Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_A09
(418 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q7ZUG0 Cluster: Small nuclear ribonucleoprotein E; n=18... 157 6e-38
UniRef50_P62304 Cluster: Small nuclear ribonucleoprotein E; n=51... 157 9e-38
UniRef50_A4VCU1 Cluster: Small nuclear ribonucleoprotein E, puta... 107 1e-22
UniRef50_Q4MZX3 Cluster: Small nuclear ribonucleoprotein, putati... 105 4e-22
UniRef50_Q4PB34 Cluster: Putative uncharacterized protein; n=3; ... 103 1e-21
UniRef50_A3BPN8 Cluster: Putative uncharacterized protein; n=1; ... 101 6e-21
UniRef50_A3FQK4 Cluster: Small nuclear ribonucleoprotein, putati... 97 1e-19
UniRef50_A1CDT1 Cluster: Small nuclear ribonucleoprotein SmE, pu... 95 7e-19
UniRef50_UPI00004984BB Cluster: small nuclear ribonucleoprotein;... 94 1e-18
UniRef50_A0C1J5 Cluster: Chromosome undetermined scaffold_142, w... 91 6e-18
UniRef50_Q12330 Cluster: Small nuclear ribonucleoprotein E; n=3;... 91 6e-18
UniRef50_Q9U7L5 Cluster: SmE protein; n=3; Trypanosomatidae|Rep:... 79 4e-14
UniRef50_A2X0E3 Cluster: Putative uncharacterized protein; n=2; ... 71 7e-12
UniRef50_Q4Q7I2 Cluster: Small nuclear ribonucleoprotein polypep... 71 1e-11
UniRef50_A2EQ40 Cluster: Sm protein; n=1; Trichomonas vaginalis ... 64 8e-10
UniRef50_Q3LWL6 Cluster: MRNA splicing protein; n=1; Bigelowiell... 63 2e-09
UniRef50_Q9AVY1 Cluster: Putative small nuclear ribonucleoprotei... 58 7e-08
UniRef50_Q677D4 Cluster: Small nuclear ribonucleoprotein polypep... 48 1e-04
UniRef50_A7DR38 Cluster: Like-Sm ribonucleoprotein, core; n=1; C... 47 1e-04
UniRef50_Q4N5C8 Cluster: Small nuclear ribonucleoprotein B, puta... 45 7e-04
UniRef50_UPI000049841B Cluster: small nuclear ribonucleoprotein ... 44 0.001
UniRef50_Q979R0 Cluster: Small nuclear ribonucleoprotein; n=4; T... 44 0.002
UniRef50_Q74ZR8 Cluster: AGR130Wp; n=2; Saccharomycetales|Rep: A... 43 0.003
UniRef50_Q8IL38 Cluster: Small nuclear ribonuclear protein, puta... 42 0.004
UniRef50_Q8SSF1 Cluster: SMALL NUCLEAR RIBONUCLEOPROTEIN E; n=1;... 42 0.004
UniRef50_Q8TYS2 Cluster: Small nuclear ribonucleoprotein (SnRNP)... 42 0.004
UniRef50_A2DQD7 Cluster: Sm protein; n=1; Trichomonas vaginalis ... 42 0.007
UniRef50_A2R8P2 Cluster: Function: snRPG of H. sapiens is associ... 42 0.007
UniRef50_A7DRH4 Cluster: Like-Sm ribonucleoprotein, core; n=1; C... 41 0.009
UniRef50_UPI00015B4C2B Cluster: PREDICTED: similar to ENSANGP000... 41 0.012
UniRef50_Q2FT45 Cluster: Like-Sm ribonucleoprotein, core; n=3; M... 41 0.012
UniRef50_Q0UX37 Cluster: Predicted protein; n=1; Phaeosphaeria n... 40 0.016
UniRef50_O29885 Cluster: SnRNP, putative; n=1; Archaeoglobus ful... 40 0.021
UniRef50_Q9N4G9 Cluster: Probable small nuclear ribonucleoprotei... 40 0.021
UniRef50_A3FQF0 Cluster: Putative uncharacterized protein; n=2; ... 40 0.027
UniRef50_P57670 Cluster: Putative snRNP Sm-like protein; n=4; Th... 40 0.027
UniRef50_Q9VXE0 Cluster: Probable small nuclear ribonucleoprotei... 39 0.036
UniRef50_Q0WMZ9 Cluster: Sm-like protein; n=19; Eukaryota|Rep: S... 39 0.048
UniRef50_Q54RX0 Cluster: LSM (Like-Sm) domain-containing protein... 39 0.048
UniRef50_Q8TQX4 Cluster: Sm protein; n=8; Archaea|Rep: Sm protei... 39 0.048
UniRef50_Q05E36 Cluster: Putative small nucleolar RNP protein Sm... 39 0.048
UniRef50_A6R7U2 Cluster: Predicted protein; n=2; Eurotiomycetida... 38 0.063
UniRef50_Q8IB57 Cluster: Small nuclear ribonucleoprotein, putati... 38 0.083
UniRef50_Q54HH8 Cluster: Putative small nuclear ribonucleopartic... 38 0.083
UniRef50_Q2URY1 Cluster: Predicted protein; n=1; Aspergillus ory... 38 0.083
UniRef50_P40089 Cluster: U6 snRNA-associated Sm-like protein LSm... 38 0.083
UniRef50_Q9L9N8 Cluster: ORF06; n=9; Borrelia burgdorferi group|... 38 0.11
UniRef50_Q8IJN2 Cluster: Putative uncharacterized protein; n=1; ... 37 0.15
UniRef50_Q6BK43 Cluster: Similar to sp|P40089 Saccharomyces cere... 37 0.15
UniRef50_A0RYZ2 Cluster: Small nuclear ribonucleoprotein; n=2; T... 37 0.15
UniRef50_Q9YEQ5 Cluster: Putative snRNP Sm-like protein; n=1; Ae... 37 0.15
UniRef50_P62308 Cluster: Small nuclear ribonucleoprotein G; n=46... 37 0.15
UniRef50_Q5K900 Cluster: U6 snRNA binding protein, putative; n=1... 37 0.19
UniRef50_O26745 Cluster: Putative snRNP Sm-like protein; n=4; Eu... 37 0.19
UniRef50_Q00XA2 Cluster: Putative small nuclear ribonucleoprotei... 36 0.34
UniRef50_Q4YVP4 Cluster: Ribonucleoprotein, putative; n=3; Plasm... 36 0.34
UniRef50_Q4UHZ4 Cluster: (U6) snRNA-associated Sm-like protein, ... 36 0.44
UniRef50_A7ANM8 Cluster: Sm domain containing protein; n=1; Babe... 36 0.44
UniRef50_Q6CGF6 Cluster: Similar to tr|Q8IGS9 Drosophila melanog... 36 0.44
UniRef50_Q4PED8 Cluster: Putative uncharacterized protein; n=1; ... 36 0.44
UniRef50_O95777 Cluster: U6 snRNA-associated Sm-like protein LSm... 36 0.44
UniRef50_A5K5F8 Cluster: U6 snRNA-associated Sm-like protein LSm... 35 0.59
UniRef50_Q247T3 Cluster: Putative uncharacterized protein; n=1; ... 35 0.78
UniRef50_O42978 Cluster: U6 snRNP-associated protein Lsm5; n=4; ... 35 0.78
UniRef50_O74966 Cluster: Probable small nuclear ribonucleoprotei... 35 0.78
UniRef50_Q9W087 Cluster: CG2021-PA; n=14; Eukaryota|Rep: CG2021-... 34 1.0
UniRef50_Q5CME6 Cluster: Similar to small nuclear ribonucleoprot... 34 1.0
UniRef50_O29386 Cluster: Putative snRNP Sm-like protein; n=10; A... 34 1.0
UniRef50_Q54F84 Cluster: Putative uncharacterized protein; n=1; ... 34 1.4
UniRef50_Q4Q9J1 Cluster: Lsm7p protein, putative; n=6; Trypanoso... 34 1.4
UniRef50_A0CCJ3 Cluster: Chromosome undetermined scaffold_167, w... 34 1.4
UniRef50_Q59ZT4 Cluster: Potential RNA processing complex subuni... 34 1.4
UniRef50_Q98S49 Cluster: Small nuclear ribonucleoprotein F; n=1;... 33 1.8
UniRef50_Q8ILU8 Cluster: Ribonucleoprotein, putative; n=2; Plasm... 33 1.8
UniRef50_Q17E06 Cluster: Small nuclear ribonucleoprotein, core, ... 33 1.8
UniRef50_A1RY58 Cluster: Like-Sm ribonucleoprotein, core; n=1; T... 33 1.8
UniRef50_Q8U0P4 Cluster: Putative snRNP Sm-like protein; n=11; E... 33 1.8
UniRef50_Q6BPY4 Cluster: Debaryomyces hansenii chromosome E of s... 33 2.4
UniRef50_A6QY75 Cluster: Predicted protein; n=2; Fungi/Metazoa g... 33 2.4
UniRef50_Q8ZYP8 Cluster: Small nuclear ribonucleoprotein homolog... 33 2.4
UniRef50_Q115S2 Cluster: Protein splicing site; n=2; cellular or... 33 3.1
UniRef50_Q4Q3L7 Cluster: Small nuclear ribonucleoprotein SmD2; n... 33 3.1
UniRef50_A2D8C6 Cluster: Dynein heavy chain family protein; n=2;... 33 3.1
UniRef50_O74499 Cluster: U6 snRNP-associated protein Lsm7; n=19;... 33 3.1
UniRef50_Q701X8 Cluster: Putative uncharacterized protein; n=1; ... 33 3.1
UniRef50_Q00WM9 Cluster: Chromosome 13 contig 1, DNA sequence; n... 32 4.1
UniRef50_Q5DGC2 Cluster: SJCHGC05770 protein; n=1; Schistosoma j... 32 4.1
UniRef50_A3H6D3 Cluster: Like-Sm ribonucleoprotein, core; n=1; C... 32 4.1
UniRef50_UPI0000499A4F Cluster: small nuclear ribonucleoprotein ... 32 5.5
UniRef50_UPI0000F31710 Cluster: CDNA FLJ45698 fis, clone FEBRA20... 32 5.5
UniRef50_Q6G1Y4 Cluster: ABC transporter, ATP-binding protein; n... 32 5.5
UniRef50_Q2R066 Cluster: Small nuclear ribonucleoprotein F, puta... 32 5.5
UniRef50_Q7QPB0 Cluster: GLP_122_3813_3433; n=1; Giardia lamblia... 32 5.5
UniRef50_Q4N4E0 Cluster: Small nuclear ribonucleoprotein G, puta... 32 5.5
UniRef50_Q8ZYG5 Cluster: Small nuclear ribonucleoprotein homolog... 32 5.5
UniRef50_UPI00006CFE60 Cluster: hypothetical protein TTHERM_0069... 31 7.2
UniRef50_Q238V6 Cluster: Putative uncharacterized protein; n=1; ... 31 7.2
UniRef50_Q4P7M4 Cluster: Putative uncharacterized protein; n=1; ... 31 7.2
UniRef50_UPI00015A7DD8 Cluster: UPI00015A7DD8 related cluster; n... 31 9.6
