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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_A12
         (192 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0581 + 23404809-23405885,23406434-23406580,23406688-23407056     31   0.098
12_02_0779 + 23082577-23082903,23083347-23083543,23084346-230844...    29   0.39 
03_06_0233 + 32530174-32530492,32531081-32531127,32531277-325314...    29   0.39 
11_03_0184 + 11317787-11318198,11318337-11318671,11318756-113190...    28   0.91 
11_06_0152 + 20669949-20670326,20670887-20670997,20671079-206712...    27   1.6  
06_03_0322 - 19560242-19560671,19560833-19561122                       27   1.6  
03_02_0461 - 8658494-8658876,8659791-8659859,8661746-8662187           27   1.6  
12_01_0849 + 7948693-7948996,7949829-7950610                           27   2.1  
07_03_1350 - 25955624-25955842,25955877-25955922,25956456-25956751     27   2.1  
04_04_0316 - 24338774-24339367                                         27   2.1  
02_02_0259 - 8379640-8380209                                           27   2.1  
09_01_0013 - 355103-355435                                             26   3.7  
08_02_0410 - 16842306-16842950,16844994-16845182                       26   3.7  
07_01_1021 + 8736032-8736106,8736336-8736374,8737362-8737493,873...    26   3.7  
02_01_0370 + 2659704-2660012,2660318-2660488,2660981-2661058,266...    26   3.7  
01_02_0015 + 10191793-10191957,10192085-10192229,10192331-101924...    26   3.7  
12_02_0986 + 25055674-25056571,25057741-25057782,25058651-25059888     26   4.9  
08_02_0739 + 20584264-20584626,20586943-20587011,20587696-205880...    26   4.9  
04_04_1330 - 32700333-32700770                                         26   4.9  
03_01_0607 + 4464669-4465367,4466212-4467369,4468005-4469114,446...    26   4.9  
02_04_0174 - 20607745-20608998                                         26   4.9  
02_01_0509 + 3694689-3695683,3695799-3695946,3696864-3696943,369...    26   4.9  
01_05_0117 - 18300157-18301106,18301149-18301543,18302592-183026...    26   4.9  
11_01_0429 - 3288081-3288781,3290038-3290293                           25   6.4  
08_02_1362 + 26406710-26408530                                         25   6.4  
05_06_0047 + 25166628-25166761,25167028-25167040                       25   6.4  
05_01_0570 + 5061600-5062142,5062790-5062972                           25   6.4  
04_03_0266 + 13648287-13649099,13649186-13649524                       25   6.4  
01_05_0386 - 21683909-21685334,21685513-21685541                       25   6.4  
10_07_0187 - 13919143-13919901                                         25   8.5  
09_02_0258 - 6380702-6380758,6380767-6380794,6381352-6381467,638...    25   8.5  
08_01_0804 - 7774631-7775152,7775985-7776083                           25   8.5  
07_01_0907 - 7636725-7637681                                           25   8.5  
06_03_0063 - 16124189-16124467                                         25   8.5  
06_01_0020 + 212055-213440                                             25   8.5  
05_07_0102 + 27700395-27700426,27701034-27702087,27703205-27703420     25   8.5  
05_01_0091 + 602481-602721,602819-602901,603431-603560,604188-60...    25   8.5  
04_04_0176 - 23329589-23331043                                         25   8.5  
03_05_0161 + 21400580-21401695                                         25   8.5  
01_01_0213 + 1833221-1835062,1835429-1835558,1835726-1836411           25   8.5  

>01_05_0581 + 23404809-23405885,23406434-23406580,23406688-23407056
          Length = 530

 Score = 31.5 bits (68), Expect = 0.098
 Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 5/53 (9%)
 Frame = +2

Query: 29  LRILPAEHRLCCAQCRRLRGGAVGAPPRVRAQQPARGDGAGG-----PRVRAL 172
           L +LPA+   CCA   RLR      P       P  GDG G      PR+R L
Sbjct: 193 LHVLPADLLQCCAALERLRVCVWRFPATAGVLHPGGGDGDGAAPPSFPRLREL 245


