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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_A14
         (570 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M17885-1|AAA36470.1|  317|Homo sapiens protein ( Human acidic ri...   269   4e-72
BC015690-1|AAH15690.1|  317|Homo sapiens ribosomal protein, larg...   269   4e-72
BC015173-1|AAH15173.1|  317|Homo sapiens ribosomal protein, larg...   269   4e-72
BC009867-1|AAH09867.1|  317|Homo sapiens ribosomal protein, larg...   269   4e-72
BC008594-1|AAH08594.1|  317|Homo sapiens ribosomal protein, larg...   269   4e-72
BC008092-1|AAH08092.1|  317|Homo sapiens ribosomal protein, larg...   269   4e-72
BC005863-1|AAH05863.1|  317|Homo sapiens ribosomal protein, larg...   269   4e-72
BC003655-1|AAH03655.1|  317|Homo sapiens ribosomal protein, larg...   269   4e-72
BC001834-1|AAH01834.1|  317|Homo sapiens ribosomal protein, larg...   269   4e-72
BC001127-1|AAH01127.1|  317|Homo sapiens ribosomal protein, larg...   269   4e-72
BC000752-1|AAH00752.1|  317|Homo sapiens ribosomal protein, larg...   269   4e-72
BC000345-1|AAH00345.1|  317|Homo sapiens ribosomal protein, larg...   269   4e-72
BC000087-1|AAH00087.1|  317|Homo sapiens ribosomal protein, larg...   269   4e-72
AC004263-1|AAC05176.1|  317|Homo sapiens WUGSC:H_278C19.2 protein.    269   4e-72
AK222468-1|BAD96188.1|  317|Homo sapiens ribosomal protein P0 va...   268   9e-72
AY064377-1|AAL62450.1|  317|Homo sapiens BLOCK 23 protein.            266   4e-71
AK222571-1|BAD96291.1|  317|Homo sapiens ribosomal protein P0 va...   266   4e-71
BC107717-1|AAI07718.1|  255|Homo sapiens RPLP0 protein protein.       263   3e-70
BC070194-1|AAH70194.1|  254|Homo sapiens RPLP0 protein protein.       255   9e-68
U75697-1|AAB88241.1|  428|Homo sapiens RPD3-2B protein.                30   5.0  
U75696-1|AAB88240.1|  429|Homo sapiens RPD3-2A protein.                30   5.0  
U66914-1|AAC52038.1|  428|Homo sapiens histone deacetylase 3 pro...    30   5.0  
BC000614-1|AAH00614.1|  428|Homo sapiens histone deacetylase 3 p...    30   5.0  
AF059650-1|AAC26509.1|  428|Homo sapiens histone deacetylase 3 p...    30   5.0  
AF053138-1|AAC08351.1|  259|Homo sapiens histone deacetylase 3 p...    30   5.0  
AF039703-1|AAC98927.1|  428|Homo sapiens histone deacetylase 3 p...    30   5.0  
AF005482-1|AAB87752.1|  371|Homo sapiens histone deacetylase-3C ...    30   5.0  
EF567077-1|ABQ63084.1| 1328|Homo sapiens Fanconi anemia compleme...    29   8.7  
EF469766-1|ABP88002.1| 1328|Homo sapiens Fanconi anemia compleme...    29   8.7  
AK027564-1|BAB55200.1|  906|Homo sapiens protein ( Homo sapiens ...    29   8.7  
AK001581-1|BAA91770.1| 1084|Homo sapiens protein ( Homo sapiens ...    29   8.7  
AB058697-1|BAB47423.1|  802|Homo sapiens KIAA1794 protein protein.     29   8.7  

>M17885-1|AAA36470.1|  317|Homo sapiens protein ( Human acidic
           ribosomal phosphoprotein P0 mRNA, complete cds. ).
          Length = 317

 Score =  269 bits (660), Expect = 4e-72
 Identities = 125/161 (77%), Positives = 143/161 (88%)
 Frame = +1

