BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= S06A01NCLL0001_A07 (326 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_32309| Best HMM Match : C1_3 (HMM E-Value=7.3) 30 0.51 SB_50468| Best HMM Match : Kazal_1 (HMM E-Value=1.3e-15) 29 0.68 SB_35197| Best HMM Match : SAP (HMM E-Value=3.2) 28 1.6 SB_12582| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.7 SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27) 27 3.6 SB_21035| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.6 SB_1555| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.8 SB_25790| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 6.3 >SB_32309| Best HMM Match : C1_3 (HMM E-Value=7.3) Length = 193 Score = 29.9 bits (64), Expect = 0.51 Identities = 22/68 (32%), Positives = 36/68 (52%) Frame = +3 Query: 9 LEDPNAVCARTLMDAVGHLVSRAVESPRYALPAARRCIAVVEREQTETFLESLLNTCQQW 188 LE AV A+ + +L ++A++ AL RR + VE +TE L+ + NTC + Sbjct: 25 LERQAAVSAK--VSGAAYLHTKALKLQLAALHGLRRLCSQVEVGETE--LDRVCNTCTLY 80 Query: 189 YHDREKLL 212 DR+ L+ Sbjct: 81 LSDRQPLV 88 >SB_50468| Best HMM Match : Kazal_1 (HMM E-Value=1.3e-15) Length = 1724 Score = 29.5 bits (63), Expect = 0.68 Identities = 14/56 (25%), Positives = 27/56 (48%) Frame = +3 Query: 3 TRLEDPNAVCARTLMDAVGHLVSRAVESPRYALPAARRCIAVVEREQTETFLESLL 170 T++ +A+ MD H + + A+PA +A+V + +T+TF S + Sbjct: 950 TKISVDDAITEHVTMDVYAHPAFHPRDPYKSAVPAVAFTLALVNKHKTDTFRASFM 1005 >SB_35197| Best HMM Match : SAP (HMM E-Value=3.2) Length = 323 Score = 28.3 bits (60), Expect = 1.6 Identities = 10/45 (22%), Positives = 26/45 (57%) Frame = -2 Query: 208 NFSLSWYHCWHVLSKDSRKVSVCSRSTTAMQRRAAGSAYRGDSTA 74 N +++ HCW +L+++S + + ++++ AA S+ S++ Sbjct: 161 NCAMTCQHCWRILARNSTVIIIIIITSSSSSSAAAASSSSSSSSS 205 >SB_12582| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 303 Score = 27.5 bits (58), Expect = 2.7 Identities = 11/43 (25%), Positives = 24/43 (55%) Frame = +3 Query: 84 SPRYALPAARRCIAVVEREQTETFLESLLNTCQQWYHDREKLL 212 SP+ +P R C ++E++ET + ++ Q H R++++ Sbjct: 91 SPQINVPYERHCFRQTKQEESETVDQIVIRPSQMAEHIRDQMI 133 >SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27) Length = 5087 Score = 27.1 bits (57), Expect = 3.6 Identities = 14/46 (30%), Positives = 24/46 (52%) Frame = +3 Query: 150 TFLESLLNTCQQWYHDREKLLGTMVGGGRPRLMAFLSFLLEMYCQL 287 T ++ + +YHDREKL+ T + + + A +S E+ QL Sbjct: 4897 TLYQTQRTALKAYYHDREKLI-TQISNEKGEMQAKISQFQELVKQL 4941 >SB_21035| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 183 Score = 27.1 bits (57), Expect = 3.6 Identities = 12/46 (26%), Positives = 17/46 (36%) Frame = +3 Query: 171 NTCQQWYHDREKLLGTMVGGGRPRLMAFLSFLLEMYCQLRRRTIQR 308 N C +W+ L + G R LSF +C +R R Sbjct: 25 NWCSKWWSGNRFSLSQLARGARMSRYGLLSFTSARFCNRKREGFMR 70 >SB_1555| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 346 Score = 26.6 bits (56), Expect = 4.8 Identities = 9/17 (52%), Positives = 11/17 (64%) Frame = +3 Query: 147 ETFLESLLNTCQQWYHD 197 +TF LL C+ WYHD Sbjct: 39 KTFYVLLLRACELWYHD 55 >SB_25790| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 122 Score = 26.2 bits (55), Expect = 6.3 Identities = 11/28 (39%), Positives = 14/28 (50%) Frame = +3 Query: 228 GGRPRLMAFLSFLLEMYCQLRRRTIQRR 311 G RP L + E YC R RTI+ + Sbjct: 62 GNRPHLQGYFYDFTESYCNERGRTIRSK 89 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 8,020,456 Number of Sequences: 59808 Number of extensions: 127692 Number of successful extensions: 393 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 373 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 392 length of database: 16,821,457 effective HSP length: 72 effective length of database: 12,515,281 effective search space used: 450550116 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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