +
Sbjct: 22 WKQRIVDDIRFCVGKYPNIFVFQVQNMRNSLLKDLRQELKKNSRFIFGKNRVMQIGLGRT 81
Query: 286 DHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAH 465
E P L KL + G VG +FT +V + AR G +A +V +PA
Sbjct: 82 KSEEVEPELHKLSKRLTGQVGLLFTDKSKEEVLEWAENYWAVEYARSGFVATETVTLPAG 141
Query: 466 N-TGLGPEKTSFFQALSIPTKISKGTIEIIND 558
++L +PTK+ KG + + +D
Sbjct: 142 PLEDFAHSMEPHLRSLGLPTKLEKGIVTLYSD 173
>UniRef50_A3DNI2 Cluster: Ribosomal protein L10; n=1;
Staphylothermus marinus F1|Rep: Ribosomal protein L10 -
Staphylothermus marinus (strain ATCC 43588 / DSM 3639 /
F1)
Length = 338
Score = 57.6 bits (133), Expect = 2e-07
Identities = 43/150 (28%), Positives = 67/150 (44%), Gaps = 1/150 (0%)
Frame = +1
Query: 112 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDH 291
WK + L YP I + Q+Q++R L + + KN ++ +A+++
Sbjct: 15 WKIEEVEYLTTLFKSYPVFAIADLTGFPTNQLQKLRKKLSKKVLFRVSKNKLILRALRNA 74
Query: 292 LETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 471
E+LL G +FT + ++ L + K + +PG IA +VIP NT
Sbjct: 75 GIDTSKFEELLT---GQNLLLFTHMNAFELSLLLDKYKAKTYYKPGEIAQQEIVIPEGNT 131
Query: 472 GLGPEK-TSFFQALSIPTKISKGTIEIIND 558
GL P S F L IPT+I +I I D
Sbjct: 132 GLSPGPILSTFSKLKIPTRIQGNSIVITRD 161
>UniRef50_UPI00015BB116 Cluster: LSU ribosomal protein L10P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L10P - Ignicoccus hospitalis KIN4/I
Length = 346
Score = 54.8 bits (126), Expect = 1e-06
Identities = 42/157 (26%), Positives = 72/157 (45%), Gaps = 2/157 (1%)
Frame = +1
Query: 94 REDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGH-SIVLMGKNTMM 270
RE WK ++ + L E ++ + + + R R + + KN ++
Sbjct: 13 REKFPEWKVKLVNEVKEKLKENDVVLVLDLVETPANLVHKFRKKFRKELPYMKVIKNNLV 72
Query: 271 RKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSV 450
RKA + P +++ + G+ F+FT + + K+ + + APA+PG +A +
Sbjct: 73 RKAFEQSGIEMP--KEMDEQLVGSNMFIFTNDNPFKLALKISKFSMPAPAKPGDVAQSEI 130
Query: 451 VIPAHNTGLGPEK-TSFFQALSIPTKISKGTIEIIND 558
V+PA +TGL P S F L I T + GTI I D
Sbjct: 131 VVPAGDTGLTPGPILSTFGKLKIKTMVKGGTIHIAKD 167
>UniRef50_Q7S302 Cluster: mRNA turnover protein 4 homolog; n=17;
Ascomycota|Rep: mRNA turnover protein 4 homolog -
Neurospora crassa
Length = 252
Score = 54.0 bits (124), Expect = 2e-06
Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 2/118 (1%)
Frame = +1
Query: 115 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHL 294
K F I + + Y CF+ DN+ + ++ +R L I GK + +A+
Sbjct: 23 KEKLFENIRECIPNYQHCFVFSIDNMRNNYLKDVRKELNDCRI-FFGKTKLTARALGTTP 81
Query: 295 ETNPA--LEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPA 462
E A L+KL ++ G+VG +FT D +++D + AR G++A ++ IP+
Sbjct: 82 EDAQADGLDKLSKYLSGSVGLIFTNRDPSEIKDYFVNLTQVDFARAGSVATRTITIPS 139
>UniRef50_Q5BY73 Cluster: SJCHGC01801 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC01801 protein - Schistosoma