Query: 88  MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 267
           M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1   MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60

Query: 268 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 447
           MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP  
Sbjct: 61  MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120

Query: 448 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHIL 570
           V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLI 161


>BC015690-1|AAH15690.1|  317|Homo sapiens ribosomal protein, large,
           P0 protein.
          Length = 317

 Score =  269 bits (660), Expect = 4e-72
 Identities = 125/161 (77%), Positives = 143/161 (88%)
 Frame = +1

Query: 88  MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 267
           M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1   MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60

Query: 268 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 447
           MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP  
Sbjct: 61  MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120

Query: 448 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHIL 570
           V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLI 161


>BC015173-1|AAH15173.1|  317|Homo sapiens ribosomal protein, large,
           P0 protein.
          Length = 317

 Score =  269 bits (660), Expect = 4e-72
 Identities = 125/161 (77%), Positives = 143/161 (88%)
 Frame = +1

Query: 88  MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 267
           M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1   MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60

Query: 268 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 447
           MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP  
Sbjct: 61  MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120

Query: 448 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHIL 570
           V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLI 161


>BC009867-1|AAH09867.1|  317|Homo sapiens ribosomal protein, large,
           P0 protein.
          Length = 317

 Score =  269 bits (660), Expect = 4e-72
 Identities = 125/161 (77%), Positives = 143/161 (88%)
 Frame = +1

Query: 88  MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 267
           M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1   MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60

Query: 268 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 447
           MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP  
Sbjct: 61  MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120

Query: 448 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHIL 570
           V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLI 161


>BC008594-1|AAH08594.1|  317|Homo sapiens ribosomal protein, large,
           P0 protein.
          Length = 317

 Score =  269 bits (660), Expect = 4e-72
 Identities = 125/161 (77%), Positives = 143/161 (88%)
 Frame = +1

Query: 88  MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 267
           M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1   MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60

Query: 268 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 447
           MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP  
Sbjct: 61  MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120

Query: 448 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHIL 570
           V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLI 161


>BC008092-1|AAH08092.1|  317|Homo sapiens ribosomal protein, large,
           P0 protein.
          Length = 317

 Score =  269 bits (660), Expect = 4e-72
 Identities = 125/161 (77%), Positives = 143/161 (88%)
 Frame = +1

Query: 88  MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 267
           M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1   MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60

Query: 268 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 447
           MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP  
Sbjct: 61  MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120

Query: 448 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHIL 570
           V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLI 161


>BC005863-1|AAH05863.1|  317|Homo sapiens ribosomal protein, large,
           P0 protein.
          Length = 317

 Score =  269 bits (660), Expect = 4e-72
 Identities = 125/161 (77%), Positives = 143/161 (88%)
 Frame = +1

Query: 88  MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 267
           M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1   MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60

Query: 268 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 447
           MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP  
Sbjct: 61  MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120

Query: 448 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHIL 570
           V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLI 161


>BC003655-1|AAH03655.1|  317|Homo sapiens ribosomal protein, large,
           P0 protein.
          Length = 317

 Score =  269 bits (660), Expect = 4e-72
 Identities = 125/161 (77%), Positives = 143/161 (88%)
 Frame = +1

Query: 88  MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 267
           M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1   MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60

Query: 268 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 447
           MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP  
Sbjct: 61  MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120

Query: 448 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHIL 570
           V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLI 161


>BC001834-1|AAH01834.1|  317|Homo sapiens ribosomal protein, large,
           P0 protein.
          Length = 317

 Score =  269 bits (660), Expect = 4e-72
 Identities = 125/161 (77%), Positives = 143/161 (88%)
 Frame = +1

Query: 88  MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 267
           M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1   MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60

Query: 268 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 447
           MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP  
Sbjct: 61  MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120

Query: 448 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHIL 570
           V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLI 161


>BC001127-1|AAH01127.1|  317|Homo sapiens ribosomal protein, large,
           P0 protein.
          Length = 317

