Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_A12
(192 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 23 0.37
DQ855492-1|ABH88179.1| 251|Tribolium castaneum chemosensory pro... 20 2.6
AM292359-1|CAL23171.2| 436|Tribolium castaneum gustatory recept... 20 2.6
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 19 3.5
AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 19 3.5
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 19 4.6
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 19 4.6
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 19 4.6
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 19 4.6
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 19 4.6
AF264695-1|AAG13009.1| 100|Tribolium castaneum cephalothorax pr... 19 4.6
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 19 4.6
DQ855506-1|ABH88193.1| 124|Tribolium castaneum chemosensory pro... 19 6.1
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 19 6.1
>AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein
protein.
Length = 370
Score = 22.6 bits (46), Expect = 0.37
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +2
Query: 119 AQQPARGDGAGGP 157
A+ AR DGAGGP
Sbjct: 290 ARGAARADGAGGP 302
>DQ855492-1|ABH88179.1| 251|Tribolium castaneum chemosensory
protein 6 protein.
Length = 251
Score = 19.8 bits (39), Expect = 2.6
Identities = 10/34 (29%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +2
Query: 32 RILPAEHRLCCAQC-RRLRGGAVGAPPRVRAQQP 130
R+LP + CA+C + R A + R++ + P
Sbjct: 62 RVLPEALQTNCAKCTEKQRTAAYRSIKRLKKEYP 95
>AM292359-1|CAL23171.2| 436|Tribolium castaneum gustatory receptor
candidate 38 protein.
Length = 436
Score = 19.8 bits (39), Expect = 2.6
Identities = 7/27 (25%), Positives = 16/27 (59%)
Frame = +3
Query: 6 RHAAALLDYGFYLLNIDCVVHSVAVYE 86
R A++DY F + + +++ + +YE
Sbjct: 125 RFEEAVIDYLFTVYLLPIIINPLVLYE 151
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 19.4 bits (38), Expect = 3.5
Identities = 11/44 (25%), Positives = 21/44 (47%)
Frame = +2
Query: 14 RRLTRLRILPAEHRLCCAQCRRLRGGAVGAPPRVRAQQPARGDG 145
R LTR R + H LC + R+++ + + + +G+G
Sbjct: 265 RYLTRRRRIEIAHALCLTE-RQIKIWFQNRRMKWKKENKTKGEG 307
>AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless
protein.
Length = 325
Score = 19.4 bits (38), Expect = 3.5
Identities = 11/44 (25%), Positives = 21/44 (47%)
Frame = +2
Query: 14 RRLTRLRILPAEHRLCCAQCRRLRGGAVGAPPRVRAQQPARGDG 145
R LTR R + H LC + R+++ + + + +G+G
Sbjct: 267 RYLTRRRRIEIAHALCLTE-RQIKIWFQNRRMKWKKENKTKGEG 309
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 19.0 bits (37), Expect = 4.6
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = +2
Query: 14 RRLTRLRILPAEHRLCCAQ 70
R LTR R + H LC +
Sbjct: 243 RYLTRRRRIEIAHALCLTE 261
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 19.0 bits (37), Expect = 4.6
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = +2
Query: 14 RRLTRLRILPAEHRLCCAQ 70
R LTR R + H LC +
Sbjct: 243 RYLTRRRRIEIAHALCLTE 261
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 19.0 bits (37), Expect = 4.6
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = +2
Query: 14 RRLTRLRILPAEHRLCCAQ 70
R LTR R + H LC +
Sbjct: 243 RYLTRRRRIEIAHALCLTE 261
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 19.0 bits (37), Expect = 4.6
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = +2
Query: 14 RRLTRLRILPAEHRLCCAQ 70
R LTR R + H LC +
Sbjct: 199 RYLTRRRRIEIAHALCLTE 217
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 19.0 bits (37), Expect = 4.6
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = +2
Query: 14 RRLTRLRILPAEHRLCCAQ 70
R LTR R + H LC +
Sbjct: 243 RYLTRRRRIEIAHALCLTE 261
>AF264695-1|AAG13009.1| 100|Tribolium castaneum cephalothorax
protein.
Length = 100
Score = 19.0 bits (37), Expect = 4.6
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = +2
Query: 14 RRLTRLRILPAEHRLCCAQ 70
R LTR R + H LC +
Sbjct: 31 RYLTRRRRIEIAHALCLTE 49
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 19.0 bits (37), Expect = 4.6
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = +2
Query: 14 RRLTRLRILPAEHRLCCAQ 70
R LTR R + H LC +
Sbjct: 243 RYLTRRRRIEIAHALCLTE 261
>DQ855506-1|ABH88193.1| 124|Tribolium castaneum chemosensory
protein 20 protein.
Length = 124
Score = 18.6 bits (36), Expect = 6.1
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = +2
Query: 32 RILPAEHRLCCAQC 73
R+LP + CA+C
Sbjct: 64 RVLPDALKTSCAKC 77
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 18.6 bits (36), Expect = 6.1
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +2
Query: 14 RRLTRLRILPAEHRLC 61
R LTR R + H LC
Sbjct: 243 RYLTRRRRIEIAHALC 258
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.313 0.148 0.518
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,683
Number of Sequences: 336
Number of extensions: 282
Number of successful extensions: 20
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 43
effective length of database: 108,137
effective search space used: 2162740
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.1 bits)
- SilkBase 1999-2023 -