>12_02_0779 +
           23082577-23082903,23083347-23083543,23084346-23084481,
           23084558-23084794,23084885-23085108,23085434-23085551,
           23086080-23086319,23086423-23086673,23088397-23088484,
           23088576-23088727,23089670-23089811
          Length = 703

 Score = 29.5 bits (63), Expect = 0.39
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = +2

Query: 50  HRLCCAQCRRLRGGAVGAPPRVRAQQPARGDGAGGPR 160
           ++ C    R+ R  A   PP VRA   A G G GG R
Sbjct: 6   YKYCMCFTRKFRSPAADPPPDVRAAFLAAGGGDGGLR 42


>03_06_0233 +
           32530174-32530492,32531081-32531127,32531277-32531413,
           32531673-32531841,32532598-32532885,32533021-32533107,
           32533454-32534152,32534244-32534735
          Length = 745

 Score = 29.5 bits (63), Expect = 0.39
 Identities = 18/54 (33%), Positives = 20/54 (37%)
 Frame = +2

Query: 11  RRRLTRLRILPAEHRLCCAQCRRLRGGAVGAPPRVRAQQPARGDGAGGPRVRAL 172
           RR  +R    P E     A  RRL   A  A        P +G G GG  V  L
Sbjct: 15  RRPASRAAATPYERPPAAAAARRLAAAAAAAAAEAEDAYPPQGGGGGGGWVSRL 68


>11_03_0184 +
           11317787-11318198,11318337-11318671,11318756-11319048,
           11319125-11319483,11319549-11319748,11319823-11320012,
           11320084-11320188,11320262-11320338,11320428-11320649
          Length = 730

 Score = 28.3 bits (60), Expect = 0.91
 Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
 Frame = +2

Query: 104 PPRVRAQQPAR--GDGAGGPRVRA 169
           PP  + Q P R  G G+GGPR+R+
Sbjct: 258 PPIAQRQSPRRQTGQGSGGPRIRS 281


>11_06_0152 +
           20669949-20670326,20670887-20670997,20671079-20671280,
           20671393-20671675,20672145-20672234,20672366-20672473,
           20672595-20672975,20673250-20673324,20673685-20673797,
           20676233-20676742,20676807-20677300
          Length = 914

 Score = 27.5 bits (58), Expect = 1.6
 Identities = 19/34 (55%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
 Frame = +2

Query: 74  RRLRGG--AVGAPPRVRAQQPARGDGAGGPRVRA 169
           RR  GG  AVG  P V  Q PARG G GG + RA
Sbjct: 860 RRGGGGVRAVGGVPPV--QGPARGGGGGGVQGRA 891


>06_03_0322 - 19560242-19560671,19560833-19561122
          Length = 239

 Score = 27.5 bits (58), Expect = 1.6
 Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
 Frame = +2

Query: 50  HRLCCAQCRRLRGGAVGAPPRVRAQQPARGDGAGGP--RVRALRAG 181
           HR CC   RRL  GA+      R    A   G GGP   +R +R G
Sbjct: 181 HRWCCHIGRRLAAGALVLQGLRRRGIGAMAVGVGGPFGTLRRVRVG 226


>03_02_0461 - 8658494-8658876,8659791-8659859,8661746-8662187
          Length = 297

 Score = 27.5 bits (58), Expect = 1.6
 Identities = 19/48 (39%), Positives = 24/48 (50%)
 Frame = +2

Query: 11  RRRLTRLRILPAEHRLCCAQCRRLRGGAVGAPPRVRAQQPARGDGAGG 154
           RRRL   R      R   A  RR  GG+ G   R+RA++  +G G GG
Sbjct: 73  RRRLRTRRTGAGGGRRTGASRRRPSGGSCGLRRRLRARR--KGTGGGG 118


>12_01_0849 + 7948693-7948996,7949829-7950610
          Length = 361

 Score = 27.1 bits (57), Expect = 2.1
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = +2