UniRef50_A4S5K5 Cluster: Predicted protein; n=1; Ostreococcus lu... 31 9.6
UniRef50_Q7PT02 Cluster: ENSANGP00000018479; n=1; Anopheles gamb... 31 9.6
UniRef50_A0D0Y9 Cluster: Chromosome undetermined scaffold_33, wh... 31 9.6
UniRef50_Q0V2I0 Cluster: Predicted protein; n=1; Phaeosphaeria n... 31 9.6
UniRef50_A4RQ29 Cluster: U6 snRNA-associated Sm-like protein LSm... 31 9.6
UniRef50_P34659 Cluster: Probable small nuclear ribonucleoprotei... 31 9.6
UniRef50_Q4PSI6 Cluster: FBD-associated F-box protein At4g13985;... 31 9.6
>UniRef50_Q7ZUG0 Cluster: Small nuclear ribonucleoprotein E; n=18;
Eukaryota|Rep: Small nuclear ribonucleoprotein E - Danio
rerio (Zebrafish) (Brachydanio rerio)
Length = 92
Score = 157 bits (382), Expect = 6e-38
Identities = 72/91 (79%), Positives = 84/91 (92%), Gaps = 1/91 (1%)
Frame = +2
Query: 35 MAYKGP-PKVQKVMVQPINLIFRYLQNRSRVQIWLYENVNLRIEGHIVGFDEYMNIVLDE 211
MAY+G KVQKVMVQPINLIFRYLQNRSR+ +WLYE VN+RIEG I+GFDEYMN+VLD+
Sbjct: 1 MAYRGQGQKVQKVMVQPINLIFRYLQNRSRISVWLYEQVNMRIEGCIIGFDEYMNLVLDD 60
Query: 212 AEEVHMKTKNRKQIGRIMMKGDNITLIQNVN 304
AEEVHMKTKNRK +GRIM+KGDNITL+Q+V+
Sbjct: 61 AEEVHMKTKNRKPLGRIMLKGDNITLLQSVS 91
>UniRef50_P62304 Cluster: Small nuclear ribonucleoprotein E; n=51;
Eukaryota|Rep: Small nuclear ribonucleoprotein E - Homo
sapiens (Human)
Length = 92
Score = 157 bits (381), Expect = 9e-38
Identities = 71/91 (78%), Positives = 85/91 (93%), Gaps = 1/91 (1%)
Frame = +2
Query: 35 MAYKGP-PKVQKVMVQPINLIFRYLQNRSRVQIWLYENVNLRIEGHIVGFDEYMNIVLDE 211
MAY+G KVQKVMVQPINLIFRYLQNRSR+Q+WLYE VN+RIEG I+GFDEYMN+VLD+
Sbjct: 1 MAYRGQGQKVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDD 60
Query: 212 AEEVHMKTKNRKQIGRIMMKGDNITLIQNVN 304
AEE+H KTK+RKQ+GRIM+KGDNITL+Q+V+
Sbjct: 61 AEEIHSKTKSRKQLGRIMLKGDNITLLQSVS 91
>UniRef50_A4VCU1 Cluster: Small nuclear ribonucleoprotein E,
putative; n=1; Tetrahymena thermophila SB210|Rep: Small
nuclear ribonucleoprotein E, putative - Tetrahymena
thermophila SB210
Length = 140
Score = 107 bits (256), Expect = 1e-22
Identities = 45/82 (54%), Positives = 63/82 (76%)
Frame = +2
Query: 56 KVQKVMVQPINLIFRYLQNRSRVQIWLYENVNLRIEGHIVGFDEYMNIVLDEAEEVHMKT 235
K K + P+ IF +LQ + RVQIWL+EN +++EG I+GFDEYMN+VLDE EV KT
Sbjct: 4 KQTKTITNPLTTIFGFLQKQVRVQIWLFENTEIKLEGKIIGFDEYMNMVLDETSEVDCKT 63
Query: 236 KNRKQIGRIMMKGDNITLIQNV 301
+++IGRI++KG+NITLI+N+
Sbjct: 64 NQKREIGRILLKGENITLIRNL 85
>UniRef50_Q4MZX3 Cluster: Small nuclear ribonucleoprotein, putative;
n=2; Theileria|Rep: Small nuclear ribonucleoprotein,
putative - Theileria parva
Length = 91
Score = 105 bits (252), Expect = 4e-22
Identities = 47/79 (59%), Positives = 61/79 (77%)
Frame = +2
Query: 56 KVQKVMVQPINLIFRYLQNRSRVQIWLYENVNLRIEGHIVGFDEYMNIVLDEAEEVHMKT 235
K+QK+M QPIN IFR+ +RVQIWL++ N +IEG I GFDEYMN+VLD A EVH+K
Sbjct: 7 KLQKIMTQPINQIFRFFTGGTRVQIWLFDQPNTKIEGTIRGFDEYMNMVLDNATEVHVKK 66
Query: 236 KNRKQIGRIMMKGDNITLI 292
+K +GRI++KGD +TLI
Sbjct: 67 NVKKDVGRILLKGDCMTLI 85
>UniRef50_Q4PB34 Cluster: Putative uncharacterized protein; n=3;
Dikarya|Rep: Putative uncharacterized protein - Ustilago
maydis (Smut fungus)
Length = 136
Score = 103 bits (247), Expect = 1e-21
Identities = 45/74 (60%), Positives = 62/74 (83%), Gaps = 1/74 (1%)
Frame = +2
Query: 65 KVMVQPINLIFRYLQNRSRVQIWLYENVNLRIEGHIVGFDEYMNIVLDEAEEVHMKTKNR 244
KV VQPIN+IFR+LQ ++RV +WLY+NV+ RIEG I+GFDE+MN+ L +AEEV K N+
Sbjct: 6 KVSVQPINIIFRHLQQQTRVSLWLYDNVDFRIEGKIIGFDEFMNVTLADAEEVWTKKDNK 65
Query: 245 K-QIGRIMMKGDNI 283
+ ++GRI++KGDNI
Sbjct: 66 RVELGRILLKGDNI 79
>UniRef50_A3BPN8 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 111
Score = 101 bits (242), Expect = 6e-21
Identities = 46/83 (55%), Positives = 64/83 (77%)
Frame = +2
Query: 56 KVQKVMVQPINLIFRYLQNRSRVQIWLYENVNLRIEGHIVGFDEYMNIVLDEAEEVHMKT 235
KVQ++M QPI ++R+QIWL+E +LRIEG I+GFDEYMN+VLD+AEE+++K
Sbjct: 5 KVQRIMTQPI---------KARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEINVKK 55
Query: 236 KNRKQIGRIMMKGDNITLIQNVN 304
RK +GRI++KGDNITL+ N +
Sbjct: 56 DTRKSLGRILLKGDNITLMMNTS 78
>UniRef50_A3FQK4 Cluster: Small nuclear ribonucleoprotein, putative;
n=1; Cryptosporidium parvum Iowa II|Rep: Small nuclear
ribonucleoprotein, putative - Cryptosporidium parvum
Iowa II
Length = 92
Score = 97.1 bits (231), Expect = 1e-19
Identities = 44/81 (54%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Frame = +2
Query: 56 KVQKVMVQPINLIFRYLQNRSRVQIWLYENVNLRIEGHIVGFDEYMNIVLDEAEEVHMKT 235
K QK+M+QPIN IF ++ RVQIWLY++ NL +EG I GFDEYMNIVLD+A EV+ K
Sbjct: 8 KTQKMMLQPINQIFHLFTSKQRVQIWLYDHKNLVLEGVIQGFDEYMNIVLDQASEVYTKK 67
Query: 236 KNRKQ--IGRIMMKGDNITLI 292
+ R++ +G+++++G+NI+LI
Sbjct: 68 EVRRETSVGQLLLRGENISLI 88
>UniRef50_A1CDT1 Cluster: Small nuclear ribonucleoprotein SmE,
putative; n=12; Pezizomycotina|Rep: Small nuclear
ribonucleoprotein SmE, putative - Aspergillus clavatus
Length = 95
Score = 94.7 bits (225), Expect = 7e-19
Identities = 45/89 (50%), Positives = 63/89 (70%), Gaps = 4/89 (4%)
Frame = +2
Query: 47 GPPKVQKVMVQPINLIFRYLQNRSRVQIWLYENVNLRIEGHIVGFDEYMNIVLDEAEEVH 226
G +K ++ PI+ IF+ LQ R+ V IWLYE + RIEG I GFDE+MN+V+D+A EV
Sbjct: 6 GGGAARKTLLAPIHFIFKLLQQRTTVSIWLYEQLAFRIEGKIRGFDEFMNLVVDDAVEVR 65
Query: 227 MKTK----NRKQIGRIMMKGDNITLIQNV 301
M TK R+ +G+I++KGDN++LIQ V
Sbjct: 66 MATKTDEEKRRPLGQILLKGDNVSLIQAV 94
>UniRef50_UPI00004984BB Cluster: small nuclear ribonucleoprotein;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: small nuclear
ribonucleoprotein - Entamoeba histolytica HM-1:IMSS
Length = 89
Score = 93.9 bits (223), Expect = 1e-18
Identities = 38/82 (46%), Positives = 60/82 (73%)
Frame = +2
Query: 56 KVQKVMVQPINLIFRYLQNRSRVQIWLYENVNLRIEGHIVGFDEYMNIVLDEAEEVHMKT 235
K+ K M+ P+ I +++ RV IWL+EN LRIEG + GFD+Y+N+VL + EEV++KT
Sbjct: 5 KMTKAMILPVKFIVNLAKHKQRVSIWLFENTALRIEGTLSGFDQYINLVLTDTEEVYLKT 64
Query: 236 KNRKQIGRIMMKGDNITLIQNV 301
R++IG I++KG+NI++I +
Sbjct: 65 NTRRKIGTILLKGENISVISKI 86
>UniRef50_A0C1J5 Cluster: Chromosome undetermined scaffold_142,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_142,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 95
Score = 91.5 bits (217), Expect = 6e-18
Identities = 38/82 (46%), Positives = 59/82 (71%)
Frame = +2
Query: 56 KVQKVMVQPINLIFRYLQNRSRVQIWLYENVNLRIEGHIVGFDEYMNIVLDEAEEVHMKT 235
K QK + QP++ F +++++IWL EN NLRI+G + GFDEY+N+VLD A E KT
Sbjct: 9 KPQKKITQPLHAFFTLFTEKTQLEIWLVENDNLRIQGKLAGFDEYLNLVLDRAVEYDRKT 68
Query: 236 KNRKQIGRIMMKGDNITLIQNV 301
K K++G+I++KG+NI L++ +
Sbjct: 69 KATKELGKILLKGENIVLVRTL 90
>UniRef50_Q12330 Cluster: Small nuclear ribonucleoprotein E; n=3;
Saccharomycetaceae|Rep: Small nuclear ribonucleoprotein
E - Saccharomyces cerevisiae (Baker's yeast)
Length = 94
Score = 91.5 bits (217), Expect = 6e-18
Identities = 42/87 (48%), Positives = 63/87 (72%), Gaps = 7/87 (8%)
Frame = +2
Query: 65 KVMVQPINLIFRYLQNRSRVQIWLYENVNLRIEGHIVGFDEYMNIVLDEAEEVHMKTKNR 244
K MV PIN IF +LQ ++ V IWL+E + +RI+G IVGFDE+MN+V+DEA E+ + + +
Sbjct: 8 KAMVPPINCIFNFLQQQTPVTIWLFEQIGIRIKGKIVGFDEFMNVVIDEAVEIPVNSADG 67
Query: 245 KQ-------IGRIMMKGDNITLIQNVN 304
K+ +G+I++KGDNITLI + +
Sbjct: 68 KEDVEKGTPLGKILLKGDNITLITSAD 94
>UniRef50_Q9U7L5 Cluster: SmE protein; n=3; Trypanosomatidae|Rep:
SmE protein - Leptomonas collosoma
Length = 94
Score = 79.0 bits (186), Expect = 4e-14
Identities = 28/79 (35%), Positives = 58/79 (73%)
Frame = +2
Query: 65 KVMVQPINLIFRYLQNRSRVQIWLYENVNLRIEGHIVGFDEYMNIVLDEAEEVHMKTKNR 244
K+MV+P ++I +++ + RV +WL + +++IEG+++G+DE+MN+VL +A E + KTK
Sbjct: 14 KLMVKPSSVIHKFMTTQQRVCVWLVHDAHIKIEGNLLGYDEFMNVVLGDATETNSKTKES 73
Query: 245 KQIGRIMMKGDNITLIQNV 301
+G+I+++ DN+ ++ +
Sbjct: 74 THLGKILLRSDNVGVVHAI 92
>UniRef50_A2X0E3 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 141
Score = 71.3 bits (167), Expect = 7e-12
Identities = 30/51 (58%), Positives = 41/51 (80%)
Frame = +2
Query: 146 VNLRIEGHIVGFDEYMNIVLDEAEEVHMKTKNRKQIGRIMMKGDNITLIQN 298
