Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_A09
         (418 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    22   2.8  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   3.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   4.8  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    20   8.4  

>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -3

Query: 203 KQCSCIRQIPRCA 165
           K+C  +R +P CA
Sbjct: 220 KKCDWVRNVPECA 232


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 15/56 (26%), Positives = 23/56 (41%)
 Frame = -2

Query: 168 CPSILKFTFS*SQICTRLLFCKYLKIRLMGCTITF*TLGGPL*AISKMYYCAKTLV 1
           C  + K     S I   L F ++  IRL  C I F  + G       ++   +TL+
Sbjct: 117 CYHLQKINVQQSGIFINLPFLEHNLIRLKNCVIYFNRIFGWNILFGHIFTVCRTLI 172


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 7/71 (9%)
 Frame = +2

Query: 47   GPPKVQKVMVQPINLIFRYLQNRSRVQIWLYENVNLRIEGHI-------VGFDEYMNIVL 205
            GP +  +   QP  L +  + NR R Q W+         G         VGF++ +  V 
Sbjct: 890  GPGEAGEYTKQPGMLAYYEICNRIRNQRWIVNRDTSGATGPFAYHGDQWVGFED-IKSVR 948

Query: 206  DEAEEVHMKTK 238
            D+AE  ++KTK
Sbjct: 949  DKAE--YIKTK 957



 Score = 20.6 bits (41), Expect = 6.4
 Identities = 8/29 (27%), Positives = 17/29 (58%)
 Frame = -1

Query: 256  TDLFPVLSFHMNFFSFIQNNVHVFVKSHD 170
            +D+ P L  H+N+   + ++  + +K HD
Sbjct: 2343 SDIDPSLCTHINYGFAVLDSSSMTLKPHD 2371



 Score = 20.2 bits (40), Expect = 8.4
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = -2

Query: 126  CTRLLFCKYLKIRLMGC 76
            CTR L C + K  +  C
Sbjct: 1291 CTRYLHCLWGKYEVFNC 1307


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 218 LQLHPKQCSCIRQIPRCA 165
           L L PK    ++ +PRCA
Sbjct: 473 LVLRPKGSIKVKFVPRCA 490


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,432
Number of Sequences: 336
Number of extensions: 2133
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9174063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)