Query: 41  PAEHRLCCAQCRRLRGGAVGAPPRVRAQQPARGDGAGGP 157
           P      C + RRLR  ++  PP  R+  PAR   A  P
Sbjct: 319 PLHPNPACVRYRRLRSSSLTTPPVGRSSLPARRLAAPPP 357


>07_03_1350 - 25955624-25955842,25955877-25955922,25956456-25956751
          Length = 186

 Score = 27.1 bits (57), Expect = 2.1
 Identities = 17/45 (37%), Positives = 22/45 (48%)
 Frame = +2

Query: 17  RLTRLRILPAEHRLCCAQCRRLRGGAVGAPPRVRAQQPARGDGAG 151
           +L  L++ P E R   A C    G AV     VR+ QP  G+G G
Sbjct: 87  KLACLKLRPPEPREKVAWCCSRNGAAV----EVRSAQPGGGEGGG 127


>04_04_0316 - 24338774-24339367
          Length = 197

 Score = 27.1 bits (57), Expect = 2.1
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = +2

Query: 47  EHRLCCAQCRRLRGGAVGAPPRVRAQQP 130
           EH L C +CR+        P R R QQP
Sbjct: 83  EHGLSCPECRKKARSVRVLPWRARPQQP 110


>02_02_0259 - 8379640-8380209
          Length = 189

 Score = 27.1 bits (57), Expect = 2.1
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = +2

Query: 62  CAQCRRLRGGAVGAPPRVRAQQPARGDGAGG 154
           CA C  L G A+ A P     +PA  DG GG
Sbjct: 72  CATCG-LVGAAIDALPAFAYARPAADDGGGG 101


>09_01_0013 - 355103-355435
          Length = 110

 Score = 26.2 bits (55), Expect = 3.7
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = +2

Query: 131 ARGDGAGGPRVRALRAGVLL 190
           ARGD AGG RVR  R  + L
Sbjct: 2   ARGDAAGGRRVRRPRTAIRL 21


>08_02_0410 - 16842306-16842950,16844994-16845182
          Length = 277

 Score = 26.2 bits (55), Expect = 3.7
 Identities = 18/49 (36%), Positives = 21/49 (42%)
 Frame = +2

Query: 20  LTRLRILPAEHRLCCAQCRRLRGGAVGAPPRVRAQQPARGDGAGGPRVR 166
           L +L +  A  R   A  RR   G +G      A   ARGDG  G R R
Sbjct: 71  LRQLVLTRAAGREAEAGARRGEEGELGLAAEAAASASARGDGGEGRRWR 119


>07_01_1021 +
           8736032-8736106,8736336-8736374,8737362-8737493,
           8737848-8737892,8738450-8739157,8740679-8740807,
           8741290-8741346,8742937-8742954
          Length = 400

 Score = 26.2 bits (55), Expect = 3.7
 Identities = 17/35 (48%), Positives = 18/35 (51%)
 Frame = +2

Query: 77  RLRGGAVGAPPRVRAQQPARGDGAGGPRVRALRAG 181
           R RGG  GA        PARG GA G R  A R+G
Sbjct: 172 RWRGGTAGA-------SPARGGGAVGRRWAAARSG 199


>02_01_0370 +
           2659704-2660012,2660318-2660488,2660981-2661058,
           2661658-2661803,2662001-2662112,2662280-2662405,
           2662618-2662731
          Length = 351

 Score = 26.2 bits (55), Expect = 3.7
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +3

Query: 66  HSVAVYEEALSALRRVYGRSSLH 134
           +SV   EEA  A+RR+ G+S  H
Sbjct: 326 YSVETLEEAKEAIRRILGKSRWH 348


>01_02_0015 +
           10191793-10191957,10192085-10192229,10192331-10192419,
           10193009-10193063,10193607-10193692,10194006-10194065
          Length = 199

 Score = 26.2 bits (55), Expect = 3.7
 Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
 Frame = +2