V++ + H GFDEYMN+VLDEAEE+++K RK +GRI++KGDNITL+ N
Sbjct: 88 VSVTLHVHAKGFDEYMNLVLDEAEEINIKKDTRKSLGRILLKGDNITLMMN 138
Score = 66.1 bits (154), Expect = 3e-10
Identities = 30/50 (60%), Positives = 41/50 (82%)
Frame = +2
Query: 56 KVQKVMVQPINLIFRYLQNRSRVQIWLYENVNLRIEGHIVGFDEYMNIVL 205
KVQ++M QPINLIFR+LQ+++R+QIWL+E +LRIEG I+ Y+N VL
Sbjct: 5 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRII---MYVNSVL 51
>UniRef50_Q4Q7I2 Cluster: Small nuclear ribonucleoprotein
polypeptide e, putative; n=4; Trypanosomatidae|Rep:
Small nuclear ribonucleoprotein polypeptide e, putative
- Leishmania major
Length = 86
Score = 70.5 bits (165), Expect = 1e-11
Identities = 24/74 (32%), Positives = 51/74 (68%)
Frame = +2
Query: 71 MVQPINLIFRYLQNRSRVQIWLYENVNLRIEGHIVGFDEYMNIVLDEAEEVHMKTKNRKQ 250
M P ++ R++Q+ RV +WL + +R+EG+++G+DE+MN+VL + E +++ +
Sbjct: 8 MENPTGVVHRFMQDHQRVCVWLVHDPQIRLEGNLLGYDEFMNVVLGDTTETNLRNSKSYR 67
Query: 251 IGRIMMKGDNITLI 292
+G+I+++ DN+ +I
Sbjct: 68 LGKILLRSDNVGVI 81
>UniRef50_A2EQ40 Cluster: Sm protein; n=1; Trichomonas vaginalis
G3|Rep: Sm protein - Trichomonas vaginalis G3
Length = 93
Score = 64.5 bits (150), Expect = 8e-10
Identities = 26/80 (32%), Positives = 53/80 (66%)
Frame = +2
Query: 80 PINLIFRYLQNRSRVQIWLYENVNLRIEGHIVGFDEYMNIVLDEAEEVHMKTKNRKQIGR 259
P+ + YL+ R+R+++ L +N + +EG+++GFDEYMN+VL ++ EV+ K R +G
Sbjct: 15 PLKIYVSYLKERARLRVHLNDNSKMYMEGNLLGFDEYMNLVLGDSYEVYPKENTRVPLGT 74
Query: 260 IMMKGDNITLIQNVNPNASV 319
+++G+ + ++ + PN +
Sbjct: 75 SLLRGECVGMVHPI-PNIHI 93
>UniRef50_Q3LWL6 Cluster: MRNA splicing protein; n=1; Bigelowiella
natans|Rep: MRNA splicing protein - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 80
Score = 63.3 bits (147), Expect = 2e-09
Identities = 33/76 (43%), Positives = 51/76 (67%)
Frame = +2
Query: 59 VQKVMVQPINLIFRYLQNRSRVQIWLYENVNLRIEGHIVGFDEYMNIVLDEAEEVHMKTK 238
++K+MV PINL++RYL ++ + + L E N I G I+GFDEYMNIVL EA + + +
Sbjct: 1 MKKLMVHPINLLYRYLIGKNIILVCLKEK-NKTINGKIIGFDEYMNIVLSEAVAKNKEVE 59
Query: 239 NRKQIGRIMMKGDNIT 286
K + I++KG+ I+
Sbjct: 60 KIKNL--ILVKGNQIS 73
>UniRef50_Q9AVY1 Cluster: Putative small nuclear ribonucleoprotein
E; n=1; Guillardia theta|Rep: Putative small nuclear
ribonucleoprotein E - Guillardia theta (Cryptomonas phi)
Length = 78
Score = 58.0 bits (134), Expect = 7e-08
Identities = 25/78 (32%), Positives = 52/78 (66%)
Frame = +2
Query: 71 MVQPINLIFRYLQNRSRVQIWLYENVNLRIEGHIVGFDEYMNIVLDEAEEVHMKTKNRKQ 250
M+QPIN +F++L+ ++ V I + + +EG+++GFDE+MN+V++ E + +
Sbjct: 1 MIQPINQLFKFLKEKNLVTIIFKGSNDYILEGNLIGFDEFMNLVIENTTE-KKDSLIVRD 59
Query: 251 IGRIMMKGDNITLIQNVN 304
+G +++KGD+I I +++
Sbjct: 60 LGYVLIKGDSILTISSIH 77
>UniRef50_Q677D4 Cluster: Small nuclear ribonucleoprotein
polypeptide G; n=1; Hyacinthus orientalis|Rep: Small
nuclear ribonucleoprotein polypeptide G - Hyacinthus
orientalis (Common hyacinth)
Length = 96
Score = 47.6 bits (108), Expect = 1e-04
Identities = 24/72 (33%), Positives = 45/72 (62%)
Frame = +2
Query: 98 RYLQNRSRVQIWLYENVNLRIEGHIVGFDEYMNIVLDEAEEVHMKTKNRKQIGRIMMKGD 277
+ + S++QI L N N + G + GFD++MN+V+D EV+ KN IG ++++G+
Sbjct: 26 KQVHGTSKLQIKL--NANRVVVGTLRGFDQFMNLVIDNTMEVNGNDKN--DIGMVVIRGN 81
Query: 278 NITLIQNVNPNA 313
++ +I+ + P A
Sbjct: 82 SVVMIEALEPVA 93
>UniRef50_A7DR38 Cluster: Like-Sm ribonucleoprotein, core; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep: Like-Sm
ribonucleoprotein, core - Candidatus Nitrosopumilus
maritimus SCM1
Length = 78
Score = 47.2 bits (107), Expect = 1e-04
Identities = 19/48 (39%), Positives = 36/48 (75%)
Frame = +2
Query: 149 NLRIEGHIVGFDEYMNIVLDEAEEVHMKTKNRKQIGRIMMKGDNITLI 292
N I G+++GFD++MN++LD +EE+ + + K +G I+++GDN+ +I
Sbjct: 25 NKTIRGNLLGFDQHMNLLLDSSEEIPAEGE-AKGLGSIVVRGDNVVMI 71
>UniRef50_Q4N5C8 Cluster: Small nuclear ribonucleoprotein B,
putative; n=3; Eukaryota|Rep: Small nuclear
ribonucleoprotein B, putative - Theileria parva
Length = 155
Score = 44.8 bits (101), Expect = 7e-04
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 13/77 (16%)
Frame = +2
Query: 116 SRVQIWLYENV------NLRIEGHIVGFDEYMNIVLDEAEEVHM---KTKNRKQI----G 256
+R+Q WL NV N + G +V +D+YMN+VL + EE M K KNR ++ G
Sbjct: 6 TRMQHWLQYNVRVTLKDNRKFVGTLVAYDKYMNLVLSDCEEFRMTLGKDKNRTEVKRTLG 65
Query: 257 RIMMKGDNITLIQNVNP 307
++++G+NI +P
Sbjct: 66 FVLLRGENIVSFTAKSP 82
>UniRef50_UPI000049841B Cluster: small nuclear ribonucleoprotein G;
n=2; Entamoeba histolytica HM-1:IMSS|Rep: small nuclear
ribonucleoprotein G - Entamoeba histolytica HM-1:IMSS
Length = 81
Score = 44.0 bits (99), Expect = 0.001
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Frame = +2
Query: 71 MVQPINLIFRYLQNRSRVQIWLYENVNLRIEGHIVGFDEYMNIVLDEAEEV-HMKTKNRK 247
M +P + YL+ R V+I + I G + G+DEYMN+VLDEA + + T
Sbjct: 1 MEKPKPELKHYLEKRILVKI----HGKRSIIGVLSGYDEYMNLVLDEAYDASNPDTDKHI 56
Query: 248 QIGRIMMKGDNITLIQNVNP 307
IG IM+ G++I ++ ++P
Sbjct: 57 PIGMIMILGNSILSVETIDP 76
>UniRef50_Q979R0 Cluster: Small nuclear ribonucleoprotein; n=4;
Thermoplasmatales|Rep: Small nuclear ribonucleoprotein -
Thermoplasma volcanium
Length = 71
Score = 43.6 bits (98), Expect = 0.002
Identities = 25/74 (33%), Positives = 46/74 (62%)
Frame = +2
Query: 71 MVQPINLIFRYLQNRSRVQIWLYENVNLRIEGHIVGFDEYMNIVLDEAEEVHMKTKNRKQ 250
M+ P+ L+ + R V + L +N L EG + G+D+YMN+VLD+ +E + + +RK
Sbjct: 1 MIMPMKLLEESVNKR--VSLLLKDNRVL--EGTLTGYDDYMNMVLDDVDE-NSENVSRK- 54
Query: 251 IGRIMMKGDNITLI 292
+G ++++G N+ I
Sbjct: 55 LGTVVIRGSNVVRI 68
>UniRef50_Q74ZR8 Cluster: AGR130Wp; n=2; Saccharomycetales|Rep:
AGR130Wp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 80
Score = 42.7 bits (96), Expect = 0.003
Identities = 21/74 (28%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Frame = +2
Query: 74 VQPINLIFRYLQNRSRVQIWLYENVNLRIEGHIVGFDEYMNIVLDEAEEVHMKTKN-RKQ 250
V P+ +I R + IW+ N G +VGFD+++N+V+++ E + ++
Sbjct: 3 VLPLEIIDRAINQ----PIWVLLTSNREFTGTLVGFDDFVNVVIEDVVEYDAPDRAVKRH 58
Query: 251 IGRIMMKGDNITLI 292
GR+++ G+NIT++
Sbjct: 59 PGRMLLSGNNITVL 72
>UniRef50_Q8IL38 Cluster: Small nuclear ribonuclear protein,
putative; n=3; Plasmodium|Rep: Small nuclear ribonuclear
protein, putative - Plasmodium falciparum (isolate 3D7)
Length = 101
Score = 42.3 bits (95), Expect = 0.004
Identities = 20/58 (34%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Frame = +2
Query: 125 QIWLYENVNLRIEGHIVGFDEYMNIVLDEAEEVHMKTKNRK--QIGRIMMKGDNITLI 292
+IW+ + I G +VGFDEY+N+VL++ E +K +I ++++ G NIT++
Sbjct: 23 KIWIMMKGDKEIVGKLVGFDEYVNMVLEDVTEYTYANNVKKVNKIKKLLLNGLNITIM 80
>UniRef50_Q8SSF1 Cluster: SMALL NUCLEAR RIBONUCLEOPROTEIN E; n=1;
Encephalitozoon cuniculi|Rep: SMALL NUCLEAR
RIBONUCLEOPROTEIN E - Encephalitozoon cuniculi
Length = 111
Score = 42.3 bits (95), Expect = 0.004
Identities = 19/45 (42%), Positives = 30/45 (66%)
Frame = +2
Query: 74 VQPINLIFRYLQNRSRVQIWLYENVNLRIEGHIVGFDEYMNIVLD 208
V P+ I+ +L V+IW +++ + +G IVGFDEYMN+V+D
Sbjct: 46 VLPLEKIYDFLSRSIDVEIW-EKDMGAKHKGRIVGFDEYMNVVVD 89
>UniRef50_Q8TYS2 Cluster: Small nuclear ribonucleoprotein (SnRNP)
homolog; n=1; Methanopyrus kandleri|Rep: Small nuclear
ribonucleoprotein (SnRNP) homolog - Methanopyrus
kandleri
Length = 73
Score = 42.3 bits (95), Expect = 0.004
Identities = 17/45 (37%), Positives = 33/45 (73%)
Frame = +2
Query: 158 IEGHIVGFDEYMNIVLDEAEEVHMKTKNRKQIGRIMMKGDNITLI 292
+ G +V FD ++N+VLD+ E+ ++ R +GR++++GD++TLI
Sbjct: 25 LRGRLVSFDGHLNLVLDDCVEIDEDSEVR--LGRVLIRGDSVTLI 67
>UniRef50_A2DQD7 Cluster: Sm protein; n=1; Trichomonas vaginalis
G3|Rep: Sm protein - Trichomonas vaginalis G3
Length = 107
Score = 41.5 bits (93), Expect = 0.007
Identities = 18/52 (34%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
Frame = +2
Query: 152 LRIEGHIVGFDEYMNIVLDEAEEVHMKTKNR--KQIGRIMMKGDNITLIQNV 301
L +G ++ +DE+MN+VL + EE+ + R K+IG ++M+G N++ ++ V
Sbjct: 24 LSFQGILMNYDEHMNLVLRQVEEIPQDNQQREPKRIGLMVMRGCNVSTVEAV 75
