BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= S06A01NCLL0001_A14 (570 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic ri... 269 4e-72 BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, larg... 269 4e-72 BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, larg... 269 4e-72 BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, larg... 269 4e-72 BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, larg... 269 4e-72 BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, larg... 269 4e-72 BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, larg... 269 4e-72 BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, larg... 269 4e-72 BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, larg... 269 4e-72 BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, larg... 269 4e-72 BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, larg... 269 4e-72 BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, larg... 269 4e-72 BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, larg... 269 4e-72 AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein. 269 4e-72 AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0 va... 268 9e-72 AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein. 266 4e-71 AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0 va... 266 4e-71 BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein. 263 3e-70 BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein. 255 9e-68 U75697-1|AAB88241.1| 428|Homo sapiens RPD3-2B protein. 30 5.0 U75696-1|AAB88240.1| 429|Homo sapiens RPD3-2A protein. 30 5.0 U66914-1|AAC52038.1| 428|Homo sapiens histone deacetylase 3 pro... 30 5.0 BC000614-1|AAH00614.1| 428|Homo sapiens histone deacetylase 3 p... 30 5.0 AF059650-1|AAC26509.1| 428|Homo sapiens histone deacetylase 3 p... 30 5.0 AF053138-1|AAC08351.1| 259|Homo sapiens histone deacetylase 3 p... 30 5.0 AF039703-1|AAC98927.1| 428|Homo sapiens histone deacetylase 3 p... 30 5.0 AF005482-1|AAB87752.1| 371|Homo sapiens histone deacetylase-3C ... 30 5.0 EF567077-1|ABQ63084.1| 1328|Homo sapiens Fanconi anemia compleme... 29 8.7 EF469766-1|ABP88002.1| 1328|Homo sapiens Fanconi anemia compleme... 29 8.7 AK027564-1|BAB55200.1| 906|Homo sapiens protein ( Homo sapiens ... 29 8.7 AK001581-1|BAA91770.1| 1084|Homo sapiens protein ( Homo sapiens ... 29 8.7 AB058697-1|BAB47423.1| 802|Homo sapiens KIAA1794 protein protein. 29 8.7 >M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic ribosomal phosphoprotein P0 mRNA, complete cds. ). Length = 317 Score = 269 bits (660), Expect = 4e-72 Identities = 125/161 (77%), Positives = 143/161 (88%) Frame = +1 Query: 88 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 267 M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60 Query: 268 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 447 MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120 Query: 448 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHIL 570 V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++ Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLI 161 >BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, large, P0 protein. Length = 317 Score = 269 bits (660), Expect = 4e-72 Identities = 125/161 (77%), Positives = 143/161 (88%) Frame = +1 Query: 88 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 267 M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60 Query: 268 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 447 MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120 Query: 448 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHIL 570 V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++ Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLI 161 >BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, large, P0 protein. Length = 317 Score = 269 bits (660), Expect = 4e-72 Identities = 125/161 (77%), Positives = 143/161 (88%) Frame = +1 Query: 88 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 267 M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60 Query: 268 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 447 MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120 Query: 448 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHIL 570 V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++ Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLI 161 >BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, large, P0 protein. Length = 317 Score = 269 bits (660), Expect = 4e-72 Identities = 125/161 (77%), Positives = 143/161 (88%) Frame = +1 Query: 88 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 267 M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60 Query: 268 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 447 MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120 Query: 448 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHIL 570 V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++ Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLI 161 >BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, large, P0 protein. Length = 317 Score = 269 bits (660), Expect = 4e-72 Identities = 125/161 (77%), Positives = 143/161 (88%) Frame = +1 Query: 88 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 267 M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60 Query: 268 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 447 MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120 Query: 448 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHIL 570 V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++ Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLI 161 >BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, large, P0 protein. Length = 317 Score = 269 bits (660), Expect = 4e-72 Identities = 125/161 (77%), Positives = 143/161 (88%) Frame = +1 Query: 88 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 267 M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60 Query: 268 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 447 MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120 Query: 448 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHIL 570 V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++ Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLI 161 >BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, large, P0 protein. Length = 317 Score = 269 bits (660), Expect = 4e-72 Identities = 125/161 (77%), Positives = 143/161 (88%) Frame = +1 Query: 88 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 267 M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60 Query: 268 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 447 MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120 Query: 448 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHIL 570 V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++ Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLI 161 >BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, large, P0 protein. Length = 317 Score = 269 bits (660), Expect = 4e-72 Identities = 125/161 (77%), Positives = 143/161 (88%) Frame = +1 Query: 88 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 267 M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60 Query: 268 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 447 MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120 Query: 448 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHIL 570 V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++ Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLI 161 >BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, large, P0 protein. Length = 317 Score = 269 bits (660), Expect = 4e-72 Identities = 125/161 (77%), Positives = 143/161 (88%) Frame = +1 Query: 88 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 267 M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60 Query: 268 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 447 MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120 Query: 448 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHIL 570 V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++ Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLI 161 >BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, large, P0 protein. Length = 317 Score = 269 bits (660), Expect = 4e-72 Identities = 125/161 (77%), Positives = 143/161 (88%) Frame = +1 Query: 88 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 267 M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60 Query: 268 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 447 MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120 Query: 448 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHIL 570 V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++ Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLI 161 >BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, large, P0 protein. Length = 317 Score = 269 bits (660), Expect = 4e-72 Identities = 125/161 (77%), Positives = 143/161 (88%) Frame = +1 Query: 88 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 267 M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60 Query: 268 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 447 MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120 Query: 448 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHIL 570 V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++ Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLI 161 >BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, large, P0 protein. Length = 317 Score = 269 bits (660), Expect = 4e-72 Identities = 125/161 (77%), Positives = 143/161 (88%) Frame = +1 Query: 88 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 267 M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60 Query: 268 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 447 MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120 Query: 448 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHIL 570 V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++ Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLI 161 >BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, large, P0 protein. Length = 317 Score = 269 bits (660), Expect = 4e-72 Identities = 125/161 (77%), Positives = 143/161 (88%) Frame = +1 Query: 88 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 267 M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60 Query: 268 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 447 MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120 Query: 448 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHIL 570 V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++ Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLI 161 >AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein. Length = 317 Score = 269 bits (660), Expect = 4e-72 Identities = 125/161 (77%), Positives = 143/161 (88%) Frame = +1 Query: 88 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 267 M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60 Query: 268 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 447 MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120 Query: 448 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHIL 570 V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++ Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLI 161 >AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0 variant protein. Length = 317 Score = 268 bits (657), Expect = 9e-72 Identities = 124/161 (77%), Positives = 143/161 (88%) Frame = +1 Query: 88 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 267 M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMG+NTM Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGRNTM 60 Query: 268 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 447 MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120 Query: 448 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHIL 570 V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++ Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLI 161 >AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein. Length = 317 Score = 266 bits (652), Expect = 4e-71 Identities = 125/161 (77%), Positives = 141/161 (87%) Frame = +1 Query: 88 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 267 M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG +VLMGKNTM Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKVVVLMGKNTM 60 Query: 268 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 447 MRKAI+ HLE NPALEKLLPHI GNVGFVFT+ DL ++RD LL NKV A AR GAIAP Sbjct: 61 MRKAIRGHLENNPALEKLLPHIWGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120 Query: 448 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHIL 570 V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++ Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLI 161 >AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0 variant protein. Length = 317 Score = 266 bits (652), Expect = 4e-71 Identities = 124/161 (77%), Positives = 142/161 (88%) Frame = +1 Query: 88 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 267 M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60 Query: 268 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 447 MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120 Query: 448 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHIL 570 V +PA NTGLGPEKTSF QAL I TKIS+GTIEI++DV ++ Sbjct: 121 VTVPAQNTGLGPEKTSFSQALGITTKISRGTIEILSDVQLI 161 >BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein. Length = 255 Score = 263 bits (645), Expect = 3e-70 Identities = 123/155 (79%), Positives = 138/155 (89%) Frame = +1 Query: 88 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 267 M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60 Query: 268 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 447 MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120 Query: 448 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEII 552 V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI+ Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEIL 155 >BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein. Length = 254 Score = 255 bits (624), Expect = 9e-68 Identities = 121/155 (78%), Positives = 137/155 (88%) Frame = +1 Query: 88 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 267 M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60 Query: 268 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 447 MRKAI+ HLE NPALEKLLP ++GNVGFVFT+ DL ++RD LL NKV A AR GAIAP Sbjct: 61 MRKAIRGHLENNPALEKLLP-LRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 119 Query: 448 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEII 552 V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI+ Sbjct: 120 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEIL 154 >U75697-1|AAB88241.1| 428|Homo sapiens RPD3-2B protein. Length = 428 Score = 30.3 bits (65), Expect = 5.0 Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 3/49 (6%) Frame = +1 Query: 100 DKATWKSNYFVKIIQLLDEY-PKCFIV--GADNVGSQQMQQIRISLRGH 237 D ++K + I Q++D