 Score =  269 bits (660), Expect = 4e-72
 Identities = 125/161 (77%), Positives = 143/161 (88%)
 Frame = +1

Query: 88  MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 267
           M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1   MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60

Query: 268 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 447
           MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP  
Sbjct: 61  MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120

Query: 448 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHIL 570
           V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLI 161


>BC000752-1|AAH00752.1|  317|Homo sapiens ribosomal protein, large,
           P0 protein.
          Length = 317

 Score =  269 bits (660), Expect = 4e-72
 Identities = 125/161 (77%), Positives = 143/161 (88%)
 Frame = +1

Query: 88  MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 267
           M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1   MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60

Query: 268 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 447
           MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP  
Sbjct: 61  MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120

Query: 448 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHIL 570
           V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLI 161


>BC000345-1|AAH00345.1|  317|Homo sapiens ribosomal protein, large,
           P0 protein.
          Length = 317

 Score =  269 bits (660), Expect = 4e-72
 Identities = 125/161 (77%), Positives = 143/161 (88%)
 Frame = +1

Query: 88  MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 267
           M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1   MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60

Query: 268 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 447
           MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP  
Sbjct: 61  MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120

Query: 448 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHIL 570
           V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLI 161


>BC000087-1|AAH00087.1|  317|Homo sapiens ribosomal protein, large,
           P0 protein.
          Length = 317

 Score =  269 bits (660), Expect = 4e-72
 Identities = 125/161 (77%), Positives = 143/161 (88%)
 Frame = +1

Query: 88  MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 267
           M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1   MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60

Query: 268 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 447
           MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP  
Sbjct: 61  MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120

Query: 448 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHIL 570
           V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLI 161


>AC004263-1|AAC05176.1|  317|Homo sapiens WUGSC:H_278C19.2 protein.
          Length = 317

 Score =  269 bits (660), Expect = 4e-72
 Identities = 125/161 (77%), Positives = 143/161 (88%)
 Frame = +1

Query: 88  MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 267
           M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1   MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60

Query: 268 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 447
           MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP  
Sbjct: 61  MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120

Query: 448 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHIL 570
           V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLI 161


>AK222468-1|BAD96188.1|  317|Homo sapiens ribosomal protein P0
           variant protein.
          Length = 317

 Score =  268 bits (657), Expect = 9e-72
 Identities = 124/161 (77%), Positives = 143/161 (88%)
 Frame = +1

Query: 88  MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 267
           M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMG+NTM
Sbjct: 1   MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGRNTM 60

Query: 268 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 447
           MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP  
Sbjct: 61  MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120

Query: 448 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHIL 570
           V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLI 161


>AY064377-1|AAL62450.1|  317|Homo sapiens BLOCK 23 protein.
          Length = 317

 Score =  266 bits (652), Expect = 4e-71
 Identities = 125/161 (77%), Positives = 141/161 (87%)
 Frame = +1

Query: 88  MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 267
           M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG  +VLMGKNTM
Sbjct: 1   MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKVVVLMGKNTM 60

Query: 268 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 447
           MRKAI+ HLE NPALEKLLPHI GNVGFVFT+ DL ++RD LL NKV A AR GAIAP  
Sbjct: 61  MRKAIRGHLENNPALEKLLPHIWGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120

Query: 448 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHIL 570
           V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLI 161


>AK222571-1|BAD96291.1|  317|Homo sapiens ribosomal protein P0
           variant protein.
          Length = 317

 Score =  266 bits (652), Expect = 4e-71
 Identities = 124/161 (77%), Positives = 142/161 (88%)
 Frame = +1

Query: 88  MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 267
           M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1   MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60

Query: 268 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 447
           MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP  
Sbjct: 61  MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120

Query: 448 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHIL 570
           V +PA NTGLGPEKTSF QAL I TKIS+GTIEI++DV ++
Sbjct: 121 VTVPAQNTGLGPEKTSFSQALGITTKISRGTIEILSDVQLI 161


>BC107717-1|AAI07718.1|  255|Homo sapiens RPLP0 protein protein.
          Length = 255