>UniRef50_A2R8P2 Cluster: Function: snRPG of H. sapiens is
associated with small nuclear ribonucleoproteins; n=1;
Aspergillus niger|Rep: Function: snRPG of H. sapiens is
associated with small nuclear ribonucleoproteins -
Aspergillus niger
Length = 105
Score = 41.5 bits (93), Expect = 0.007
Identities = 24/81 (29%), Positives = 48/81 (59%)
Frame = +2
Query: 53 PKVQKVMVQPINLIFRYLQNRSRVQIWLYENVNLRIEGHIVGFDEYMNIVLDEAEEVHMK 232
P+++K I + +Y++ R Q+ N N ++ G + G+D +MNIVLDEA E +
Sbjct: 6 PELKKSTEANIAVFQQYMEKRVFCQL----NGNRKVIGILRGYDVFMNIVLDEAFE-EKQ 60
Query: 233 TKNRKQIGRIMMKGDNITLIQ 295
+ IG I+++G+++ +++
Sbjct: 61 GGEKVAIGMIVIRGNSVVMLE 81
>UniRef50_A7DRH4 Cluster: Like-Sm ribonucleoprotein, core; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep: Like-Sm
ribonucleoprotein, core - Candidatus Nitrosopumilus
maritimus SCM1
Length = 80
Score = 41.1 bits (92), Expect = 0.009
Identities = 23/76 (30%), Positives = 43/76 (56%)
Frame = +2
Query: 65 KVMVQPINLIFRYLQNRSRVQIWLYENVNLRIEGHIVGFDEYMNIVLDEAEEVHMKTKNR 244
K+M I+ + ++ +V + N N ++G + FD +MN+ L+ AE+V + N
Sbjct: 2 KIMADEISTLMT--NSKDKVVLLRLRN-NKTVQGTLKDFDIHMNLTLENAEDVSEEKPN- 57
Query: 245 KQIGRIMMKGDNITLI 292
IG+++++GDNI I
Sbjct: 58 -PIGKVLLRGDNILAI 72
>UniRef50_UPI00015B4C2B Cluster: PREDICTED: similar to
ENSANGP00000018479; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000018479 - Nasonia
vitripennis
Length = 225
Score = 40.7 bits (91), Expect = 0.012
Identities = 16/58 (27%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Frame = +2
Query: 80 PINLIFRYLQNRSRVQIWLYENVNLR--IEGHIVGFDEYMNIVLDEAEEVHMKTKNRK 247
P+ ++F+Y++NR RV+++ +R +E ++ FD + N+ L++ E+ + RK
Sbjct: 115 PLGVLFQYMENRIRVKVYTRNANGIRGHVEAYVAAFDRHWNLALEDCLELWTRKVKRK 172
>UniRef50_Q2FT45 Cluster: Like-Sm ribonucleoprotein, core; n=3;
Methanomicrobiales|Rep: Like-Sm ribonucleoprotein, core
- Methanospirillum hungatei (strain JF-1 / DSM 864)
Length = 80
Score = 40.7 bits (91), Expect = 0.012
Identities = 27/77 (35%), Positives = 47/77 (61%)
Frame = +2
Query: 77 QPINLIFRYLQNRSRVQIWLYENVNLRIEGHIVGFDEYMNIVLDEAEEVHMKTKNRKQIG 256
+P++++ + L NR V I L I+G + G+D +MN+VLD+AEE+ + IG
Sbjct: 9 RPMDILDQVL-NRQPVLISL--KGGREIKGVLQGYDVHMNLVLDKAEEI--VQGQAQSIG 63
Query: 257 RIMMKGDNITLIQNVNP 307
++++GDN+ I + NP
Sbjct: 64 TLIIRGDNVIYI-SPNP 79
>UniRef50_Q0UX37 Cluster: Predicted protein; n=1; Phaeosphaeria
nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 80
Score = 40.3 bits (90), Expect = 0.016
Identities = 17/53 (32%), Positives = 30/53 (56%)
Frame = +2
Query: 125 QIWLYENVNLRIEGHIVGFDEYMNIVLDEAEEVHMKTKNRKQIGRIMMKGDNI 283
QIW+ N G +VGFD+Y+N+VL+E E+ + + ++ R + N+
Sbjct: 28 QIWVIMNGGKEFTGKLVGFDDYVNMVLEEVTEIWYQAETDRRFWRTSKETANM 80
>UniRef50_O29885 Cluster: SnRNP, putative; n=1; Archaeoglobus
fulgidus|Rep: SnRNP, putative - Archaeoglobus fulgidus
Length = 75
Score = 39.9 bits (89), Expect = 0.021
Identities = 25/75 (33%), Positives = 42/75 (56%)
Frame = +2
Query: 71 MVQPINLIFRYLQNRSRVQIWLYENVNLRIEGHIVGFDEYMNIVLDEAEEVHMKTKNRKQ 250
MV P ++ + RV++ EN ++ G + G D+YMN+ L A E + K R
Sbjct: 1 MVLPNQMVKSMVGKIIRVEMKGEEN---QLVGKLEGVDDYMNLYLTNAMECKGEEKVR-S 56
Query: 251 IGRIMMKGDNITLIQ 295
+G I+++G+N+ LIQ
Sbjct: 57 LGEIVLRGNNVVLIQ 71
>UniRef50_Q9N4G9 Cluster: Probable small nuclear ribonucleoprotein
G; n=16; Bilateria|Rep: Probable small nuclear
ribonucleoprotein G - Caenorhabditis elegans
Length = 77
Score = 39.9 bits (89), Expect = 0.021
Identities = 17/51 (33%), Positives = 33/51 (64%)
Frame = +2
Query: 143 NVNLRIEGHIVGFDEYMNIVLDEAEEVHMKTKNRKQIGRIMMKGDNITLIQ 295
N N R+ G + GFD +MN+V+DEA E + K +G +++G+++ +++
Sbjct: 22 NGNRRVSGILRGFDPFMNMVIDEAVE-YQKDGGSVNLGMTVIRGNSVVIME 71
>UniRef50_A3FQF0 Cluster: Putative uncharacterized protein; n=2;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium parvum Iowa II
Length = 67
Score = 39.5 bits (88), Expect = 0.027
Identities = 18/47 (38%), Positives = 32/47 (68%)
Frame = +2
Query: 152 LRIEGHIVGFDEYMNIVLDEAEEVHMKTKNRKQIGRIMMKGDNITLI 292
+R +G +V FDEYMNI+L++ EE TK + +G++ ++ +N+ I
Sbjct: 1 MRYKGTLVSFDEYMNILLNDCEEWIDNTK-KGTLGKVFIRCNNVLYI 46
>UniRef50_P57670 Cluster: Putative snRNP Sm-like protein; n=4;
Thermoplasmatales|Rep: Putative snRNP Sm-like protein -
Thermoplasma acidophilum
Length = 83
Score = 39.5 bits (88), Expect = 0.027
Identities = 17/48 (35%), Positives = 29/48 (60%)
Frame = +2
Query: 149 NLRIEGHIVGFDEYMNIVLDEAEEVHMKTKNRKQIGRIMMKGDNITLI 292
N G + G+D YMNIVL A E+ + +N+ R++++GDN+ +
Sbjct: 29 NREYSGILEGYDVYMNIVLQNASEI-INGENKGVYDRVLVRGDNVIFV 75
>UniRef50_Q9VXE0 Cluster: Probable small nuclear ribonucleoprotein
G; n=14; Eukaryota|Rep: Probable small nuclear
ribonucleoprotein G - Drosophila melanogaster (Fruit
fly)
Length = 76
Score = 39.1 bits (87), Expect = 0.036
Identities = 18/66 (27%), Positives = 38/66 (57%)
Frame = +2
Query: 98 RYLQNRSRVQIWLYENVNLRIEGHIVGFDEYMNIVLDEAEEVHMKTKNRKQIGRIMMKGD 277
+Y+ R +++ N + G + GFD +MN+VLD+ E K + IG ++++G+
Sbjct: 11 KYMDKRMMLKL----NGGRAVTGILRGFDPFMNVVLDDTVE-ECKDNTKNNIGMVVIRGN 65
Query: 278 NITLIQ 295
+I +++
Sbjct: 66 SIVMVE 71
>UniRef50_Q0WMZ9 Cluster: Sm-like protein; n=19; Eukaryota|Rep:
Sm-like protein - Arabidopsis thaliana (Mouse-ear cress)
Length = 88
Score = 38.7 bits (86), Expect = 0.048
Identities = 16/58 (27%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Frame = +2
Query: 125 QIWLYENVNLRIEGHIVGFDEYMNIVLDEAEEVHMKTKNRK--QIGRIMMKGDNITLI 292
+IW+ + + G + GFD Y+N+VL++ E + + R+ ++ +I++ G+NI ++
Sbjct: 21 KIWVIMKGDKELVGILKGFDVYVNMVLEDVTEYEITAEGRRVTKLDQILLNGNNIAIL 78
>UniRef50_Q54RX0 Cluster: LSM (Like-Sm) domain-containing protein;
n=1; Dictyostelium discoideum AX4|Rep: LSM (Like-Sm)
domain-containing protein - Dictyostelium discoideum AX4
Length = 85
Score = 38.7 bits (86), Expect = 0.048
Identities = 20/59 (33%), Positives = 36/59 (61%)
Frame = +2
Query: 143 NVNLRIEGHIVGFDEYMNIVLDEAEEVHMKTKNRKQIGRIMMKGDNITLIQNVNPNASV 319
N N + G + GFD +MNI L + EV T+ + +IG ++++G++I L++ + A V
Sbjct: 24 NGNRTVHGILRGFDTFMNIALKDTVEVVSPTE-KYEIGMVIIRGNSILLMEPLESMAYV 81
>UniRef50_Q8TQX4 Cluster: Sm protein; n=8; Archaea|Rep: Sm protein -
Methanosarcina acetivorans
Length = 74
Score = 38.7 bits (86), Expect = 0.048
Identities = 19/62 (30%), Positives = 41/62 (66%)
Frame = +2
Query: 116 SRVQIWLYENVNLRIEGHIVGFDEYMNIVLDEAEEVHMKTKNRKQIGRIMMKGDNITLIQ 295
SR+++ + ++NL +EG + D+YMN+ L + E+ ++ + + +G ++++G+NI LI
Sbjct: 13 SRIRVEMKGDLNL-LEGTLKSVDDYMNLHLVDTMEI-VRGEKVRSLGSVVLRGNNIILIT 70
Query: 296 NV 301
V
Sbjct: 71 PV 72
>UniRef50_Q05E36 Cluster: Putative small nucleolar RNP protein Sm;
n=1; Aeropyrum pernix|Rep: Putative small nucleolar RNP
protein Sm - Aeropyrum pernix
Length = 94
Score = 38.7 bits (86), Expect = 0.048
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +2
Query: 95 FRYLQNRSRVQIWLYENVNLRIEGHIVGFDEYMNIVLDEAEEV-HMKTKNRKQIGRIMMK 271
F+YL+ QI++ G +V D MN++LD+A EV T+ +IGR+++K
Sbjct: 13 FKYLKEHLNSQIYVKLKDGSEYVGKLVATDTTMNLILDDAIEVADNGTRLVAKIGRVLIK 72
Query: 272 GDNITLI 292
G + I
Sbjct: 73 GSMVEFI 79
>UniRef50_A6R7U2 Cluster: Predicted protein; n=2;
Eurotiomycetidae|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 104
Score = 38.3 bits (85), Expect = 0.063
Identities = 15/48 (31%), Positives = 32/48 (66%)
Frame = +2
Query: 149 NLRIEGHIVGFDEYMNIVLDEAEEVHMKTKNRKQIGRIMMKGDNITLI 292
N G ++GFD+Y+N+VL++ E T ++ ++ +I++ G+NI ++
Sbjct: 46 NSEFSGTLLGFDDYVNMVLEDVTEFDY-TGSQTKLSKILLNGNNICML 92
>UniRef50_Q8IB57 Cluster: Small nuclear ribonucleoprotein, putative;
n=8; Eukaryota|Rep: Small nuclear ribonucleoprotein,
putative - Plasmodium falciparum (isolate 3D7)
Length = 83
Score = 37.9 bits (84), Expect = 0.083
Identities = 20/56 (35%), Positives = 37/56 (66%)
Frame = +2
Query: 119 RVQIWLYENVNLRIEGHIVGFDEYMNIVLDEAEEVHMKTKNRKQIGRIMMKGDNIT 286
R+QI+L N N ++ G + G+D +MN+VLD E+ K + IG ++++G++I+