Query: 35  ILPAEHRLCCAQCRRLRGGAVGAPPRVRAQ-QPA-RGDGA 148
           + P  HRL    C R    + G P R+R +  PA RG GA
Sbjct: 13  LAPPRHRLLSLGCARTAAPSGGLPLRLRLRSSPAPRGHGA 52


>12_02_0986 + 25055674-25056571,25057741-25057782,25058651-25059888
          Length = 725

 Score = 25.8 bits (54), Expect = 4.9
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = +2

Query: 56  LCCAQCRRLRGG 91
           LCCA+CRR  GG
Sbjct: 327 LCCARCRRSGGG 338


>08_02_0739 +
           20584264-20584626,20586943-20587011,20587696-20588006,
           20588447-20588648,20588887-20588958
          Length = 338

 Score = 25.8 bits (54), Expect = 4.9
 Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
 Frame = +2

Query: 20  LTRLRILPAEHRLCCA-QCRRLRGGAVGAP 106
           L  L  LP    L CA  CRRLR    G P
Sbjct: 31  LLSLAYLPLRELLSCAGACRRLRDAVAGDP 60


>04_04_1330 - 32700333-32700770
          Length = 145

 Score = 25.8 bits (54), Expect = 4.9
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +2

Query: 26  RLRILPAEHRLCCAQCRRLRGGAVG 100
           +L +LP+ HRL  A  RR  GG+ G
Sbjct: 6   QLSLLPSPHRLARAGSRRRGGGSDG 30


>03_01_0607 +
           4464669-4465367,4466212-4467369,4468005-4469114,
           4469273-4469314,4469496-4469572,4469671-4469755,
           4469818-4469901,4469988-4470089,4470181-4470279,
           4470794-4470919
          Length = 1193

 Score = 25.8 bits (54), Expect = 4.9
 Identities = 12/24 (50%), Positives = 12/24 (50%)
 Frame = +2

Query: 95  VGAPPRVRAQQPARGDGAGGPRVR 166
           V APP      P  G G GGPR R
Sbjct: 48  VAAPPPPHHLAPRGGGGGGGPRRR 71


>02_04_0174 - 20607745-20608998
          Length = 417

 Score = 25.8 bits (54), Expect = 4.9
 Identities = 17/41 (41%), Positives = 21/41 (51%)
 Frame = +2

Query: 56  LCCAQCRRLRGGAVGAPPRVRAQQPARGDGAGGPRVRALRA 178
           LC A+  R R  A GA   + A++ A G G  G   RAL A
Sbjct: 268 LCLAKENRPRAVAAGAAAAL-ARRVAEGGGGAGEPERALAA 307


>02_01_0509 +
           3694689-3695683,3695799-3695946,3696864-3696943,
           3697214-3698062,3698193-3698337,3698426-3698677,
           3698780-3699089,3699415-3699524
          Length = 962

 Score = 25.8 bits (54), Expect = 4.9
 Identities = 14/35 (40%), Positives = 15/35 (42%)
 Frame = +2

Query: 50  HRLCCAQCRRLRGGAVGAPPRVRAQQPARGDGAGG 154
           H L  A  RR R G   +PP  R       DG GG
Sbjct: 31  HALAAAP-RRARSGRHASPPPQRVAPEEEDDGGGG 64


>01_05_0117 - 18300157-18301106,18301149-18301543,18302592-18302681,
            18303723-18303836,18303903-18304046,18316147-18316312,
            18316396-18317130,18317219-18317422,18317496-18318177,
            18318272-18318528,18318604-18319298,18319345-18319382,
            18319847-18319928,18320018-18320112,18320443-18320526,
            18320601-18320891,18321521-18321853,18321948-18322150,
            18322243-18322399,18322482-18322585,18322675-18322835,
            18323511-18323824,18324317-18324589,18324666-18324967,
            18325459-18325549,18326140-18326190,18326700-18326768,
            18326926-18327017,18327082-18327148,18328582-18328746,
            18329027-18329103,18329572-18329766,18330208-18330275,
            18331081-18331172,18331399-18331522,18331608-18331705,
            18332384-18332997,18333620-18333626
          Length = 2892

