Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_A08
(478 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X03342-1|CAA27048.1| 135|Homo sapiens protein ( Human mRNA for ... 234 1e-61
BC070209-1|AAH70209.1| 135|Homo sapiens ribosomal protein L32 p... 234 1e-61
BC011514-1|AAH11514.1| 135|Homo sapiens ribosomal protein L32 p... 234 1e-61
AB061831-1|BAB79469.1| 135|Homo sapiens ribosomal protein L32 p... 234 1e-61
BC015974-1|AAH15974.1| 107|Homo sapiens RPS29 protein protein. 116 4e-26
BC053996-1|AAH53996.1| 33|Homo sapiens RPL32P3 protein protein. 51 2e-06
BC015389-1|AAH15389.1| 82|Homo sapiens RPL32P3 protein protein. 49 7e-06
U35113-1|AAA78935.1| 715|Homo sapiens mta1 protein. 32 0.90
BC142941-1|AAI42942.1| 715|Homo sapiens metastasis associated 1... 32 0.90
BC009443-1|AAH09443.2| 263|Homo sapiens MTA1 protein protein. 32 0.90
X62320-1|CAA44196.1| 593|Homo sapiens Epithelin 1 & 2 protein. 29 6.3
BC117694-1|AAI17695.1| 1106|Homo sapiens DOCK4 protein protein. 29 6.3
BC117689-1|AAI17690.1| 2011|Homo sapiens DOCK4 protein protein. 29 6.3
BC117688-1|AAI17689.1| 1966|Homo sapiens dedicator of cytokinesi... 29 6.3
BC010577-1|AAH10577.1| 593|Homo sapiens granulin protein. 29 6.3
AY233380-1|AAO73565.1| 1966|Homo sapiens DOCK4 protein. 29 6.3
AY124489-1|AAM94026.1| 593|Homo sapiens PC cell-derived growth ... 29 6.3
AK222522-1|BAD96242.1| 593|Homo sapiens granulin variant protein. 29 6.3
AK023348-1|BAB14535.1| 413|Homo sapiens protein ( Homo sapiens ... 29 6.3
AF055008-1|AAC09359.1| 593|Homo sapiens epithelin 1 and 2 protein. 29 6.3
D86981-1|BAA13217.1| 681|Homo sapiens KIAA0228 protein protein. 29 8.3
BC018121-1|AAH18121.1| 585|Homo sapiens amyloid beta precursor ... 29 8.3
AF017782-1|AAC83973.1| 585|Homo sapiens PAT1 protein. 29 8.3
>X03342-1|CAA27048.1| 135|Homo sapiens protein ( Human mRNA for
ribosomal protein L32. ).
Length = 135
Score = 234 bits (572), Expect = 1e-61
Identities = 108/132 (81%), Positives = 120/132 (90%)
Frame = +1
Query: 82 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGS 261
A+RP+ +P IVKKRTK+FIRHQSDRY K+KRNWRKPRGIDNRVRRRFKGQ LMPNIGYGS
Sbjct: 3 ALRPLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGS 62
Query: 262 NKKTRHMLPSGFRKVLVHNVRELEILMMQNRKYCAEIAHGVSSKKRKAIVERAQQLSIRV 441
NKKT+HMLPSGFRK LVHNV+ELE+L+M N+ YCAEIAH VSSK RKAIVERA QL+IRV
Sbjct: 63 NKKTKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRV 122
Query: 442 TNAAARLRSQEN 477
TN ARLRS+EN
Sbjct: 123 TNPNARLRSEEN 134
>BC070209-1|AAH70209.1| 135|Homo sapiens ribosomal protein L32
protein.