Sbjct: 21 RLQIYL--NGNRQVVGILRGYDTFMNLVLDNTMEI--KKDEQIDIGVVVIRGNSIS 72
>UniRef50_Q54HH8 Cluster: Putative small nuclear
ribonucleoparticle-associated protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative small nuclear
ribonucleoparticle-associated protein - Dictyostelium
discoideum AX4
Length = 257
Score = 37.9 bits (84), Expect = 0.083
Identities = 16/49 (32%), Positives = 34/49 (69%), Gaps = 2/49 (4%)
Frame = +2
Query: 80 PINLIFRYLQNRSRVQIWLYENVNLR--IEGHIVGFDEYMNIVLDEAEE 220
P++L+ R L+++S++++ + +R G+I+ FD++MNI+L + EE
Sbjct: 166 PLSLLKRALESKSKIKVMIRGTNCIRGYCRGYIIAFDKHMNIILRDVEE 214
>UniRef50_Q2URY1 Cluster: Predicted protein; n=1; Aspergillus
oryzae|Rep: Predicted protein - Aspergillus oryzae
Length = 122
Score = 37.9 bits (84), Expect = 0.083
Identities = 17/51 (33%), Positives = 34/51 (66%)
Frame = +2
Query: 143 NVNLRIEGHIVGFDEYMNIVLDEAEEVHMKTKNRKQIGRIMMKGDNITLIQ 295
N N ++ G + G+D +MNIVLDEA E + + IG ++++G+++ +++
Sbjct: 10 NGNRKVIGILRGYDVFMNIVLDEAFE-EKQGGEKVAIGMVVIRGNSVVMLE 59
>UniRef50_P40089 Cluster: U6 snRNA-associated Sm-like protein LSm5;
n=5; Saccharomycetales|Rep: U6 snRNA-associated Sm-like
protein LSm5 - Saccharomyces cerevisiae (Baker's yeast)
Length = 93
Score = 37.9 bits (84), Expect = 0.083
Identities = 18/55 (32%), Positives = 36/55 (65%), Gaps = 7/55 (12%)
Frame = +2
Query: 149 NLRIEGHIVGFDEYMNIVLDEAEE----VHMKTKNRKQI---GRIMMKGDNITLI 292
N EG +VGFD+++N++L++A E +++N K + GR+++ G+NI ++
Sbjct: 27 NREFEGTLVGFDDFVNVILEDAVEWLIDPEDESRNEKVMQHHGRMLLSGNNIAIL 81
>UniRef50_Q9L9N8 Cluster: ORF06; n=9; Borrelia burgdorferi
group|Rep: ORF06 - Borrelia burgdorferi (Lyme disease
spirochete)
Length = 184
Score = 37.5 bits (83), Expect = 0.11
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Frame = +2
Query: 122 VQIWLYENVNLRIEGHIVGFDEYMN---IVLDEAEEVHMKTKNRKQIGRIMMKGDNITLI 292
V+ W+Y N+ + G + F + + E E++ + TKN IG + KGDN+ L+
Sbjct: 24 VKNWIYSNIFIIKIGTVKEFKHQTQEAIVTIPEFEDLEIHTKNISNIGLELSKGDNVLLL 83
Query: 293 QN 298
Q+
Sbjct: 84 QS 85
>UniRef50_Q8IJN2 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 928
Score = 37.1 bits (82), Expect = 0.15
Identities = 20/76 (26%), Positives = 40/76 (52%)
Frame = -1
Query: 283 YIVSLHHYSTDLFPVLSFHMNFFSFIQNNVHVFVKSHDVPLDSQIHVLVKPNLYTASIL* 104
YI+ + S + F L+ N S+ +N + ++D+P D + + +K Y IL
Sbjct: 115 YIIWNYVNSKEKFKYLNMQQNIKSYCENLAY----NYDIPKDIERNEWLKAYYYMTDILL 170
Query: 103 ISEDKIDGLYHHLLNF 56
I+E+K ++HL+++
Sbjct: 171 INENKFHNYFYHLISY 186
>UniRef50_Q6BK43 Cluster: Similar to sp|P40089 Saccharomyces
cerevisiae YER146w LSM5 Sm-like; n=1; Debaryomyces
hansenii|Rep: Similar to sp|P40089 Saccharomyces
cerevisiae YER146w LSM5 Sm-like - Debaryomyces hansenii
(Yeast) (Torulaspora hansenii)
Length = 93
Score = 37.1 bits (82), Expect = 0.15
Identities = 13/44 (29%), Positives = 28/44 (63%)
Frame = +2
Query: 161 EGHIVGFDEYMNIVLDEAEEVHMKTKNRKQIGRIMMKGDNITLI 292
+G ++GFD+Y+N+VL+ EE + K I ++++ G + ++
Sbjct: 46 KGTLIGFDDYVNMVLENVEEFDNEGPKGKVIKKMLLNGSQVAML 89
>UniRef50_A0RYZ2 Cluster: Small nuclear ribonucleoprotein; n=2;
Thermoprotei|Rep: Small nuclear ribonucleoprotein -
Cenarchaeum symbiosum
Length = 106
Score = 37.1 bits (82), Expect = 0.15
Identities = 16/48 (33%), Positives = 30/48 (62%)
Frame = +2
Query: 161 EGHIVGFDEYMNIVLDEAEEVHMKTKNRKQIGRIMMKGDNITLIQNVN 304
+G + D YMN+++ +AEE H +K GR++++G+N+ I+ N
Sbjct: 58 KGKMENVDSYMNLIMTDAEEFH-DSKVVANYGRVIVRGNNVLFIRLEN 104
>UniRef50_Q9YEQ5 Cluster: Putative snRNP Sm-like protein; n=1;
Aeropyrum pernix|Rep: Putative snRNP Sm-like protein -
Aeropyrum pernix
Length = 77
Score = 37.1 bits (82), Expect = 0.15
Identities = 17/47 (36%), Positives = 35/47 (74%)
Frame = +2
Query: 152 LRIEGHIVGFDEYMNIVLDEAEEVHMKTKNRKQIGRIMMKGDNITLI 292
LRI+G + +D+++NI+L +AEE+ +T R+ +G +++GD++ +I
Sbjct: 29 LRIKGVLKTYDQHLNIILGDAEEIG-ETSIRR-LGLTLVRGDSVVVI 73
>UniRef50_P62308 Cluster: Small nuclear ribonucleoprotein G; n=46;
Eukaryota|Rep: Small nuclear ribonucleoprotein G - Homo
sapiens (Human)
Length = 76
Score = 37.1 bits (82), Expect = 0.15
Identities = 15/51 (29%), Positives = 33/51 (64%)
Frame = +2
Query: 143 NVNLRIEGHIVGFDEYMNIVLDEAEEVHMKTKNRKQIGRIMMKGDNITLIQ 295
N ++G + GFD +MN+V+DE E+ + + IG ++++G++I +++
Sbjct: 22 NGGRHVQGILRGFDPFMNLVIDECVEM-ATSGQQNNIGMVVIRGNSIIMLE 71
>UniRef50_Q5K900 Cluster: U6 snRNA binding protein, putative; n=1;
Filobasidiella neoformans|Rep: U6 snRNA binding protein,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 131
Score = 36.7 bits (81), Expect = 0.19
Identities = 13/43 (30%), Positives = 28/43 (65%)
Frame = +2
Query: 164 GHIVGFDEYMNIVLDEAEEVHMKTKNRKQIGRIMMKGDNITLI 292
G + G+D+ MN+V+D+ E + + + +G ++++G NI L+
Sbjct: 49 GILKGYDQLMNLVMDDVVEEYEDGRPTRSLGLVVLRGPNIVLV 91
>UniRef50_O26745 Cluster: Putative snRNP Sm-like protein; n=4;
Euryarchaeota|Rep: Putative snRNP Sm-like protein -
Methanobacterium thermoautotrophicum
Length = 81
Score = 36.7 bits (81), Expect = 0.19
Identities = 17/43 (39%), Positives = 29/43 (67%)
Frame = +2
Query: 164 GHIVGFDEYMNIVLDEAEEVHMKTKNRKQIGRIMMKGDNITLI 292
G + FD +MN+VL++AEE+ R+ +G ++++GDNI I
Sbjct: 38 GVLKSFDLHMNLVLNDAEELEDGEVTRR-LGTVLIRGDNIVYI 79
>UniRef50_Q00XA2 Cluster: Putative small nuclear ribonucleoprotein
E; n=1; Ostreococcus tauri|Rep: Putative small nuclear
ribonucleoprotein E - Ostreococcus tauri
Length = 101
Score = 35.9 bits (79), Expect = 0.34
Identities = 16/66 (24%), Positives = 41/66 (62%)
Frame = +2
Query: 98 RYLQNRSRVQIWLYENVNLRIEGHIVGFDEYMNIVLDEAEEVHMKTKNRKQIGRIMMKGD 277
RY+ + R+++ N N + G + GFD+++N+VLD++ + T + +G ++++G+
Sbjct: 29 RYMDKKLRLRL----NGNRSVTGILRGFDQFLNLVLDDS--TNDTTTEKTPMGMVVVRGN 82
Query: 278 NITLIQ 295
++ ++
Sbjct: 83 SVVSME 88
>UniRef50_Q4YVP4 Cluster: Ribonucleoprotein, putative; n=3;
Plasmodium (Vinckeia)|Rep: Ribonucleoprotein, putative -
Plasmodium berghei
Length = 194
Score = 35.9 bits (79), Expect = 0.34
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 13/68 (19%)
Frame = +2
Query: 119 RVQIWLYENVNLRIE------GHIVGFDEYMNIVLDEAEE---VHMKTKNRKQI----GR 259
R++ WL V + I G + +D +MNIVL +AEE V K N K+I G
Sbjct: 6 RLESWLQYRVRVTISDTRYYVGTFLSYDRHMNIVLVDAEEFRRVKNKENNFKEIKRVVGL 65
Query: 260 IMMKGDNI 283
I+++GDNI
Sbjct: 66 ILIRGDNI 73
>UniRef50_Q4UHZ4 Cluster: (U6) snRNA-associated Sm-like protein,
putative; n=3; Piroplasmida|Rep: (U6) snRNA-associated
Sm-like protein, putative - Theileria annulata
Length = 90
Score = 35.5 bits (78), Expect = 0.44
Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +2
Query: 125 QIWLYENVNLRIEGHIVGFDEYMNIVLDEAEEVHMKTKNRK--QIGRIMMKGDNITLI 292
+IW+ + I G + GFD+YMN+VL++ + K ++ ++ G+N+ ++
Sbjct: 23 KIWIIMKNDKEITGTLRGFDDYMNMVLEDVVDYSFSADGVKTTELNDALVNGNNVAML 80
>UniRef50_A7ANM8 Cluster: Sm domain containing protein; n=1; Babesia
bovis|Rep: Sm domain containing protein - Babesia bovis
Length = 159
Score = 35.5 bits (78), Expect = 0.44
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 15/82 (18%)
Frame = +2
Query: 116 SRVQIWLYENVNLRIE------GHIVGFDEYMNIVLDEAEEVHM---------KTKNRKQ 250
+R+Q WL V + I+ G + FD++MN+VL + EE + K + ++
Sbjct: 6 TRMQQWLQYRVRVAIKDGRKFVGTFIAFDKHMNLVLADCEEFRITKGKGPDKQKVELKRT 65
Query: 251 IGRIMMKGDNITLIQNVNPNAS 316
+G IM++G+NI P A+
Sbjct: 66 LGFIMLRGENIVSFTAEAPPAA 87
>UniRef50_Q6CGF6 Cluster: Similar to tr|Q8IGS9 Drosophila
melanogaster RE35747p; n=1; Yarrowia lipolytica|Rep:
Similar to tr|Q8IGS9 Drosophila melanogaster RE35747p -
Yarrowia lipolytica (Candida lipolytica)
Length = 131
Score = 35.5 bits (78), Expect = 0.44
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +2
Query: 158 IEGHIVGFDEYMNIVLDEAEEVHMKTKNRKQIGRIMMKGDNITLIQ 295
+ GH++ D +MN+ L E EE +N + ++G NI +Q
Sbjct: 27 LRGHLLKCDHWMNLTLKEVEEFSASGENTATVSEYYVRGSNIKALQ 72
>UniRef50_Q4PED8 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 134
Score = 35.5 bits (78), Expect = 0.44
Identities = 17/54 (31%), Positives = 36/54 (66%), Gaps = 7/54 (12%)
