BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= S06A01NCLL0001_A10 (212 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z72502-15|CAN86590.1| 540|Caenorhabditis elegans Hypothetical p... 31 0.11 Z72502-14|CAA96584.2| 536|Caenorhabditis elegans Hypothetical p... 31 0.11 AC006769-16|AAF60588.2| 338|Caenorhabditis elegans Serpentine r... 26 4.2 AF098999-6|AAC68724.2| 787|Caenorhabditis elegans Half transpor... 25 7.3 Z70780-1|CAA94819.1| 336|Caenorhabditis elegans Hypothetical pr... 25 9.7 >Z72502-15|CAN86590.1| 540|Caenorhabditis elegans Hypothetical protein C08B6.1b protein. Length = 540 Score = 31.1 bits (67), Expect = 0.11 Identities = 13/34 (38%), Positives = 22/34 (64%) Frame = -2 Query: 205 FFFLSYGKLICIIYLLYTKEIIIYGILYVINCIK 104 F F SY L+ + +L+ T ++++ +LYV CIK Sbjct: 496 FQFYSYDILVVVCFLIIT--VVVFIVLYVFQCIK 527 >Z72502-14|CAA96584.2| 536|Caenorhabditis elegans Hypothetical protein C08B6.1a protein. Length = 536 Score = 31.1 bits (67), Expect = 0.11 Identities = 13/34 (38%), Positives = 22/34 (64%) Frame = -2 Query: 205 FFFLSYGKLICIIYLLYTKEIIIYGILYVINCIK 104 F F SY L+ + +L+ T ++++ +LYV CIK Sbjct: 492 FQFYSYDILVVVCFLIIT--VVVFIVLYVFQCIK 523 >AC006769-16|AAF60588.2| 338|Caenorhabditis elegans Serpentine receptor, class j protein20 protein. Length = 338 Score = 25.8 bits (54), Expect = 4.2 Identities = 8/17 (47%), Positives = 14/17 (82%) Frame = -2 Query: 205 FFFLSYGKLICIIYLLY 155 F+F+ YG L+ +IY+L+ Sbjct: 125 FYFMPYGLLLSVIYVLF 141 >AF098999-6|AAC68724.2| 787|Caenorhabditis elegans Half transporter (pgp related)protein 4 protein. Length = 787 Score = 25.0 bits (52), Expect = 7.3 Identities = 13/32 (40%), Positives = 17/32 (53%) Frame = -2 Query: 190 YGKLICIIYLLYTKEIIIYGILYVINCIKSFI 95 YGKL + + TK I G L+V +SFI Sbjct: 386 YGKLTHTLDVTRTKAIAYIGFLWVSELFQSFI 417 >Z70780-1|CAA94819.1| 336|Caenorhabditis elegans Hypothetical protein F46B6.2 protein. Length = 336 Score = 24.6 bits (51), Expect = 9.7 Identities = 12/30 (40%), Positives = 15/30 (50%) Frame = -2 Query: 211 FFFFFLSYGKLICIIYLLYTKEIIIYGILY 122 FFFFF S + CI Y E I G+ + Sbjct: 77 FFFFFSSLMETYCINEFKYADETIKDGVCH 106 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 3,957,411 Number of Sequences: 27780 Number of extensions: 56693 Number of successful extensions: 172 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 171 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 172 length of database: 12,740,198 effective HSP length: 50 effective length of database: 11,351,198 effective search space used: 227023960 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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