Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_A07
         (326 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   1.9  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    21   2.5  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   2.5  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       21   4.3  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    20   7.6  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    20   7.6  

>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.8 bits (44), Expect = 1.9
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 150 TFLESLLNTCQQWYHD 197
           TF++S LN  Q+W  D
Sbjct: 124 TFIKSALNLVQKWGFD 139


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.4 bits (43), Expect = 2.5
 Identities = 6/18 (33%), Positives = 10/18 (55%)
 Frame = -1

Query: 275 HLQQEREERHQPRPTAAH 222
           H+Q++  + HQP     H
Sbjct: 170 HMQEQHPQHHQPHHQQQH 187


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.4 bits (43), Expect = 2.5
 Identities = 6/18 (33%), Positives = 10/18 (55%)
 Frame = -1

Query: 275 HLQQEREERHQPRPTAAH 222
           H+Q++  + HQP     H
Sbjct: 172 HMQEQHPQHHQPHHQQQH 189


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 20.6 bits (41), Expect = 4.3
 Identities = 8/30 (26%), Positives = 14/30 (46%)
 Frame = -1

Query: 113 PRGRQRVPRRLDGARHEVPHRVHQRTSAHS 24
           P   Q +PR  +    ++ H +HQ    H+
Sbjct: 25  PASVQPLPRHFNPPSDKLHHPIHQTVIYHN 54


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 19.8 bits (39), Expect = 7.6
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -1

Query: 113 PRGRQRVPRRLDGARHEVPH 54
           P+  Q  PR+     HE PH
Sbjct: 101 PQPSQHCPRKHGYFAHEEPH 120


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 19.8 bits (39), Expect = 7.6
 Identities = 11/34 (32%), Positives = 14/34 (41%)
 Frame = +3

Query: 162 SLLNTCQQWYHDREKLLGTMVGGGRPRLMAFLSF 263
           S++NTC Q   + E    T      P L  F  F
Sbjct: 330 SIVNTCSQIPSEVEDKYTTYFLNTYPHLFNFFEF 363


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,781
Number of Sequences: 336
Number of extensions: 955
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6261139
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)