Frame = +2
Query: 155 RIEGHIVGFDEYMNIVLDEA-EEVHMKTKNRK------QIGRIMMKGDNITLIQ 295
+I+G + GFD ++N+V+DEA E+VH + N + G ++++G+++T ++
Sbjct: 73 KIQGTLRGFDMFLNLVVDEAIEQVHPEAGNPNVWQDGDRCGTVVVRGNSVTSLE 126
>UniRef50_O95777 Cluster: U6 snRNA-associated Sm-like protein LSm8;
n=23; Eukaryota|Rep: U6 snRNA-associated Sm-like protein
LSm8 - Homo sapiens (Human)
Length = 96
Score = 35.5 bits (78), Expect = 0.44
Identities = 17/52 (32%), Positives = 34/52 (65%), Gaps = 3/52 (5%)
Frame = +2
Query: 158 IEGHIVGFDEYMNIVLDEA-EEVHMKTKNRKQI--GRIMMKGDNITLIQNVN 304
I G + GFD+ +N++LDE+ E V ++ +Q+ G +++GDN+ +I ++
Sbjct: 23 IVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEID 74
>UniRef50_A5K5F8 Cluster: U6 snRNA-associated Sm-like protein LSm8,
putative; n=2; Plasmodium|Rep: U6 snRNA-associated
Sm-like protein LSm8, putative - Plasmodium vivax
Length = 95
Score = 35.1 bits (77), Expect = 0.59
Identities = 19/69 (27%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Frame = +2
Query: 101 YLQNRSRVQIWLYENVNLRIEGHIVGFDEYMNIVLDEA-EEVHMKTKNRKQIGRIMMKGD 277
YL+N +I + N + G + GFD+ NI+L E ++ ++ + +G +++GD
Sbjct: 9 YLEN----EILVITNDSRIFTGKLKGFDQTTNIILGNCYERIYKESLEKISLGLYIIRGD 64
Query: 278 NITLIQNVN 304
+TLI ++
Sbjct: 65 TVTLIGEID 73
>UniRef50_Q247T3 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1357
Score = 34.7 bits (76), Expect = 0.78
Identities = 17/60 (28%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Frame = +2
Query: 122 VQIWLYENVNLR-IEGHIVGFDEYMNIVLDEAEEVHMKTKNRKQIGRIMMKGDNITLIQN 298
+Q++ ENV L+ IE ++G D +N+ +D + + ++K + +I + +KGD ++ Q+
Sbjct: 461 IQVFQDENVQLQPIEDQVIGSDLQLNVSIDPSSQQYIKNASFIKIVNLPIKGDINSISQS 520
>UniRef50_O42978 Cluster: U6 snRNP-associated protein Lsm5; n=4;
Eukaryota|Rep: U6 snRNP-associated protein Lsm5 -
Schizosaccharomyces pombe (Fission yeast)
Length = 80
Score = 34.7 bits (76), Expect = 0.78
Identities = 14/55 (25%), Positives = 29/55 (52%)
Frame = +2
Query: 128 IWLYENVNLRIEGHIVGFDEYMNIVLDEAEEVHMKTKNRKQIGRIMMKGDNITLI 292
+W+ G +VGFD+Y+NIVL + E T ++ +++ G+ + ++
Sbjct: 19 LWVIMKSEREFAGTLVGFDDYVNIVLKDVTEYDTVTGVTEKHSEMLLNGNGMCML 73
>UniRef50_O74966 Cluster: Probable small nuclear ribonucleoprotein
G; n=7; Ascomycota|Rep: Probable small nuclear
ribonucleoprotein G - Schizosaccharomyces pombe (Fission
yeast)
Length = 77
Score = 34.7 bits (76), Expect = 0.78
Identities = 15/60 (25%), Positives = 40/60 (66%)
Frame = +2
Query: 125 QIWLYENVNLRIEGHIVGFDEYMNIVLDEAEEVHMKTKNRKQIGRIMMKGDNITLIQNVN 304
Q+++ N + ++ G + G+D ++NIVL+++ E + + K IG + ++G+++ +I+ ++
Sbjct: 16 QVFVQLNGSRKVYGVLRGYDIFLNIVLEDSIEEKVDGEKVK-IGSVAIRGNSVIMIETLD 74
>UniRef50_Q9W087 Cluster: CG2021-PA; n=14; Eukaryota|Rep: CG2021-PA
- Drosophila melanogaster (Fruit fly)
Length = 95
Score = 34.3 bits (75), Expect = 1.0
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
Frame = +2
Query: 164 GHIVGFDEYMNIVLDEA-EEVHMKTKNRKQI--GRIMMKGDNITLI 292
G + GFD+ +NI++DE E V T +QI G +++GDNI +I
Sbjct: 24 GTLKGFDQTINIIIDECHERVFSTTSGIEQIVLGLHIIRGDNIAVI 69
>UniRef50_Q5CME6 Cluster: Similar to small nuclear
ribonucleoprotein; n=2; Cryptosporidium|Rep: Similar to
small nuclear ribonucleoprotein - Cryptosporidium
hominis
Length = 139
Score = 34.3 bits (75), Expect = 1.0
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 7/55 (12%)
Frame = +2
Query: 164 GHIVGFDEYMNIVLDEAEEVHMKTKN------RKQIGRIMMKGDNI-TLIQNVNP 307
G+++ FD +MN+VL + +E K ++ +G IM++G+NI T + P
Sbjct: 21 GNLMAFDRHMNLVLSDCQEYRRVKKGEEPKELKRSLGLIMLRGENIVTFVAEAPP 75
>UniRef50_O29386 Cluster: Putative snRNP Sm-like protein; n=10;
Archaea|Rep: Putative snRNP Sm-like protein -
Archaeoglobus fulgidus
Length = 77
Score = 34.3 bits (75), Expect = 1.0
Identities = 15/43 (34%), Positives = 28/43 (65%)
Frame = +2
Query: 164 GHIVGFDEYMNIVLDEAEEVHMKTKNRKQIGRIMMKGDNITLI 292
G + G+D +MN+VL +AEE+ RK +G ++++GD + +
Sbjct: 29 GTLDGYDIHMNLVLLDAEEIQNGEVVRK-VGSVVIRGDTVVFV 70
>UniRef50_Q54F84 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 137
Score = 33.9 bits (74), Expect = 1.4
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +2
Query: 125 QIWLYENVNLRIEGHIVGFDEYMNIVLDEAEEVHMKTKNRK--QIGRIMMKGDNITLIQ 295
QI + N I G I D Y+NI L +A+ + + KN++ + I+++ NI IQ
Sbjct: 42 QITIQLRSNCEIYGTITNVDAYLNIELSDAKLTNTRYKNKRDEHVQEILIQSRNIRFIQ 100
>UniRef50_Q4Q9J1 Cluster: Lsm7p protein, putative; n=6;
Trypanosomatidae|Rep: Lsm7p protein, putative -
Leishmania major
Length = 91
Score = 33.9 bits (74), Expect = 1.4
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = +2
Query: 158 IEGHIVGFDEYMNIVLDEAEEVHMKTKNRKQIGRIMMKGDNITLI 292
+ G + GFD +N+VL +AE H T RK IG +++G + LI
Sbjct: 35 VHGVLKGFDNNVNLVLADAELWHRDTHVRK-IGACVVRGGPVNLI 78
>UniRef50_A0CCJ3 Cluster: Chromosome undetermined scaffold_167,
whole genome shotgun sequence; n=3;
Oligohymenophorea|Rep: Chromosome undetermined
scaffold_167, whole genome shotgun sequence - Paramecium
tetraurelia
Length = 138
Score = 33.9 bits (74), Expect = 1.4
Identities = 14/46 (30%), Positives = 29/46 (63%), Gaps = 6/46 (13%)
Frame = +2
Query: 164 GHIVGFDEYMNIVLDEAEEVHMK------TKNRKQIGRIMMKGDNI 283
G + FD+++N++L E EE ++ + ++ +G I+++GDNI
Sbjct: 27 GTFLAFDKHLNVILSECEEYRIRKQGIHEIETKRTLGMIIVRGDNI 72
>UniRef50_Q59ZT4 Cluster: Potential RNA processing complex subunit
Lsm5; n=2; Saccharomycetales|Rep: Potential RNA
processing complex subunit Lsm5 - Candida albicans
(Yeast)
Length = 119
Score = 33.9 bits (74), Expect = 1.4
Identities = 22/73 (30%), Positives = 40/73 (54%)
Frame = +2
Query: 74 VQPINLIFRYLQNRSRVQIWLYENVNLRIEGHIVGFDEYMNIVLDEAEEVHMKTKNRKQI 253
V P+ +I R + R RV + + N G ++GFD+Y+N+VL++ EV I
Sbjct: 52 VLPLEVIDRSVGKRVRVLMTGDKEFN----GKLIGFDDYVNMVLEDVTEV----DGGAPI 103
Query: 254 GRIMMKGDNITLI 292
++++ G +I +I
Sbjct: 104 KKMLLNGGHIAMI 116
>UniRef50_Q98S49 Cluster: Small nuclear ribonucleoprotein F; n=1;
Guillardia theta|Rep: Small nuclear ribonucleoprotein F
- Guillardia theta (Cryptomonas phi)
Length = 73
Score = 33.5 bits (73), Expect = 1.8
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = +2
Query: 164 GHIVGFDEYMNIVLDEAEEVHMKTKNRKQIGRIMMKGDNITLI 292
G +G D YMNI+LD EV + +N +G ++++ +NI I
Sbjct: 27 GIFIGSDNYMNIILDSCSEV-ITEQNLGFLGLVLIRCNNILFI 68
>UniRef50_Q8ILU8 Cluster: Ribonucleoprotein, putative; n=2;
Plasmodium|Rep: Ribonucleoprotein, putative - Plasmodium
falciparum (isolate 3D7)
Length = 201
Score = 33.5 bits (73), Expect = 1.8
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 13/69 (18%)
Frame = +2
Query: 116 SRVQIWLYENVNLRIE------GHIVGFDEYMNIVLDEAEEVH-MKTKN------RKQIG 256
SR++ WL V + I G + +D +MNIVL +AEE +K++ ++ +G
Sbjct: 5 SRLETWLQYRVRVTISDTRYFVGTFLSYDRHMNIVLVDAEEFRKVKSQENSLKEIKRVVG 64
Query: 257 RIMMKGDNI 283
I+++G+NI
Sbjct: 65 LILIRGENI 73
>UniRef50_Q17E06 Cluster: Small nuclear ribonucleoprotein, core,
putative; n=2; Culicidae|Rep: Small nuclear
ribonucleoprotein, core, putative - Aedes aegypti
(Yellowfever mosquito)
Length = 162
Score = 33.5 bits (73), Expect = 1.8
Identities = 17/46 (36%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Frame = +2
Query: 164 GHIVGFDEYMNIVLDEA-EEVHMKTKNRKQI--GRIMMKGDNITLI 292
G + GFD+ +NI+LDE+ E V+ +Q+ G +++GDN+ +I
Sbjct: 91 GTLKGFDQTINIILDESHERVYSMNAGIEQVVLGLHIIRGDNVAVI 136
>UniRef50_A1RY58 Cluster: Like-Sm ribonucleoprotein, core; n=1;
Thermofilum pendens Hrk 5|Rep: Like-Sm
ribonucleoprotein, core - Thermofilum pendens (strain
Hrk 5)
Length = 100
Score = 33.5 bits (73), Expect = 1.8
Identities = 17/64 (26%), Positives = 34/64 (53%)
Frame = +2
Query: 101 YLQNRSRVQIWLYENVNLRIEGHIVGFDEYMNIVLDEAEEVHMKTKNRKQIGRIMMKGDN 280
+L+N+S +++ G + D MN+VLD+A+E+ K Q+G + ++G N
Sbjct: 6 HLRNQSGKGVFVKLKDGSEYMGKLRMTDAAMNLVLDDAKELTETNKVVAQLGTVFIRGSN 65
Query: 281 ITLI 292
+ +
Sbjct: 66 LLFV 69
>UniRef50_Q8U0P4 Cluster: Putative snRNP Sm-like protein; n=11;