Length = 135
Score = 234 bits (572), Expect = 1e-61
Identities = 108/132 (81%), Positives = 120/132 (90%)
Frame = +1
Query: 82 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGS 261
A+RP+ +P IVKKRTK+FIRHQSDRY K+KRNWRKPRGIDNRVRRRFKGQ LMPNIGYGS
Sbjct: 3 ALRPLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGS 62
Query: 262 NKKTRHMLPSGFRKVLVHNVRELEILMMQNRKYCAEIAHGVSSKKRKAIVERAQQLSIRV 441
NKKT+HMLPSGFRK LVHNV+ELE+L+M N+ YCAEIAH VSSK RKAIVERA QL+IRV
Sbjct: 63 NKKTKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRV 122
Query: 442 TNAAARLRSQEN 477
TN ARLRS+EN
Sbjct: 123 TNPNARLRSEEN 134
>BC011514-1|AAH11514.1| 135|Homo sapiens ribosomal protein L32
protein.
Length = 135
Score = 234 bits (572), Expect = 1e-61
Identities = 108/132 (81%), Positives = 120/132 (90%)
Frame = +1
Query: 82 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGS 261
A+RP+ +P IVKKRTK+FIRHQSDRY K+KRNWRKPRGIDNRVRRRFKGQ LMPNIGYGS
Sbjct: 3 ALRPLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGS 62
Query: 262 NKKTRHMLPSGFRKVLVHNVRELEILMMQNRKYCAEIAHGVSSKKRKAIVERAQQLSIRV 441
NKKT+HMLPSGFRK LVHNV+ELE+L+M N+ YCAEIAH VSSK RKAIVERA QL+IRV
Sbjct: 63 NKKTKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRV 122
Query: 442 TNAAARLRSQEN 477
TN ARLRS+EN
Sbjct: 123 TNPNARLRSEEN 134
>AB061831-1|BAB79469.1| 135|Homo sapiens ribosomal protein L32
protein.
Length = 135
Score = 234 bits (572), Expect = 1e-61
Identities = 108/132 (81%), Positives = 120/132 (90%)
Frame = +1
Query: 82 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGS 261
A+RP+ +P IVKKRTK+FIRHQSDRY K+KRNWRKPRGIDNRVRRRFKGQ LMPNIGYGS
Sbjct: 3 ALRPLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGS 62
Query: 262 NKKTRHMLPSGFRKVLVHNVRELEILMMQNRKYCAEIAHGVSSKKRKAIVERAQQLSIRV 441
NKKT+HMLPSGFRK LVHNV+ELE+L+M N+ YCAEIAH VSSK RKAIVERA QL+IRV
Sbjct: 63 NKKTKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRV 122
Query: 442 TNAAARLRSQEN 477
TN ARLRS+EN
Sbjct: 123 TNPNARLRSEEN 134
>BC015974-1|AAH15974.1| 107|Homo sapiens RPS29 protein protein.
Length = 107
Score = 116 bits (279), Expect = 4e-26
Identities = 54/80 (67%), Positives = 64/80 (80%)
Frame = +1
Query: 238 MPNIGYGSNKKTRHMLPSGFRKVLVHNVRELEILMMQNRKYCAEIAHGVSSKKRKAIVER 417
MPNIGYG NKKT+H+LPSGF K LVHNV+ELE+L++ N+ YC EI H VSSK KAI+ER
Sbjct: 27 MPNIGYGRNKKTKHILPSGFWKFLVHNVKELEVLLVSNKSYCVEITHDVSSKNCKAILER 86
Query: 418 AQQLSIRVTNAAARLRSQEN 477
A Q+ IRVTNA A L S E+
Sbjct: 87 AAQVVIRVTNANASLHSAES 106
>BC053996-1|AAH53996.1| 33|Homo sapiens RPL32P3 protein protein.
Length = 33
Score = 51.2 bits (117), Expect = 2e-06
Identities = 22/31 (70%), Positives = 27/31 (87%)
Frame = +1
Query: 82 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKR 174
A+R + +P IVKKRTK+FIRHQSDRY K+KR
Sbjct: 3 ALRSLVKPKIVKKRTKKFIRHQSDRYVKIKR 33
>BC015389-1|AAH15389.1| 82|Homo sapiens RPL32P3 protein protein.