Y P C ++ GAD++G ++ +S+RGH Sbjct: 228 DDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGH 276 >U75696-1|AAB88240.1| 429|Homo sapiens RPD3-2A protein. Length = 429 Score = 30.3 bits (65), Expect = 5.0 Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 3/49 (6%) Frame = +1 Query: 100 DKATWKSNYFVKIIQLLDEY-PKCFIV--GADNVGSQQMQQIRISLRGH 237 D ++K + I Q++D Y P C ++ GAD++G ++ +S+RGH Sbjct: 229 DDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGH 277 >U66914-1|AAC52038.1| 428|Homo sapiens histone deacetylase 3 protein. Length = 428 Score = 30.3 bits (65), Expect = 5.0 Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 3/49 (6%) Frame = +1 Query: 100 DKATWKSNYFVKIIQLLDEY-PKCFIV--GADNVGSQQMQQIRISLRGH 237 D ++K + I Q++D Y P C ++ GAD++G ++ +S+RGH Sbjct: 228 DDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGH 276 >BC000614-1|AAH00614.1| 428|Homo sapiens histone deacetylase 3 protein. Length = 428 Score = 30.3 bits (65), Expect = 5.0 Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 3/49 (6%) Frame = +1 Query: 100 DKATWKSNYFVKIIQLLDEY-PKCFIV--GADNVGSQQMQQIRISLRGH 237 D ++K + I Q++D Y P C ++ GAD++G ++ +S+RGH Sbjct: 228 DDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGH 276 >AF059650-1|AAC26509.1| 428|Homo sapiens histone deacetylase 3 protein. Length = 428 Score = 30.3 bits (65), Expect = 5.0 Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 3/49 (6%) Frame = +1 Query: 100 DKATWKSNYFVKIIQLLDEY-PKCFIV--GADNVGSQQMQQIRISLRGH 237 D ++K + I Q++D Y P C ++ GAD++G ++ +S+RGH Sbjct: 228 DDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGH 276 >AF053138-1|AAC08351.1| 259|Homo sapiens histone deacetylase 3 protein. Length = 259 Score = 30.3 bits (65), Expect = 5.0 Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 3/49 (6%) Frame = +1 Query: 100 DKATWKSNYFVKIIQLLDEY-PKCFIV--GADNVGSQQMQQIRISLRGH 237 D ++K + I Q++D Y P C ++ GAD++G ++ +S+RGH Sbjct: 134 DDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGH 182 >AF039703-1|AAC98927.1| 428|Homo sapiens histone deacetylase 3 protein. Length = 428 Score = 30.3 bits (65), Expect = 5.0 Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 3/49 (6%) Frame = +1 Query: 100 DKATWKSNYFVKIIQLLDEY-PKCFIV--GADNVGSQQMQQIRISLRGH 237 D ++K + I Q++D Y P C ++ GAD++G ++ +S+RGH Sbjct: 228 DDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGH 276 >AF005482-1|AAB87752.1| 371|Homo sapiens histone deacetylase-3C protein. Length = 371 Score = 30.3 bits (65), Expect = 5.0 Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 3/49 (6%) Frame = +1 Query: 100 DKATWKSNYFVKIIQLLDEY-PKCFIV--GADNVGSQQMQQIRISLRGH 237 D ++K + I Q++D Y P C ++ GAD++G ++ +S+RGH Sbjct: 171 DDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGH 219 >EF567077-1|ABQ63084.1| 1328|Homo sapiens Fanconi anemia complementation group I protein. Length = 1328 Score = 29.5 bits (63), Expect = 8.7 Identities = 12/40 (30%), Positives = 23/40 (57%) Frame = +2 Query: 275 KPSRTILKQIQLSKNCFLTSREMLALSSPVEILLMCVINC 394 +P +L ++L C LT + ++L P++ LL C+ +C Sbjct: 636 EPKPDLLPPLKLEA-CILTQGDKISLQEPLDYLLCCIQHC 674 >EF469766-1|ABP88002.1| 1328|Homo sapiens Fanconi anemia complementation group I isoform 3 protein. Length = 1328 Score = 29.5 bits (63), Expect = 8.7 Identities = 12/40 (30%), Positives = 23/40 (57%) Frame = +2 Query: 275 KPSRTILKQIQLSKNCFLTSREMLALSSPVEILLMCVINC 394 +P +L ++L C LT + ++L P++ LL C+ +C Sbjct: 636 EPKPDLLPPLKLEA-CILTQGDKISLQEPLDYLLCCIQHC 674 >AK027564-1|BAB55200.1| 906|Homo sapiens protein ( Homo sapiens cDNA FLJ14658 fis, clone NT2RP2002549. ). Length = 906 Score = 29.5 bits (63), Expect = 8.7 Identities = 12/40 (30%), Positives = 23/40 (57%) Frame = +2 Query: 275 KPSRTILKQIQLSKNCFLTSREMLALSSPVEILLMCVINC 394 +P +L ++L C LT + ++L P++ LL C+ +C Sbjct: 274 EPKPDLLPPLKLEA-CILTQGDKISLQEPLDYLLCCIQHC 312 >AK001581-1|BAA91770.1| 1084|Homo sapiens protein ( Homo sapiens cDNA FLJ10719 fis, clone NT2RP3001109. ). Length = 1084 Score = 29.5 bits (63), Expect = 8.7 Identities = 12/40 (30%), Positives = 23/40 (57%) Frame = +2 Query: 275 KPSRTILKQIQLSKNCFLTSREMLALSSPVEILLMCVINC 394 +P +L ++L C LT + ++L P++ LL C+ +C Sbjct: 457 EPKPDLLPPLKLEA-CILTQGDKISLQEPLDYLLCCIQHC 495 >AB058697-1|BAB47423.1| 802|Homo sapiens KIAA1794 protein protein. Length = 802 Score = 29.5 bits (63), Expect = 8.7 Identities = 12/40 (30%), Positives = 23/40 (57%) Frame = +2 Query: 275 KPSRTILKQIQLSKNCFLTSREMLALSSPVEILLMCVINC 394 +P +L ++L C LT + ++L P++ LL C+ +C Sbjct: 110 EPKPDLLPPLKLEA-CILTQGDKISLQEPLDYLLCCIQHC 148 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 92,866,718 Number of Sequences: 237096 Number of extensions: 2160668 Number of successful extensions: 4588 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 4372 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4587 length of database: 76,859,062 effective HSP length: 86 effective length of database: 56,468,806 effective search space used: 5816287018 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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