 Score =  263 bits (645), Expect = 3e-70
 Identities = 123/155 (79%), Positives = 138/155 (89%)
 Frame = +1

Query: 88  MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 267
           M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1   MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60

Query: 268 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 447
           MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP  
Sbjct: 61  MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120

Query: 448 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEII 552
           V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI+
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEIL 155


>BC070194-1|AAH70194.1|  254|Homo sapiens RPLP0 protein protein.
          Length = 254

 Score =  255 bits (624), Expect = 9e-68
 Identities = 121/155 (78%), Positives = 137/155 (88%)
 Frame = +1

Query: 88  MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 267
           M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1   MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60

Query: 268 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 447
           MRKAI+ HLE NPALEKLLP ++GNVGFVFT+ DL ++RD LL NKV A AR GAIAP  
Sbjct: 61  MRKAIRGHLENNPALEKLLP-LRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 119

Query: 448 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEII 552
           V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI+
Sbjct: 120 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEIL 154


>U75697-1|AAB88241.1|  428|Homo sapiens RPD3-2B protein.
          Length = 428

 Score = 30.3 bits (65), Expect = 5.0
 Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
 Frame = +1

Query: 100 DKATWKSNYFVKIIQLLDEY-PKCFIV--GADNVGSQQMQQIRISLRGH 237
           D  ++K  +   I Q++D Y P C ++  GAD++G  ++    +S+RGH
Sbjct: 228 DDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGH 276


>U75696-1|AAB88240.1|  429|Homo sapiens RPD3-2A protein.
          Length = 429

 Score = 30.3 bits (65), Expect = 5.0
 Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
 Frame = +1

Query: 100 DKATWKSNYFVKIIQLLDEY-PKCFIV--GADNVGSQQMQQIRISLRGH 237
           D  ++K  +   I Q++D Y P C ++  GAD++G  ++    +S+RGH
Sbjct: 229 DDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGH 277


>U66914-1|AAC52038.1|  428|Homo sapiens histone deacetylase 3
           protein.
          Length = 428

 Score = 30.3 bits (65), Expect = 5.0
 Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
 Frame = +1

Query: 100 DKATWKSNYFVKIIQLLDEY-PKCFIV--GADNVGSQQMQQIRISLRGH 237
           D  ++K  +   I Q++D Y P C ++  GAD++G  ++    +S+RGH
Sbjct: 228 DDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGH 276


>BC000614-1|AAH00614.1|  428|Homo sapiens histone deacetylase 3
           protein.
          Length = 428

 Score = 30.3 bits (65), Expect = 5.0
 Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
 Frame = +1

Query: 100 DKATWKSNYFVKIIQLLDEY-PKCFIV--GADNVGSQQMQQIRISLRGH 237
           D  ++K  +   I Q++D Y P C ++  GAD++G  ++    +S+RGH
Sbjct: 228 DDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGH 276


>AF059650-1|AAC26509.1|  428|Homo sapiens histone deacetylase 3
           protein.
          Length = 428

 Score = 30.3 bits (65), Expect = 5.0
 Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
 Frame = +1

Query: 100 DKATWKSNYFVKIIQLLDEY-PKCFIV--GADNVGSQQMQQIRISLRGH 237
           D  ++K  +   I Q++D Y P C ++  GAD++G  ++    +S+RGH
Sbjct: 228 DDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGH 276


>AF053138-1|AAC08351.1|  259|Homo sapiens histone deacetylase 3
           protein.
          Length = 259

 Score = 30.3 bits (65), Expect = 5.0
 Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
 Frame = +1

Query: 100 DKATWKSNYFVKIIQLLDEY-PKCFIV--GADNVGSQQMQQIRISLRGH 237
           D  ++K  +   I Q++D Y P C ++  GAD++G  ++    +S+RGH
Sbjct: 134 DDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGH 182


>AF039703-1|AAC98927.1|  428|Homo sapiens histone deacetylase 3
           protein.
          Length = 428