Euryarchaeota|Rep: Putative snRNP Sm-like protein -
Pyrococcus furiosus
Length = 76
Score = 33.5 bits (73), Expect = 1.8
Identities = 15/43 (34%), Positives = 29/43 (67%)
Frame = +2
Query: 164 GHIVGFDEYMNIVLDEAEEVHMKTKNRKQIGRIMMKGDNITLI 292
G ++G+D ++N+VL A E+ + K+ G+I+++GDN+ I
Sbjct: 29 GKLIGYDIHLNVVLANA-ELLQDGEVVKKYGKIVIRGDNVLAI 70
>UniRef50_Q6BPY4 Cluster: Debaryomyces hansenii chromosome E of
strain CBS767 of Debaryomyces hansenii; n=1;
Debaryomyces hansenii|Rep: Debaryomyces hansenii
chromosome E of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 101
Score = 33.1 bits (72), Expect = 2.4
Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +2
Query: 161 EGHIVGFDEYMNIVLDEAEEVHMKTKNRKQ--IGRIMMKGDNITLIQ 295
+G ++ D YMN+ LD+ EV + +K+ IG I ++ +N+ I+
Sbjct: 33 KGTLISIDNYMNLQLDKTSEVIYEDGEKKEEVIGEIFIRCNNVLFIR 79
>UniRef50_A6QY75 Cluster: Predicted protein; n=2; Fungi/Metazoa
group|Rep: Predicted protein - Ajellomyces capsulatus
NAm1
Length = 171
Score = 33.1 bits (72), Expect = 2.4
Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Frame = +2
Query: 143 NVNLRIEGHIVGFDEYMNIVLDEAEEVHMK---TKNRKQIGRIMMKGDNITLIQNVNPNA 313
N + G + G+D+ MN+VLD+ EV + + +G I+ +G + LI V+ +
Sbjct: 100 NGGREVTGTLKGYDQLMNLVLDDVREVMRDDEGNQTTRSLGLIVARGTLLVLISPVDGSE 159
Query: 314 SV 319
+
Sbjct: 160 EI 161
>UniRef50_Q8ZYP8 Cluster: Small nuclear ribonucleoprotein homolog;
n=4; Pyrobaculum|Rep: Small nuclear ribonucleoprotein
homolog - Pyrobaculum aerophilum
Length = 85
Score = 33.1 bits (72), Expect = 2.4
Identities = 12/45 (26%), Positives = 28/45 (62%)
Frame = +2
Query: 158 IEGHIVGFDEYMNIVLDEAEEVHMKTKNRKQIGRIMMKGDNITLI 292
++G + +D MN+VL++A E+ + + + GRI+++G + +
Sbjct: 34 VKGVLTAYDGCMNLVLNDAAELDKSGEPKTRYGRIVIRGSQVIYV 78
>UniRef50_Q115S2 Cluster: Protein splicing site; n=2; cellular
organisms|Rep: Protein splicing site - Trichodesmium
erythraeum (strain IMS101)
Length = 2605
Score = 32.7 bits (71), Expect = 3.1
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = +2
Query: 149 NLRIEGHIVGFDEYMNIVLDEAEEVHMKTKNRKQIGRIMMKGDNITLIQNV 301
N +E H++ +DE +N++ A + KNR G+ +N+T + +
Sbjct: 474 NQELENHLIFWDELVNVLAKFAASKNQSLKNRTAKGKSPKNSENLTTTETI 524
Score = 32.7 bits (71), Expect = 3.1
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = +2
Query: 149 NLRIEGHIVGFDEYMNIVLDEAEEVHMKTKNRKQIGRIMMKGDNITLIQNV 301
N +E H++ +DE +N++ A + KNR G+ +N+T + +
Sbjct: 1650 NQELENHLIFWDELVNVLAKFATSKNQSLKNRTAKGKSPKNSENLTTTETI 1700
Score = 32.7 bits (71), Expect = 3.1
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = +2
Query: 149 NLRIEGHIVGFDEYMNIVLDEAEEVHMKTKNRKQIGRIMMKGDNITLIQNV 301
N +E H++ +DE +N++ A + KNR G+ +N+T + +
Sbjct: 1902 NQELENHLIFWDELVNVLAKFATSKNQSLKNRTAKGKSPKNSENLTTTETI 1952
Score = 31.1 bits (67), Expect = 9.6
Identities = 12/48 (25%), Positives = 25/48 (52%)
Frame = +2
Query: 158 IEGHIVGFDEYMNIVLDEAEEVHMKTKNRKQIGRIMMKGDNITLIQNV 301
+E H++ +DE +N++ A + KNR G+ +N+T + +
Sbjct: 813 LENHLIFWDELVNVLAKFAASKNQSLKNRTAKGKSPKNSENLTTTETI 860
>UniRef50_Q4Q3L7 Cluster: Small nuclear ribonucleoprotein SmD2; n=7;
Trypanosomatidae|Rep: Small nuclear ribonucleoprotein
SmD2 - Leishmania major
Length = 103
Score = 32.7 bits (71), Expect = 3.1
Identities = 17/74 (22%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Frame = +2
Query: 80 PINLIFRYLQNRSRVQIWLYENVNLRIEGHIVGFDEYMNIVLDEAEEV---HMKTKNRKQ 250
P +L+ ++ + RV I + L H++ FD++ N+VL +E+ H + ++
Sbjct: 28 PFSLLDTAMKEKKRVFIQCRNSKALL--AHVIAFDKHFNLVLKGVQEITESHGSEQKQRT 85
Query: 251 IGRIMMKGDNITLI 292
I + ++G+++ I
Sbjct: 86 IENLFLRGESVIFI 99
>UniRef50_A2D8C6 Cluster: Dynein heavy chain family protein; n=2;
cellular organisms|Rep: Dynein heavy chain family
protein - Trichomonas vaginalis G3
Length = 3872
Score = 32.7 bits (71), Expect = 3.1
Identities = 17/80 (21%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Frame = +2
Query: 185 EYMNIVLDEAEEVHMKTKNRKQIGRIMMKGDNITLIQNVNPNASV**VIKYRISEESFLV 364
EY+ + D A+E+ K+ + R+++ I+ NPN +++ +I++E +
Sbjct: 215 EYLQFIADIAKEIVAVDKSVRDPQRLVVNESKFPEIKRKNPNIEQLKILEVKINQEKINL 274
Query: 365 FKCIIKSVRNI--FYVITDH 418
+ + + ++N+ F + TD+
Sbjct: 275 TRMVDEEIQNLANFILQTDY 294
>UniRef50_O74499 Cluster: U6 snRNP-associated protein Lsm7; n=19;
Eukaryota|Rep: U6 snRNP-associated protein Lsm7 -
Schizosaccharomyces pombe (Fission yeast)
Length = 113
Score = 32.7 bits (71), Expect = 3.1
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +2
Query: 155 RIEGHIVGFDEYMNIVLDEAEEVHMKTKNRKQIGRIMMKG 274
+I G + GFD+ MN+VLD+ EE ++ K G I G
Sbjct: 45 QITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRKLG 84
>UniRef50_Q701X8 Cluster: Putative uncharacterized protein; n=1;
uncultured crenarchaeote|Rep: Putative uncharacterized
protein - uncultured crenarchaeote
Length = 89
Score = 32.7 bits (71), Expect = 3.1
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 13/58 (22%)
Frame = +2
Query: 158 IEGHIVGFDEYMNIVLDEAEEVHMKTKNRK-------------QIGRIMMKGDNITLI 292
++G I GFD+ MNIV+ EA EV + N Q+G +++GDN+ I
Sbjct: 29 VKGKIKGFDKQMNIVITEATEVIEQQSNNNDNSEKGKGQEQETQVGDALIRGDNVITI 86
>UniRef50_Q00WM9 Cluster: Chromosome 13 contig 1, DNA sequence; n=2;
Ostreococcus|Rep: Chromosome 13 contig 1, DNA sequence -
Ostreococcus tauri
Length = 286
Score = 32.3 bits (70), Expect = 4.1
Identities = 22/68 (32%), Positives = 40/68 (58%), Gaps = 10/68 (14%)
Frame = -1
Query: 283 YIVSLHH-YSTDLFP------VLSFHMNFF--SFIQN-NVHVFVKSHDVPLDSQIHVLVK 134
++ +HH +S L+P + ++H+N+F S + N N+ VFV + +PL + V+V
Sbjct: 168 WLFIVHHMFSIILWPYALSRGLCAYHINYFLVSEVTNFNMSVFVHAGWIPLFISVRVVVI 227
Query: 133 PNLYTASI 110
P LY+A +
Sbjct: 228 PKLYSAFV 235
>UniRef50_Q5DGC2 Cluster: SJCHGC05770 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC05770 protein - Schistosoma
japonicum (Blood fluke)
Length = 139
Score = 32.3 bits (70), Expect = 4.1
Identities = 20/64 (31%), Positives = 38/64 (59%), Gaps = 6/64 (9%)
Frame = +2
Query: 146 VNLRIEGHIVGF----DEYMNIVLDEA-EEVHMKTKNRK-QIGRIMMKGDNITLIQNVNP 307
V+LR +GF D++ N+VL A E +H++ K G ++++G+NI +I ++NP
Sbjct: 24 VSLRGGRMFIGFLRIIDQFGNVVLHNAVERIHVENKFCDVPQGILLIRGENIIIIGDLNP 83
Query: 308 NASV 319
++
Sbjct: 84 EVNI 87
>UniRef50_A3H6D3 Cluster: Like-Sm ribonucleoprotein, core; n=1;
Caldivirga maquilingensis IC-167|Rep: Like-Sm
ribonucleoprotein, core - Caldivirga maquilingensis
IC-167
Length = 86
Score = 32.3 bits (70), Expect = 4.1
Identities = 14/46 (30%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +2
Query: 158 IEGHIVGFDEYMNIVLDEAEEVHMKTKN-RKQIGRIMMKGDNITLI 292
+ G + D+ MNIVLD+AEE+ +T + G+++++G+ + +
Sbjct: 34 LSGTLRFIDQCMNIVLDDAEELDTRTNQVIVRYGKVLIRGNQVLYV 79
>UniRef50_UPI0000499A4F Cluster: small nuclear ribonucleoprotein F;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: small nuclear
ribonucleoprotein F - Entamoeba histolytica HM-1:IMSS
Length = 205
Score = 31.9 bits (69), Expect = 5.5
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 8/48 (16%)
Frame = +2
Query: 164 GHIVGFDEYMNIVLDEAEE----VHMKTKNRKQI----GRIMMKGDNI 283
G + FD+YMN++L E E ++ KT+ K+I G ++++GD I
Sbjct: 28 GKFLAFDKYMNMILSETIEKRTVINKKTREEKEIERSLGMMLLRGDCI 75
>UniRef50_UPI0000F31710 Cluster: CDNA FLJ45698 fis, clone
FEBRA2017811.; n=1; Bos taurus|Rep: CDNA FLJ45698 fis,
clone FEBRA2017811. - Bos Taurus
Length = 431
Score = 31.9 bits (69), Expect = 5.5
Identities = 13/67 (19%), Positives = 33/67 (49%)
Frame = -1
Query: 319 H*CVRIYILY*RYIVSLHHYSTDLFPVLSFHMNFFSFIQNNVHVFVKSHDVPLDSQIHVL 140
H C +YI+ +++ H Y+ + + H++ ++ + H+ + +D+ IHV
Sbjct: 100 HKCTCMYIVIYTHVMCAHTYTLHVHTHMLAHIDTYTHTHMHTHMCTHMYTCYVDTNIHVY 159
Query: 139 VKPNLYT 119
+ + +T
Sbjct: 160 ISMHTHT 166
>UniRef50_Q6G1Y4 Cluster: ABC transporter, ATP-binding protein;
n=39; Bacteria|Rep: ABC transporter, ATP-binding protein
- Bartonella henselae (Rochalimaea henselae)
Length = 620
Score = 31.9 bits (69), Expect = 5.5