japonicum (Blood fluke)
Length = 236
Score = 53.6 bits (123), Expect = 3e-06
Identities = 40/151 (26%), Positives = 72/151 (47%), Gaps = 3/151 (1%)
Frame = +1
Query: 115 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI-KDH 291
K K+ Q LDEY + ++V N +Q++ +IR ++ + L G N + A+ K H
Sbjct: 17 KKQDVAKVRQYLDEYKRVYVVTLHNPRTQKVSEIRKNMPDIKL-LFGINKVTVWALGKTH 75
Query: 292 LET-NPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHN 468
++ P L L ++KG +FT+ ++R++L + RPGA A +V I +
Sbjct: 76 KDSYRPKLHHLCKYLKGQCALLFTKSSPSELREQLDAFRSAEYCRPGAPAEQTVRIASGP 135
Query: 469 TGLGPEKTS-FFQALSIPTKISKGTIEIIND 558
P + L +P K+ +G + + D
Sbjct: 136 LPKFPHTMEPVLRQLGMPVKLVRGVVHLERD 166
>UniRef50_Q4Q0U9 Cluster: 60S acidic ribosomal protein, putative;
n=5; Trypanosomatidae|Rep: 60S acidic ribosomal protein,
putative - Leishmania major
Length = 227
Score = 52.8 bits (121), Expect = 5e-06
Identities = 45/167 (26%), Positives = 71/167 (42%), Gaps = 3/167 (1%)
Frame = +1
Query: 76 TQSKMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMG 255
TQ+K REDK +I + L++Y + N+ + +QQIR G S + +G
Sbjct: 15 TQAKT-REDK----DKLIERIREALEDYSDVYTFQLHNIRTNILQQIREERAGDSRIFLG 69
Query: 256 KNTMMRKAIKDHLET--NPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPG 429
N +M AI E+ L KL P + G G +FT +V++ AR G
Sbjct: 70 NNKVMMIAIGRDEESAQRQNLHKLSPFLTGLCGLLFTNLSKKEVKEYFATVGAPVYARTG 129
Query: 430 AIAPLSVVIPAHNTGLGPEKT-SFFQALSIPTKISKGTIEIINDVHI 567
A S+V+ P L +P K+ +G I ++ D +
Sbjct: 130 QTATESLVLKGGPLPQFPHSMFDHLAKLGLPIKLDRGVIVLLQDTTV 176
>UniRef50_Q0W051 Cluster: 50S ribosomal protein L10E; n=1;
uncultured methanogenic archaeon RC-I|Rep: 50S ribosomal
protein L10E - Uncultured methanogenic archaeon RC-I
Length = 304
Score = 52.8 bits (121), Expect = 5e-06
Identities = 40/147 (27%), Positives = 65/147 (44%), Gaps = 1/147 (0%)
Frame = +1
Query: 112 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDH 291
WK + KI+ + + IV V + +Q++R +L G + M +NT+ A D
Sbjct: 16 WKKDEIKKIVDGVHSHKVVGIVDVRGVPADSLQKMRRNLLGKVEMRMVRNTLSTIAF-DS 74
Query: 292 LETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 471
L ++L ++ G + V+T + + L K + A+ G IAP +VIP T
Sbjct: 75 LPEGEKAKELAKYVDGQMLIVYTNDNPFKLYKLLNATKSKRAAKGGDIAPSDIVIPKGPT 134
Query: 472 GLGP-EKTSFFQALSIPTKISKGTIEI 549
P FQ + IP I G + I
Sbjct: 135 SFKPGPLVGEFQQVGIPAGIEGGKVVI 161
>UniRef50_Q74N82 Cluster: NEQ091; n=1; Nanoarchaeum equitans|Rep:
NEQ091 - Nanoarchaeum equitans
Length = 284
Score = 52.4 bits (120), Expect = 7e-06
Identities = 36/135 (26%), Positives = 69/135 (51%), Gaps = 2/135 (1%)
Frame = +1
Query: 172 IVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGF 351
I + ++ +Q+IR +R + + + K ++ +A+K+ + A E L +
Sbjct: 25 IANIRGIPTRDLQRIRKEVRNLANMRVSKKRLIIRALKETGYEDLANE-LEKEKEVTALL 83