 Score = 25.8 bits (54), Expect = 4.9
 Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = +2

Query: 74   RRLRG-GAVGAPPRVRAQQPARGDGAGGPRVRALRAG 181
            +RL G G V         Q  RGDG    ++R LRAG
Sbjct: 1361 KRLNGMGQVCTVHEAHCAQDRRGDGVRPRQIRRLRAG 1397


>11_01_0429 - 3288081-3288781,3290038-3290293
          Length = 318

 Score = 25.4 bits (53), Expect = 6.4
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +2

Query: 101 APPRVRAQQPARGDGAGG 154
           A PR +A  P+ GD AGG
Sbjct: 105 ASPREQASSPSSGDAAGG 122


>08_02_1362 + 26406710-26408530
          Length = 606

 Score = 25.4 bits (53), Expect = 6.4
 Identities = 13/28 (46%), Positives = 14/28 (50%)
 Frame = +2

Query: 98  GAPPRVRAQQPARGDGAGGPRVRALRAG 181
           G+PPR  A  P     A G   R LRAG
Sbjct: 148 GSPPRRDALSPEAAASASGVADRMLRAG 175


>05_06_0047 + 25166628-25166761,25167028-25167040
          Length = 48

 Score = 25.4 bits (53), Expect = 6.4
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +2

Query: 131 ARGDGAGGPRVRALRAG 181
           +RGDGA G R  + RAG
Sbjct: 22  SRGDGAAGSRAESARAG 38


>05_01_0570 + 5061600-5062142,5062790-5062972
          Length = 241

 Score = 25.4 bits (53), Expect = 6.4
 Identities = 13/23 (56%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
 Frame = +2

Query: 110 RVRAQQPA-RGDGAGGPRVRALR 175
           R R++  A RGDG GG R RA+R
Sbjct: 146 RARSRLSAGRGDGVGGARGRAVR 168


>04_03_0266 + 13648287-13649099,13649186-13649524
          Length = 383

 Score = 25.4 bits (53), Expect = 6.4
 Identities = 10/24 (41%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
 Frame = +2

Query: 104 PPRVRAQQPAR--GDGAGGPRVRA 169
           PP  + + P R  G G+GGP++R+
Sbjct: 280 PPIAQRRSPRRQTGQGSGGPKIRS 303


>01_05_0386 - 21683909-21685334,21685513-21685541
          Length = 484

 Score = 25.4 bits (53), Expect = 6.4
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = +2

Query: 65  AQCRRLRGGAVGAPPRVRAQQPARGDGAGGPRVRALRA 178
           +QC R+RGG  G     + ++P R   A  P   A  A
Sbjct: 222 SQCERVRGGGGGGGCGRKQRRPGRKRKAAEPTAAAAAA 259


>10_07_0187 - 13919143-13919901
          Length = 252

 Score = 25.0 bits (52), Expect = 8.5
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +2

Query: 80  LRGGAVGAPPRVRAQQPARGDGAGGP 157
           LRG A   PP     + + G G GGP
Sbjct: 193 LRGDAAMLPPHEMVARASAGGGFGGP 218


>09_02_0258 -
           6380702-6380758,6380767-6380794,6381352-6381467,
           6382318-6382435,6382542-6382721,6383214-6383313,
           6384315-6384618
          Length = 300

 Score = 25.0 bits (52), Expect = 8.5
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = +2

Query: 107 PRVRAQQPARGDGAGGPRVRALRAGVLL 190
           P   A +PARGD A  P     R  +LL
Sbjct: 61  PTAAAAEPARGDAAPAPAAPPRRRLILL 88


>08_01_0804 - 7774631-7775152,7775985-7776083
          Length = 206

 Score = 25.0 bits (52), Expect = 8.5
 Identities = 14/42 (33%), Positives = 16/42 (38%)
 Frame = +2

