Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_A11
(497 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8 ... 294 4e-82
AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase prot... 22 4.1
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 22 4.1
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 22 4.1
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 21 5.4
AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein. 21 5.4
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 21 5.4
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 21 5.4
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 21 7.1
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 21 9.4
>AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8
protein.
Length = 208
Score = 294 bits (721), Expect = 4e-82
Identities = 133/154 (86%), Positives = 144/154 (93%)
Frame = +1
Query: 34 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGGNTKYRALRL 213
MGISRDHWHKRRATGGKR PIRKKRK+ELGRPAANTKLGPQRIH VR+RGGN KYRALRL
Sbjct: 1 MGISRDHWHKRRATGGKRKPIRKKRKFELGRPAANTKLGPQRIHTVRTRGGNKKYRALRL 60
Query: 214 DTGNFAWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYLLP 393
DTGNF+WGSEC+TRKTRIIDVVYNASNNELVRTKTLVKNAIV +DATPFRQWYE HY+LP
Sbjct: 61 DTGNFSWGSECTTRKTRIIDVVYNASNNELVRTKTLVKNAIVTIDATPFRQWYEGHYVLP 120
Query: 394 LGRKKGAKLTEAEEAIINKKRSQKTAKKYLSRQR 495
LGRK+GAKLTEAEE ++NKKRS+K KY +RQR
Sbjct: 121 LGRKRGAKLTEAEEEVLNKKRSKKAEAKYKARQR 154
>AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase
protein.
Length = 693
Score = 21.8 bits (44), Expect = 4.1
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -3
Query: 285 IINNINNTSLAG 250
+INN NNTS+ G
Sbjct: 488 VINNRNNTSMKG 499
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 21.8 bits (44), Expect = 4.1
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +2
Query: 263 VLLMLFIMPLTMNWCVPKPW*RMLLSWWMPHL 358
VL + F P T N PW R + WMP L
Sbjct: 333 VLNVHFRSPSTHNM---SPWVRQVFLNWMPRL 361
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 21.8 bits (44), Expect = 4.1
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -2
Query: 265 YESCGLNIQIPMRSFQYQD 209
YE CGL + PM SFQ D
Sbjct: 653 YE-CGLRFEDPMISFQPGD 670
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 21.4 bits (43), Expect = 5.4
Identities = 10/35 (28%), Positives = 15/35 (42%)
Frame = -2
Query: 115 HTSSSYEWAHVCRP*PSSYANDHD*YPSLVPNSAR 11
HTS +EW + Y N + +P + N R
Sbjct: 124 HTSDQHEWFQLSLKNIEPYNNYYIWHPGKIVNGKR 158
>AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein.
Length = 349
Score = 21.4 bits (43), Expect = 5.4
Identities = 6/20 (30%), Positives = 11/20 (55%)
Frame = +2
Query: 263 VLLMLFIMPLTMNWCVPKPW 322
+L+ +MPL + W + W
Sbjct: 85 LLVTFLMMPLEIGWAITVSW 104
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 21.4 bits (43), Expect = 5.4
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = +1
Query: 403 KKGAKLTEAEEAIINKKRSQKTAKKY 480
KKG+ +T+ +I + ++K K+Y
Sbjct: 517 KKGSFVTQYVGEVITNEEAEKRGKEY 542
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 21.4 bits (43), Expect = 5.4
Identities = 10/35 (28%), Positives = 15/35 (42%)
Frame = -2
Query: 115 HTSSSYEWAHVCRP*PSSYANDHD*YPSLVPNSAR 11
HTS +EW + Y N + +P + N R
Sbjct: 124 HTSDQHEWFQLSLKNIEPYNNYYIWHPGKIVNGKR 158
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.0 bits (42), Expect = 7.1
Identities = 10/38 (26%), Positives = 20/38 (52%)
Frame = +1
Query: 253 RKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQ 366
RK + +VVY N + + V + I ++ A+P ++
Sbjct: 358 RKRPMHNVVYRPGENPVTQRLPAVLSRIGIILASPLKR 395
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 20.6 bits (41), Expect = 9.4
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +2
Query: 248 QPARLVLLMLFIMPLTMNW 304
QP L+ L+ MPL NW
Sbjct: 491 QPEPLIELIEHWMPLLPNW 509
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.317 0.132 0.389
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,537
Number of Sequences: 438
Number of extensions: 3492
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13618701
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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