Length = 82
Score = 49.2 bits (112), Expect = 7e-06
Identities = 21/30 (70%), Positives = 26/30 (86%)
Frame = +1
Query: 82 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLK 171
A+R + +P IVKKRTK+FIRHQSDRY K+K
Sbjct: 3 ALRSLVKPKIVKKRTKKFIRHQSDRYVKIK 32
>U35113-1|AAA78935.1| 715|Homo sapiens mta1 protein.
Length = 715
Score = 32.3 bits (70), Expect = 0.90
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +1
Query: 169 KRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPS 291
KR++ + G+D +++R LMP+ G ++ +TRHM PS
Sbjct: 582 KRSYEQHNGVDGNMKKRL----LMPSRGLANHGQTRHMGPS 618
>BC142941-1|AAI42942.1| 715|Homo sapiens metastasis associated 1
protein.
Length = 715
Score = 32.3 bits (70), Expect = 0.90
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +1
Query: 169 KRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPS 291
KR++ + G+D +++R LMP+ G ++ +TRHM PS
Sbjct: 582 KRSYEQHNGVDGNMKKRL----LMPSRGLANHGQTRHMGPS 618
>BC009443-1|AAH09443.2| 263|Homo sapiens MTA1 protein protein.
Length = 263
Score = 32.3 bits (70), Expect = 0.90
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +1
Query: 169 KRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPS 291
KR++ + G+D +++R LMP+ G ++ +TRHM PS
Sbjct: 130 KRSYEQHNGVDGNMKKRL----LMPSRGLANHGQTRHMGPS 166
>X62320-1|CAA44196.1| 593|Homo sapiens Epithelin 1 & 2 protein.
Length = 593
Score = 29.5 bits (63), Expect = 6.3
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = -1
Query: 391 SRRRHVRFPRSISCSASSGSPVRERCGPRLYENRWVAC 278
+RR + PR I C + PV + C P L W C
Sbjct: 431 ARRASLSHPRDIGCDQHTSCPVGQTCCPSL-GGSWACC 467
>BC117694-1|AAI17695.1| 1106|Homo sapiens DOCK4 protein protein.
Length = 1106
Score = 29.5 bits (63), Expect = 6.3
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +2
Query: 92 LFTDRQSSKRGRKDLFVTSRIVMINLRGTGVNREVSTTEY 211
LF D SS+ RKD+++T I+ I G G + + +Y
Sbjct: 259 LFVDLGSSEL-RKDIYITVHIIRIGRMGAGEKKNACSVQY 297
>BC117689-1|AAI17690.1| 2011|Homo sapiens DOCK4 protein protein.
Length = 2011
Score = 29.5 bits (63), Expect = 6.3
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +2
Query: 92 LFTDRQSSKRGRKDLFVTSRIVMINLRGTGVNREVSTTEY 211
LF D SS+ RKD+++T I+ I G G + + +Y
Sbjct: 259 LFVDLGSSEL-RKDIYITVHIIRIGRMGAGEKKNACSVQY 297
>BC117688-1|AAI17689.1| 1966|Homo sapiens dedicator of cytokinesis 4
protein.
Length = 1966
Score = 29.5 bits (63), Expect = 6.3
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +2
Query: 92 LFTDRQSSKRGRKDLFVTSRIVMINLRGTGVNREVSTTEY 211
LF D SS+ RKD+++T I+ I G G + + +Y
Sbjct: 259 LFVDLGSSEL-RKDIYITVHIIRIGRMGAGEKKNACSVQY 297
>BC010577-1|AAH10577.1| 593|Homo sapiens granulin protein.
Length = 593
Score = 29.5 bits (63), Expect = 6.3
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = -1
Query: 391 SRRRHVRFPRSISCSASSGSPVRERCGPRLYENRWVAC 278
+RR + PR I C + PV + C P L W C
Sbjct: 431 ARRASLSHPRDIGCDQHTSCPVGQTCCPSL-GGSWACC 467
>AY233380-1|AAO73565.1| 1966|Homo sapiens DOCK4 protein.
