Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_A10
         (212 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    30   0.009
AF444782-1|AAL37903.1|  576|Anopheles gambiae Toll9 protein.           21   3.9  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    21   6.9  
AY330181-1|AAQ16287.1|  156|Anopheles gambiae odorant-binding pr...    20   9.1  
AF515521-1|AAM61888.1|  233|Anopheles gambiae glutathione S-tran...    20   9.1  

>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 30.3 bits (65), Expect = 0.009
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -1

Query: 98  HWNSSQQQ**QP*RHIPSRTTLYHHHGIRYPR 3
           H+   QQQ  Q  RH+P +  ++H H  +YPR
Sbjct: 604 HYLPLQQQQQQQARHLPQQQAIHHIHQQQYPR 635


>AF444782-1|AAL37903.1|  576|Anopheles gambiae Toll9 protein.
          Length = 576

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -1

Query: 188 RQVNLYYLFIIH*R 147
           R VNL YLF+ H R
Sbjct: 15  RNVNLEYLFLSHNR 28


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein
          protein.
          Length = 1133

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 6/12 (50%), Positives = 11/12 (91%)
 Frame = +3

Query: 9  VANAVVVVECRA 44
          +A+A +V+EC+A
Sbjct: 58 IASAAIVIECQA 69


>AY330181-1|AAQ16287.1|  156|Anopheles gambiae odorant-binding
          protein AgamOBP55 protein.
          Length = 156

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 6/8 (75%), Positives = 6/8 (75%)
 Frame = +1

Query: 52 MCRHGCYY 75
          MC H CYY
Sbjct: 60 MCIHQCYY 67


>AF515521-1|AAM61888.1|  233|Anopheles gambiae glutathione
           S-transferase u1 protein.
          Length = 233

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +3

Query: 84  GGVPMKLLMQLITYNIPYIIISLVYNK 164
           G   + + M L   NIPY  +S+ Y K
Sbjct: 9   GPPSLAVRMALEALNIPYEHVSVDYGK 35


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,225
Number of Sequences: 2352
Number of extensions: 2567
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 48
effective length of database: 451,083
effective search space used:  9923826
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)