Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_A10
         (212 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              22   0.95 
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          20   2.9  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      20   2.9  
AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter...    20   3.8  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    20   3.8  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    20   3.8  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    19   6.7  

>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 21.8 bits (44), Expect = 0.95
 Identities = 7/10 (70%), Positives = 8/10 (80%), Gaps = 1/10 (10%)
 Frame = +1

Query: 67  CY-YCCWEEF 93
           CY YC WE+F
Sbjct: 71  CYMYCLWEQF 80


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 20.2 bits (40), Expect = 2.9
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 209 FFFFFKLRQVNLYYL 165
           F+FF   + +N YYL
Sbjct: 257 FYFFLHKQVLNRYYL 271


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 20.2 bits (40), Expect = 2.9
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 209 FFFFFKLRQVNLYYL 165
           F+FF   + +N YYL
Sbjct: 257 FYFFLHKQVLNRYYL 271


>AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter
           transporter-1A protein.
          Length = 203

 Score = 19.8 bits (39), Expect = 3.8
 Identities = 4/7 (57%), Positives = 6/7 (85%)
 Frame = +1

Query: 67  CYYCCWE 87
           CY+C W+
Sbjct: 187 CYFCIWK 193


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 19.8 bits (39), Expect = 3.8
 Identities = 4/7 (57%), Positives = 6/7 (85%)
 Frame = +1

Query: 67  CYYCCWE 87
           CY+C W+
Sbjct: 220 CYFCIWK 226



 Score = 19.0 bits (37), Expect = 6.7
 Identities = 5/7 (71%), Positives = 5/7 (71%)
 Frame = +1

Query: 64  GCYYCCW 84
           G Y CCW
Sbjct: 484 GYYPCCW 490


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 19.8 bits (39), Expect = 3.8
 Identities = 4/7 (57%), Positives = 6/7 (85%)
 Frame = +1

Query: 67  CYYCCWE 87
           CY+C W+
Sbjct: 273 CYFCIWK 279



 Score = 19.0 bits (37), Expect = 6.7
 Identities = 5/7 (71%), Positives = 5/7 (71%)
 Frame = +1

Query: 64  GCYYCCW 84
           G Y CCW
Sbjct: 537 GYYPCCW 543


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 19.0 bits (37), Expect = 6.7
 Identities = 5/6 (83%), Positives = 6/6 (100%)
 Frame = -1

Query: 149 RDYYIW 132
           +DYYIW
Sbjct: 146 KDYYIW 151


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,365
Number of Sequences: 438
Number of extensions: 899
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 45
effective length of database: 126,633
effective search space used:  3165825
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)