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = +2
Query: 98 RYLQNRSRVQIWLYENVNLRIEGHIVGFDEYMNIVLDEAEEVHMKTKNRKQIGR 259
R+L+N +R +WL + R+E F+ + + L+ EE + K R+QI R
Sbjct: 177 RFLENVTRSTVWLDRGITKRLEKRFSEFENWRDKALE--EEALEQHKLRRQIAR 228
>UniRef50_Q2R066 Cluster: Small nuclear ribonucleoprotein F,
putative, expressed; n=5; Oryza sativa|Rep: Small
nuclear ribonucleoprotein F, putative, expressed - Oryza
sativa subsp. japonica (Rice)
Length = 86
Score = 31.9 bits (69), Expect = 5.5
Identities = 14/56 (25%), Positives = 32/56 (57%)
Frame = +2
Query: 152 LRIEGHIVGFDEYMNIVLDEAEEVHMKTKNRKQIGRIMMKGDNITLIQNVNPNASV 319
+ +G++V D YMN+ L EE ++ + +G I+++ +N+ ++ V +A +
Sbjct: 28 MEYKGYLVSVDSYMNLQLANTEE-YIDGQFSGNLGEILIRCNNVLYLRGVPEDAEI 82
>UniRef50_Q7QPB0 Cluster: GLP_122_3813_3433; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_122_3813_3433 - Giardia lamblia ATCC
50803
Length = 126
Score = 31.9 bits (69), Expect = 5.5
Identities = 24/71 (33%), Positives = 40/71 (56%)
Frame = +2
Query: 80 PINLIFRYLQNRSRVQIWLYENVNLRIEGHIVGFDEYMNIVLDEAEEVHMKTKNRKQIGR 259
P+ L+ L++R V L +N N I G + FDE+MN++L AEE + NR
Sbjct: 53 PLYLLKTSLEDRVSV---LLQN-NSSITGLLASFDEHMNLILINAEETG-HSLNR-FFPL 106
Query: 260 IMMKGDNITLI 292
++++GD+I +
Sbjct: 107 LVIRGDSIIFV 117
>UniRef50_Q4N4E0 Cluster: Small nuclear ribonucleoprotein G,
putative; n=2; Piroplasmida|Rep: Small nuclear
ribonucleoprotein G, putative - Theileria parva
Length = 86
Score = 31.9 bits (69), Expect = 5.5
Identities = 16/47 (34%), Positives = 31/47 (65%)
Frame = +2
Query: 143 NVNLRIEGHIVGFDEYMNIVLDEAEEVHMKTKNRKQIGRIMMKGDNI 283
N + + G + G+D +MNIVLD A EV +++ +G ++++G++I
Sbjct: 30 NGSRHVVGVLRGYDTFMNIVLDNALEV--VGEDQVDLGVVVVRGNSI 74
>UniRef50_Q8ZYG5 Cluster: Small nuclear ribonucleoprotein homolog;
n=5; Thermoproteaceae|Rep: Small nuclear
ribonucleoprotein homolog - Pyrobaculum aerophilum
Length = 80
Score = 31.9 bits (69), Expect = 5.5
Identities = 15/48 (31%), Positives = 31/48 (64%)
Frame = +2
Query: 158 IEGHIVGFDEYMNIVLDEAEEVHMKTKNRKQIGRIMMKGDNITLIQNV 301
I G + FD+++N++L++AEE+ N + G ++++G+N+ I V
Sbjct: 34 IRGILRSFDQHVNLLLEDAEEI--IDGNVYKRGTMVVRGENVLFISPV 79
>UniRef50_UPI00006CFE60 Cluster: hypothetical protein
TTHERM_00691460; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00691460 - Tetrahymena
thermophila SB210
Length = 518
Score = 31.5 bits (68), Expect = 7.2
Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Frame = +2
Query: 5 RVFAQ*YIFEMAYK-GPPKVQKVMVQPINLIFRYLQNRSRVQIWLYENVNLRIEGHIVGF 181
++F I ++ Y+ GP + +M+ +F N S V+IW Y+N L +E H
Sbjct: 420 KLFFDKKISQIMYQLGPLDIHGIMIDETMKLFISYHN-SYVKIWNYQNKQLLMEAHFTEQ 478
Query: 182 DEYMNIV--LDEAEEVHMKTKNR 244
+Y + LD+ + + K +
Sbjct: 479 GQYQQAISLLDKGFIIFINQKTK 501
>UniRef50_Q238V6 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1161
Score = 31.5 bits (68), Expect = 7.2
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = -2
Query: 393 LRTLFMMHLNTRNDSSLILYFITYY--TDAFGFTF 295
LR LF+ H NT+ + +++Y +T + D F TF
Sbjct: 1009 LRFLFLSHRNTKTEKEMLIYVLTVFIILDIFSMTF 1043
>UniRef50_Q4P7M4 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 232
Score = 31.5 bits (68), Expect = 7.2
Identities = 15/39 (38%), Positives = 26/39 (66%)
Frame = +2
Query: 143 NVNLRIEGHIVGFDEYMNIVLDEAEEVHMKTKNRKQIGR 259
N + +I G ++ FD +MN+VL +++E + K K+RK R
Sbjct: 24 NDSRQIVGQLLAFDAHMNLVLADSQE-YRKVKSRKAKAR 61
>UniRef50_UPI00015A7DD8 Cluster: UPI00015A7DD8 related cluster; n=1;
Danio rerio|Rep: UPI00015A7DD8 UniRef100 entry - Danio
rerio
Length = 396
Score = 31.1 bits (67), Expect = 9.6
Identities = 20/82 (24%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Frame = -1
Query: 343 YPVLYNLLH*CVRIYILY*RYIVSLHHYSTDLFPVL--SFHMNFFSFIQNNVHVFVKSH- 173
YP +++ ++ C+ +I +S+H + ++P + S H+ F SFI + +H+ + +
Sbjct: 209 YPCIHSFIYPCIHSFIH-----ISMHSF---IYPCIYISMHLLFNSFIHSCIHISLHAFI 260
Query: 172 DVPLDSQIHVLVKPNLYTASIL 107
+ + S IH L+ ++Y S++
Sbjct: 261 HIFMHSYIHALI--HIYMHSLI 280
>UniRef50_A4S5K5 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 126
Score = 31.1 bits (67), Expect = 9.6
Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Frame = +2
Query: 158 IEGHIVGFDEYMNIVLDEAEE--VHMKTKNRKQIGRIMMKGDNITLIQNVNPNASV 319
I G + FD++ NIVL+ A E + K + +G +++G+N+ L+ +V N +
Sbjct: 31 IIGTLRSFDQFANIVLESAVERIIVGKMFSDIPLGLYIVRGENVVLMGDVGANGDL 86
>UniRef50_Q7PT02 Cluster: ENSANGP00000018479; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000018479 - Anopheles gambiae
str. PEST
Length = 257
Score = 31.1 bits (67), Expect = 9.6
Identities = 17/67 (25%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Frame = +2
Query: 56 KVQKVMVQPINLIFRYLQNRSRVQIWLYENVNLRIEGHIVG----FDEYMNIVLDEAEEV 223
+++K P+ + R+++ R+RV++ + + +R GH+ G FD++ N+ L + E
Sbjct: 116 RLEKGFEGPLGQLQRWMEGRNRVRVSIRKQKGVR--GHVSGVLELFDKHWNLALSDVCET 173
Query: 224 HMKTKNR 244
+ K R
Sbjct: 174 WTRRKYR 180
>UniRef50_A0D0Y9 Cluster: Chromosome undetermined scaffold_33, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_33,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 104
Score = 31.1 bits (67), Expect = 9.6
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +2
Query: 98 RYLQNRSRVQIWLYENVNLRIEGHIVGFDEYMNIVLDEAEEV 223
+Y R ++++ N I G ++GFD +MN+VLD +E+
Sbjct: 20 KYFGKRLKIKL----NAKRTIIGTVIGFDIFMNLVLDHCKEL 57
>UniRef50_Q0V2I0 Cluster: Predicted protein; n=1; Phaeosphaeria
nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 441
Score = 31.1 bits (67), Expect = 9.6
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Frame = +2
Query: 101 YLQNRSRVQIWLYENVNLRIEGHIVGFDEYMNIVLDEAEEVHMKTKNR----KQIGRIMM 268
++ NR RV +L++NV L EG+ + V ++ E+ +T R QIGR +
Sbjct: 6 WMFNRGRVSPYLHDNVPLMQEGNAEDSSSVNSTVRIDSVEMRSETNPRGTMMDQIGRKVG 65
Query: 269 KGDNITLIQNVNPNA 313
GD N PN+
Sbjct: 66 PGDEDFEDGNFGPNS 80
>UniRef50_A4RQ29 Cluster: U6 snRNA-associated Sm-like protein LSm6;
n=2; Pezizomycotina|Rep: U6 snRNA-associated Sm-like
protein LSm6 - Magnaporthe grisea (Rice blast fungus)
(Pyricularia grisea)
Length = 83
Score = 31.1 bits (67), Expect = 9.6
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +2
Query: 143 NVNLRIEGHIVGFDEYMNIVLDEAEEVHMKTKNRKQIGRIMMKGDNITLI 292
N + +G + D YMNI L++AEE + + ++ G ++G+N+ I
Sbjct: 31 NSGVIYKGELQSVDGYMNIALEKAEE-WVAGQKKRSYGDAFVRGNNVMYI 79
>UniRef50_P34659 Cluster: Probable small nuclear ribonucleoprotein
F; n=13; Eukaryota|Rep: Probable small nuclear
ribonucleoprotein F - Caenorhabditis elegans
Length = 85
Score = 31.1 bits (67), Expect = 9.6
Identities = 14/51 (27%), Positives = 30/51 (58%)
Frame = +2
Query: 152 LRIEGHIVGFDEYMNIVLDEAEEVHMKTKNRKQIGRIMMKGDNITLIQNVN 304
+ +G +V D YMN+ L AEE ++ ++ +G I+++ +N+ + V+
Sbjct: 29 MEYKGVLVAVDSYMNLQLAHAEE-YIDGNSQGNLGEILIRCNNVLYVGGVD 78
>UniRef50_Q4PSI6 Cluster: FBD-associated F-box protein At4g13985;
n=3; Arabidopsis thaliana|Rep: FBD-associated F-box
protein At4g13985 - Arabidopsis thaliana (Mouse-ear
cress)
Length = 459
Score = 31.1 bits (67), Expect = 9.6
Identities = 25/99 (25%), Positives = 45/99 (45%)
Frame = +2
Query: 8 VFAQ*YIFEMAYKGPPKVQKVMVQPINLIFRYLQNRSRVQIWLYENVNLRIEGHIVGFDE 187
VF + + FEM G P ++ + V INL VQ+ + +L ++ D+
Sbjct: 187 VFDEDFAFEMLVSGCPVLESLSVNKINL----NDISESVQV---SSQSLLSFSYVADDDD 239
Query: 188 YMNIVLDEAEEVHMKTKNRKQIGRIMMKGDNITLIQNVN 304
Y+ +V+D A +H N K+ +MK L +++
Sbjct: 240 YLEVVID-APRLHYLKLNDKRTASFIMKNHGSLLKADID 277
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 395,990,447
Number of Sequences: 1657284
Number of extensions: 7264927
Number of successful extensions: 17442
Number of sequences better than 10.0: 106
Number of HSP's better than 10.0 without gapping: 17038
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17426
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 19465676618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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