Query: 41  PAEHRLCCAQCRRLRGGAVGAPPRVRAQQPARGDGAGGPRVR 166
           P     C   C    GGA      VR +  AR    GGP V+
Sbjct: 96  PISETPCSPSCSGKHGGAEEDQVDVRREDKARRARVGGPGVQ 137


>07_01_0907 - 7636725-7637681
          Length = 318

 Score = 25.0 bits (52), Expect = 8.5
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +2

Query: 89  GAVGAPPRVRAQQPARGDGAGG 154
           G V APP  + Q P   DG GG
Sbjct: 109 GGVMAPPHAQLQLPFGFDGGGG 130


>06_03_0063 - 16124189-16124467
          Length = 92

 Score = 25.0 bits (52), Expect = 8.5
 Identities = 15/45 (33%), Positives = 20/45 (44%)
 Frame = +2

Query: 41  PAEHRLCCAQCRRLRGGAVGAPPRVRAQQPARGDGAGGPRVRALR 175
           PA H       +R+R G + APP           G+G  R+RA R
Sbjct: 40  PARHGCGRGNDKRMRAGGMAAPPPSLIGGGHDVGGSGTARLRAPR 84


>06_01_0020 + 212055-213440
          Length = 461

 Score = 25.0 bits (52), Expect = 8.5
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = +2

Query: 14  RRLTRLRILPAEHRLCCAQCRRLRGGAVGAPPR 112
           R +TR R LPAE +  C      RG    A PR
Sbjct: 280 RCITRARRLPAEQQTMCRAAINNRGRLQPALPR 312


>05_07_0102 + 27700395-27700426,27701034-27702087,27703205-27703420
          Length = 433

 Score = 25.0 bits (52), Expect = 8.5
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +2

Query: 83  RGGAVGAPPRVRAQQPARGDGAGG 154
           RGG  G P    + +P RGDG  G
Sbjct: 41  RGGGGGGPRGSGSSKPRRGDGGLG 64


>05_01_0091 +
           602481-602721,602819-602901,603431-603560,604188-604267,
           604353-604442,605019-605143,605702-605762,605839-605889,
           605976-606053,606136-606241,606333-606478,607054-607176
          Length = 437

 Score = 25.0 bits (52), Expect = 8.5
 Identities = 13/21 (61%), Positives = 13/21 (61%)
 Frame = +2

Query: 41  PAEHRLCCAQCRRLRGGAVGA 103
           PA H L     RR RGGAVGA
Sbjct: 11  PASHHLRLWWRRRGRGGAVGA 31


>04_04_0176 - 23329589-23331043
          Length = 484

 Score = 25.0 bits (52), Expect = 8.5
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = +2

Query: 80  LRGGAVGAPPRVRAQQPARGDGAG 151
           L GG  G  P V A + ARG G G
Sbjct: 208 LGGGGGGDDPHVHAPRAARGRGRG 231


>03_05_0161 + 21400580-21401695
          Length = 371

 Score = 25.0 bits (52), Expect = 8.5
 Identities = 13/23 (56%), Positives = 14/23 (60%)
 Frame = +2

Query: 83  RGGAVGAPPRVRAQQPARGDGAG 151
           +GGAVG  P  R Q PA G G G
Sbjct: 167 QGGAVGMLPLPRLQSPA-GGGVG 188


>01_01_0213 + 1833221-1835062,1835429-1835558,1835726-1836411
          Length = 885

 Score = 25.0 bits (52), Expect = 8.5
 Identities = 14/34 (41%), Positives = 15/34 (44%)
 Frame = +2

Query: 89  GAVGAPPRVRAQQPARGDGAGGPRVRALRAGVLL 190
           G VGAPP  R  Q  R      P  RA    V+L
Sbjct: 105 GPVGAPPAARRPQKQRKVEVASPTPRADEPDVVL 138


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.313    0.148    0.518 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,470,908
Number of Sequences: 37544
Number of extensions: 64935
Number of successful extensions: 410
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 397
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 410
length of database: 14,793,348
effective HSP length: 43
effective length of database: 13,178,956
effective search space used: 263579120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)

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