 Score = 30.3 bits (65), Expect = 5.0
 Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
 Frame = +1

Query: 100 DKATWKSNYFVKIIQLLDEY-PKCFIV--GADNVGSQQMQQIRISLRGH 237
           D  ++K  +   I Q++D Y P C ++  GAD++G  ++    +S+RGH
Sbjct: 228 DDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGH 276


>AF005482-1|AAB87752.1|  371|Homo sapiens histone deacetylase-3C
           protein.
          Length = 371

 Score = 30.3 bits (65), Expect = 5.0
 Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
 Frame = +1

Query: 100 DKATWKSNYFVKIIQLLDEY-PKCFIV--GADNVGSQQMQQIRISLRGH 237
           D  ++K  +   I Q++D Y P C ++  GAD++G  ++    +S+RGH
Sbjct: 171 DDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGH 219


>EF567077-1|ABQ63084.1| 1328|Homo sapiens Fanconi anemia
           complementation group I protein.
          Length = 1328

 Score = 29.5 bits (63), Expect = 8.7
 Identities = 12/40 (30%), Positives = 23/40 (57%)
 Frame = +2

Query: 275 KPSRTILKQIQLSKNCFLTSREMLALSSPVEILLMCVINC 394
           +P   +L  ++L   C LT  + ++L  P++ LL C+ +C
Sbjct: 636 EPKPDLLPPLKLEA-CILTQGDKISLQEPLDYLLCCIQHC 674


>EF469766-1|ABP88002.1| 1328|Homo sapiens Fanconi anemia
           complementation group I isoform 3 protein.
          Length = 1328

 Score = 29.5 bits (63), Expect = 8.7
 Identities = 12/40 (30%), Positives = 23/40 (57%)
 Frame = +2

Query: 275 KPSRTILKQIQLSKNCFLTSREMLALSSPVEILLMCVINC 394
           +P   +L  ++L   C LT  + ++L  P++ LL C+ +C
Sbjct: 636 EPKPDLLPPLKLEA-CILTQGDKISLQEPLDYLLCCIQHC 674


>AK027564-1|BAB55200.1|  906|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14658 fis, clone NT2RP2002549. ).
          Length = 906

 Score = 29.5 bits (63), Expect = 8.7
 Identities = 12/40 (30%), Positives = 23/40 (57%)
 Frame = +2

Query: 275 KPSRTILKQIQLSKNCFLTSREMLALSSPVEILLMCVINC 394
           +P   +L  ++L   C LT  + ++L  P++ LL C+ +C
Sbjct: 274 EPKPDLLPPLKLEA-CILTQGDKISLQEPLDYLLCCIQHC 312


>AK001581-1|BAA91770.1| 1084|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10719 fis, clone NT2RP3001109. ).
          Length = 1084

 Score = 29.5 bits (63), Expect = 8.7
 Identities = 12/40 (30%), Positives = 23/40 (57%)
 Frame = +2

Query: 275 KPSRTILKQIQLSKNCFLTSREMLALSSPVEILLMCVINC 394
           +P   +L  ++L   C LT  + ++L  P++ LL C+ +C
Sbjct: 457 EPKPDLLPPLKLEA-CILTQGDKISLQEPLDYLLCCIQHC 495


>AB058697-1|BAB47423.1|  802|Homo sapiens KIAA1794 protein protein.
          Length = 802

 Score = 29.5 bits (63), Expect = 8.7
 Identities = 12/40 (30%), Positives = 23/40 (57%)
 Frame = +2

Query: 275 KPSRTILKQIQLSKNCFLTSREMLALSSPVEILLMCVINC 394
           +P   +L  ++L   C LT  + ++L  P++ LL C+ +C
Sbjct: 110 EPKPDLLPPLKLEA-CILTQGDKISLQEPLDYLLCCIQHC 148


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,866,718
Number of Sequences: 237096
Number of extensions: 2160668
Number of successful extensions: 4588
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 4372
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4587
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5816287018
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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