Query: 352 VFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIP--AHNTGLGPEKTSFFQALSIPTK 525
+ T ++ + +E+KV P + G IAP +VIP N +GP +T +AL + TK
Sbjct: 84 LSTNENIFKIAKIFMEHKVNVPIKAGEIAPKDIVIPKGITNIPVGPIQTE-LRALGVKTK 142
Query: 526 ISKGTIEIINDVHIL 570
++ G IEI+ D ++
Sbjct: 143 VTSGKIEIVEDAVVV 157
>UniRef50_Q8PY51 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Archaea|Rep: Acidic ribosomal protein P0 homolog -
Methanosarcina mazei (Methanosarcina frisia)
Length = 347
Score = 51.6 bits (118), Expect = 1e-05
Identities = 32/147 (21%), Positives = 67/147 (45%), Gaps = 1/147 (0%)
Frame = +1
Query: 112 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDH 291
WK + I +L+ + +V + + + ++Q+IR L+ +++ + +NT+ +A+
Sbjct: 14 WKKDEIENIKELIQSHKVFGMVRIEGILATKIQKIRRDLKDVAVLKVSRNTLTERALNQL 73
Query: 292 LETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 471
E+ P + + L + +FT + L + K +P + GAIAP +++ T
Sbjct: 74 GESIPEMTRYLDN---QTALIFTNESPFKLYKLLEQTKTPSPIKAGAIAPEDIIVQKGPT 130
Query: 472 GLGPEK-TSFFQALSIPTKISKGTIEI 549
P Q+ IP I G + +
Sbjct: 131 SFPPGPILGELQSAGIPASIDAGKVAV 157
>UniRef50_A4S8Z4 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 255
Score = 50.4 bits (115), Expect = 3e-05
Identities = 43/166 (25%), Positives = 79/166 (47%), Gaps = 8/166 (4%)
Frame = +1
Query: 76 TQSKMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMG 255
TQ+K ++D+ WKS ++ L E ++ +N+ + +++R + + +G
Sbjct: 13 TQTK--KKDRE-WKSTLIERVRDALSERSSVYVFKYENMRNGTFKEMRAATEATTTFFVG 69
Query: 256 KNTMMRKAI-KD-HLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPG 429
N ++R A+ +D E + L +KG+ G +FT DV V+ AR G
Sbjct: 70 SNKVLRVALGRDAESEASEGAATLGARVKGDCGVMFTNLSREDVESVFERFAVKDYARTG 129
Query: 430 AIAPLSVVI---PAHN-TGLGPEKT--SFFQALSIPTKISKGTIEI 549
A+A +V + P H +G E T + +PTK+++G IE+
Sbjct: 130 ALARETVTVEAGPVHGPSGALMEHTLEPTLRKNGMPTKLNRGVIEL 175
>UniRef50_A0B921 Cluster: Ribosomal protein L10; n=1; Methanosaeta
thermophila PT|Rep: Ribosomal protein L10 - Methanosaeta
thermophila (strain DSM 6194 / PT)
(Methanothrixthermophila (strain DSM 6194 / PT))
Length = 321
Score = 50.4 bits (115), Expect = 3e-05
Identities = 35/154 (22%), Positives = 72/154 (46%), Gaps = 1/154 (0%)
Frame = +1
Query: 112 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDH 291
WK ++++ + + G + + + Q++R LR S V + N + R+AI
Sbjct: 14 WKLREVDELVERIRSSRVVGVAGIRELPADEFQRLRGLLRPISEVRVVNNNIARRAI--- 70
Query: 292 LETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 471
L+++ ++ L+ +I+ +F+ + ++ L K P + GA+AP+ +V+ + T
Sbjct: 71 LKSDESIRPLVDYIEDQTALIFSDANPFALKKMLDAEKRPMPIKAGAVAPVDIVVESGET 130
Query: 472 GLGP-EKTSFFQALSIPTKISKGTIEIINDVHIL 570
P Q+ IP I G + +IN +L
Sbjct: 131 SFSPGPMVGKLQSAGIPAAIKGGKV-VINQRVVL 163
>UniRef50_UPI0000ECA2B0 Cluster: mRNA turnover protein 4 homolog.;
n=3; Gallus gallus|Rep: mRNA turnover protein 4 homolog.