Length = 1966
Score = 29.5 bits (63), Expect = 6.3
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +2
Query: 92 LFTDRQSSKRGRKDLFVTSRIVMINLRGTGVNREVSTTEY 211
LF D SS+ RKD+++T I+ I G G + + +Y
Sbjct: 259 LFVDLGSSEL-RKDIYITVHIIRIGRMGAGEKKNACSVQY 297
>AY124489-1|AAM94026.1| 593|Homo sapiens PC cell-derived growth
factor protein.
Length = 593
Score = 29.5 bits (63), Expect = 6.3
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = -1
Query: 391 SRRRHVRFPRSISCSASSGSPVRERCGPRLYENRWVAC 278
+RR + PR I C + PV + C P L W C
Sbjct: 431 ARRASLSHPRDIGCDQHTSCPVGQTCCPSL-GGSWACC 467
>AK222522-1|BAD96242.1| 593|Homo sapiens granulin variant protein.
Length = 593
Score = 29.5 bits (63), Expect = 6.3
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = -1
Query: 391 SRRRHVRFPRSISCSASSGSPVRERCGPRLYENRWVAC 278
+RR + PR I C + PV + C P L W C
Sbjct: 431 ARRASLSHPRDIGCDQHTSCPVGQTCCPSL-GGSWACC 467
>AK023348-1|BAB14535.1| 413|Homo sapiens protein ( Homo sapiens
cDNA FLJ13286 fis, clone OVARC1001154, highly similar to
Homo sapiens clone 24720 epithelin 1 and 2 mRNA. ).
Length = 413
Score = 29.5 bits (63), Expect = 6.3
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = -1
Query: 391 SRRRHVRFPRSISCSASSGSPVRERCGPRLYENRWVAC 278
+RR + PR I C + PV + C P L W C
Sbjct: 251 ARRASLSHPRDIGCDQHTSCPVGQTCCPSL-GGSWACC 287
>AF055008-1|AAC09359.1| 593|Homo sapiens epithelin 1 and 2 protein.
Length = 593
Score = 29.5 bits (63), Expect = 6.3
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = -1
Query: 391 SRRRHVRFPRSISCSASSGSPVRERCGPRLYENRWVAC 278
+RR + PR I C + PV + C P L W C
Sbjct: 431 ARRASLSHPRDIGCDQHTSCPVGQTCCPSL-GGSWACC 467
>D86981-1|BAA13217.1| 681|Homo sapiens KIAA0228 protein protein.
Length = 681
Score = 29.1 bits (62), Expect = 8.3
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +1
Query: 274 RHMLPSGFRKVLVHNVRELEILMMQNRKYCAEIAHGVSSKKRKAI 408
RH+L F+ ++ H V+ +L + C+ IA ++ K KAI
Sbjct: 172 RHLLHHCFQALMDHGVKVASVLAYSFSRRCSYIAESDAAVKEKAI 216
>BC018121-1|AAH18121.1| 585|Homo sapiens amyloid beta precursor
protein (cytoplasmic tail) binding protein 2 protein.
Length = 585
Score = 29.1 bits (62), Expect = 8.3
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +1
Query: 274 RHMLPSGFRKVLVHNVRELEILMMQNRKYCAEIAHGVSSKKRKAI 408
RH+L F+ ++ H V+ +L + C+ IA ++ K KAI
Sbjct: 76 RHLLHHCFQALMDHGVKVASVLAYSFSRRCSYIAESDAAVKEKAI 120
>AF017782-1|AAC83973.1| 585|Homo sapiens PAT1 protein.
Length = 585
Score = 29.1 bits (62), Expect = 8.3
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +1
Query: 274 RHMLPSGFRKVLVHNVRELEILMMQNRKYCAEIAHGVSSKKRKAI 408
RH+L F+ ++ H V+ +L + C+ IA ++ K KAI
Sbjct: 76 RHLLHHCFQALMDHGVKVASVLAYSFSRRCSYIAESDAAVKEKAI 120
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,572,639
Number of Sequences: 237096
Number of extensions: 1563793
Number of successful extensions: 3455
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 3374
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3455
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4213781852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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