- Gallus gallus
Length = 249
Score = 50.0 bits (114), Expect = 4e-05
Identities = 36/154 (23%), Positives = 69/154 (44%), Gaps = 3/154 (1%)
Frame = +1
Query: 115 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI--KD 288
K ++ + +D Y FI N+ + +++ +R + + HS + GKN +M A+ +
Sbjct: 30 KQALIAELRRCVDTYKHIFIFSVANMRNNKLKDVRNAWK-HSRIFFGKNKVMMVALGREP 88
Query: 289 HLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHN 468
E L ++ H++G VG +FT +V + K AR G A +V +
Sbjct: 89 SSEYRENLHQVSKHLRGEVGLLFTNRTKEEVDEWFSSFKEVDFARAGNKATYTVSLDTGP 148
Query: 469 TGLGPEKTS-FFQALSIPTKISKGTIEIINDVHI 567
P + L +PT + KG + +++D +
Sbjct: 149 LEQFPHSMEPQLRQLGLPTALKKGVVTLLSDYEV 182
>UniRef50_Q19302 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 220
Score = 50.0 bits (114), Expect = 4e-05
Identities = 42/165 (25%), Positives = 72/165 (43%), Gaps = 3/165 (1%)
Frame = +1
Query: 82 SKMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKN 261
+K+ ++ K T K+N ++ +D+Y FI N+ S + IR + +S GKN
Sbjct: 13 TKVKKKTKDT-KNNLVNEVRASVDQYKNLFIFTIANMRSTRFIAIRQKYKENSRFFFGKN 71
Query: 262 TMMRKAIKDHLETNPA--LEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAI 435
++ A+ A L K +KG G +FT +V + E + AR G +
Sbjct: 72 NVISIALGKQKSDEYANQLHKASAILKGQCGLMFTNMSKKEVEAEFSEASEEDYARVGDV 131
Query: 436 APLSVVIP-AHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHI 567
A +VV+P + + L +PTK+ KG I + +
Sbjct: 132 ATETVVLPEGPISQFAFSMEPQLRKLGLPTKLDKGVITLYQQFEV 176
>UniRef50_Q9USZ6 Cluster: mRNA turnover protein 4 homolog; n=1;
Schizosaccharomyces pombe|Rep: mRNA turnover protein 4
homolog - Schizosaccharomyces pombe (Fission yeast)
Length = 241
Score = 49.2 bits (112), Expect = 7e-05
Identities = 44/129 (34%), Positives = 63/129 (48%), Gaps = 3/129 (2%)
Frame = +1
Query: 85 KMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNT 264
K G E KA F + Q LD + +I N+ + +++IR +G S + MGK
Sbjct: 17 KKGHEGKAA----LFSGVQQSLDSFDYMWIFDVTNMRNTYLKRIRDDWKG-SRIFMGKTK 71
Query: 265 MMRKAIKDHLETNPA--LEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAP-ARPGAI 435
+M KA+ E A + KL + G VG +FT +V E+ VQ AR GA+
Sbjct: 72 VMAKALGHTPEEEHAENVSKLTKLLHGAVGLLFTNSKPDEVIG-YFESFVQNDFARAGAV 130
Query: 436 APLSVVIPA 462
AP + VIPA
Sbjct: 131 APFTHVIPA 139
>UniRef50_O28781 Cluster: Acidic ribosomal protein P0 homolog; n=1;
Archaeoglobus fulgidus|Rep: Acidic ribosomal protein P0
homolog - Archaeoglobus fulgidus
Length = 339
Score = 48.8 bits (111), Expect = 9e-05
Identities = 35/140 (25%), Positives = 68/140 (48%), Gaps = 1/140 (0%)
Frame = +1
Query: 133 KIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPAL 312
+I +++ P IV NV + QMQ+IR RG + + + KNT++ +A+ D L +
Sbjct: 18 EIKRMISSKPVVAIVSFRNVPAGQMQKIRREFRGKAEIKVVKNTLLERAL-DALGGD--Y 74
Query: 313 EKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP-EK 489
KL ++ + + + + + + KV +P +P ++P+ VV+ T + P
Sbjct: 75 LKLKDYLGDQIAIITADENPFRLFRMIEDTKVPSPLKPNQVSPVDVVVNEGPTPIPPGPL 134
Query: 490 TSFFQALSIPTKISKGTIEI 549
+ Q +P I KG + +
Sbjct: 135 MAELQMAGLPVAIEKGKVVV 154
>UniRef50_A7PSP2 Cluster: Chromosome chr6 scaffold_28, whole genome
shotgun sequence; n=3; Vitis vinifera|Rep: Chromosome
chr6 scaffold_28, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 105
Score = 44.8 bits (101), Expect = 0.001
Identities = 28/69 (40%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = -2
Query: 500 KKEVFSGPR--PVL*AGMTTDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVKTKPTFPLM* 327
++ +F R PVL G T A P RAGA TL+ + S TS +SP VK PT P
Sbjct: 6 RESLFKSTRLSPVLPGGAMTSIWATNPVRAGAPTLYLATSSSTSFKSPFVKIGPTLPTRR 65
Query: 326 GSSFSRAGF 300
G+ + GF
Sbjct: 66 GTRLRKTGF 74
>UniRef50_Q4PHU5 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 315
Score = 40.3 bits (90), Expect = 0.031
Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 4/126 (3%)
Frame = +1
Query: 94 REDKATW--KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 267
R DK T K+N K+ EYP +I+G ++ + ++++R +G S + GK +
Sbjct: 14 RTDKKTKEDKANLIDKVRDAAQEYPYVWILGHHSMRNNYLKEVRDLWKG-SKIFFGKLKV 72
Query: 268 MRKAI--KDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAP 441
+ A+ + E + + + G+VG +FT +V D + + AR G+ A
Sbjct: 73 LALALGMTEEEEVRTGISGISQRLSGDVGLLFTESPPAEVIDWFKDYQRVDFARGGSKAT 132
Query: 442 LSVVIP 459
++ +P
Sbjct: 133 ETIELP 138
>UniRef50_A3ZT33 Cluster: Protein disulfide-isomerase-like protein;
n=1; Blastopirellula marina DSM 3645|Rep: Protein
disulfide-isomerase-like protein - Blastopirellula
marina DSM 3645
Length = 717
Score = 33.9 bits (74), Expect = 2.7
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -3
Query: 520 WGWKEPGRKKSSQDQGQCYERE*RQTMEQW-LQDEPGLGLCSPT 392
W W+ P ++Q Q +ER + +E W Q +P LG SP+
Sbjct: 422 WSWRLPDSASAAQKQALTHERRRQALLESWTAQPQPSLGGKSPS 465
>UniRef50_Q756T1 Cluster: AER172Cp; n=1; Eremothecium gossypii|Rep:
AER172Cp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 1268
Score = 33.9 bits (74), Expect = 2.7
Identities = 17/78 (21%), Positives = 36/78 (46%)
Frame = -1
Query: 561 DIIDNFNSTL*NLSGDGKSLEERSLLRTKASVMSGNDDRQWSNGSRTSRGLDFVLQQFIT 382
DI++NFN N D ++L +R L ++ + R++S+ + G+D +++
Sbjct: 268 DIVENFNKIYHNFENDKETLLKRLKLEENDKLLEYDKKRKYSDKANEEAGIDSIIEDSEP 327
Query: 381 HINKISTGEDKANISLDV 328
+ K ++L V
Sbjct: 328 DVKKSRNSISSLPVNLGV 345
>UniRef50_Q58J68 Cluster: Mitochondrial SBP40; n=1; Solanum
tuberosum|Rep: Mitochondrial SBP40 - Solanum tuberosum
(Potato)
Length = 387
Score = 33.1 bits (72), Expect = 4.7
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = +1
Query: 142 QLLDEYPKCFIVGADNVGSQQMQQIRISLRGH--SIVLMGKNTMMRKAIKDH 291
+ +DEY CF + A+NV Q + +SL+G+ S+ GKN ++ + H
Sbjct: 166 EFMDEYQSCFHIVAENVNFVQGLKRNVSLKGNVKSVYPKGKNFVLDENDNQH 217
>UniRef50_Q3SDA4 Cluster: Mini antigen; n=1; Paramecium
tetraurelia|Rep: Mini antigen - Paramecium tetraurelia
Length = 1456
Score = 33.1 bits (72), Expect = 4.7
Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Frame = +2
Query: 23 EVCAYXVLSLNFSEVPTSLNPRW---VGRTRLPGSPITSLKSSNCWTNTQNVS*WVRTM* 193
E C Y SLN T + RW GS +TS S+NC+TNT + W +
Sbjct: 658 EQCKYYYQSLNSF---TPIGCRWNITTSTCEQVGSTLTSYNSANCYTNTAKTARWSQASN 714
Query: 194 ARNRC 208
+ C
Sbjct: 715 QKGVC 719
>UniRef50_Q4TAP6 Cluster: Chromosome undetermined SCAF7271, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF7271,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 145
Score = 32.7 bits (71), Expect = 6.2
Identities = 15/28 (53%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Frame = +2
Query: 338 EMLALS-SPVEILLMCVINCWRTKSKPR 418
+ LAL+ +PV++LL CV+ CW T S+PR
Sbjct: 74 QALALALAPVQLLLACVLTCW-TGSRPR 100
>UniRef50_UPI000150A24A Cluster: hypothetical protein
TTHERM_00500880; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00500880 - Tetrahymena
thermophila SB210
Length = 415
Score = 32.3 bits (70), Expect = 8.2
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Frame = -1
Query: 222 NTDLLHLLRAYIVRTHYETFWVFVQQ---LDDFNEVIGLPGSLVLPTHLGLSEVGTSEKF 52
N DLL LL AY + H+E ++ + Q LDD N+V L T L ++EV S+ F
Sbjct: 327 NLDLLILLFAYPTKEHFERKFISLSQKNRLDDLNQV-----KQHLCTSLKVTEVDYSKNF 381
Query: 51 KDKTKY 34
+ Y
Sbjct: 382 NNYKNY 387
>UniRef50_UPI00005874CE Cluster: PREDICTED: similar to
OTTHUMP00000029908; n=2; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to OTTHUMP00000029908
- Strongylocentrotus purpuratus
Length = 379
Score = 32.3 bits (70), Expect = 8.2
Identities = 19/70 (27%), Positives = 36/70 (51%)
Frame = +1
Query: 259 NTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIA 438
N M+K I+ H+E N ALE ++ +K +V + T + DVR ++ + + +
Sbjct: 307 NITMKKEIEGHIEENEALETIIQQLKEDVKSMST-DPISDVRKQMFPHLYKEVQKCTPDM 365
Query: 439 PLSVVIPAHN 468
+ + IP H+
Sbjct: 366 DVELDIPRHD 375
>UniRef50_A5BI07 Cluster: Putative uncharacterized protein; n=6;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 1803
Score = 32.3 bits (70), Expect = 8.2
Identities = 21/75 (28%), Positives = 35/75 (46%)
Frame = -1
Query: 486 LRTKASVMSGNDDRQWSNGSRTSRGLDFVLQQFITHINKISTGEDKANISLDVRKQFFES 307
L+ KA + N R S + T+ +F+ + F TH +N S ++F+E
Sbjct: 100 LKDKAKIWL-NSLRPRSIRTWTNLQAEFLKKFFPTHRTN-GLKRQISNFSAKENEKFYEC 157
Query: 306 WICFKMVLDGFPHHG 262
W + ++ FPHHG
Sbjct: 158 WERYMEAINAFPHHG 172
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 623,396,040
Number of Sequences: 1657284
Number of extensions: 13300455
Number of successful extensions: 39895
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 38469
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39855
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 38738010471
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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