Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_A07
(326 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g27150.1 68415.m03263 aldehyde oxidase 3 (AAO3) identical to ... 29 0.97
At1g04580.1 68414.m00451 aldehyde oxidase, putative similar to a... 29 0.97
At4g04400.1 68417.m00634 hypothetical protein contains Pfam prof... 28 1.3
At3g45380.1 68416.m04899 hypothetical protein contains Pfam prof... 28 1.3
At4g09390.1 68417.m01548 hypothetical protein various predicted ... 27 2.2
At5g23910.1 68418.m02808 kinesin motor protein-related 27 3.0
At4g37130.1 68417.m05258 hydroxyproline-rich glycoprotein family... 27 3.0
At2g39850.1 68415.m04894 subtilase family protein contains simil... 27 3.9
At3g27290.1 68416.m03411 F-box family protein-related contains w... 26 5.2
At2g05260.1 68415.m00554 lipase class 3 family protein contains ... 26 5.2
At1g30800.1 68414.m03766 expressed protein ; expression supporte... 26 6.8
At5g27860.1 68418.m03342 expressed protein 25 9.0
At1g51680.2 68414.m05823 4-coumarate--CoA ligase 1 / 4-coumaroyl... 25 9.0
At1g51680.1 68414.m05822 4-coumarate--CoA ligase 1 / 4-coumaroyl... 25 9.0
>At2g27150.1 68415.m03263 aldehyde oxidase 3 (AAO3) identical to
GP:3172044:gnl:PID:d1029570:AB010080
Length = 1332
Score = 28.7 bits (61), Expect = 0.97
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = +3
Query: 96 ALPAARRCIAVVEREQTETFLESLLNTCQQWYHDREKLLGTMVGGG 233
ALP C+ V Q ++ S++ TC +++ VGGG
Sbjct: 754 ALPDEDNCVKVFSSSQAPEYVHSVIATCLGIQEHNVRVITRRVGGG 799
>At1g04580.1 68414.m00451 aldehyde oxidase, putative similar to
aldehyde oxidases from Arabidopsis thaliana: GI:3172023,
GI:3172025, GI:3172044; identical to cDNA putative
aldehyde oxidase (AO2) mRNA, partial cds GI:2792305
Length = 1337
Score = 28.7 bits (61), Expect = 0.97
Identities = 19/71 (26%), Positives = 30/71 (42%)
Frame = +3
Query: 96 ALPAARRCIAVVEREQTETFLESLLNTCQQWYHDREKLLGTMVGGGRPRLMAFLSFLLEM 275
ALP C+ V Q F ++++ TC +++ VGGG A S +
Sbjct: 756 ALPDEDNCLVVYSSTQAPEFTQTVIATCLGIPEHNVRVITRRVGGGFGG-KAIKSMPVAT 814
Query: 276 YCQLRRRTIQR 308
C L + +QR
Sbjct: 815 ACALAAKKMQR 825
>At4g04400.1 68417.m00634 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 735
Score = 28.3 bits (60), Expect = 1.3
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +3
Query: 66 VSRAVESPRYALPAARRCIAVVEREQTETFLESLLNTCQQWYHD 197
+ +A+E PR A+ + A +E +QT T L+ L++ Q + +
Sbjct: 92 IEKAMEEPRVGDEASPKGTAEIEEDQTGTTLKPLIDAVIQQFEE 135
>At3g45380.1 68416.m04899 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 690
Score = 28.3 bits (60), Expect = 1.3
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +3
Query: 66 VSRAVESPRYALPAARRCIAVVEREQTETFLESLLNTCQQWYHD 197
+ +A+E PR A+ + A +E +QT T L+ L++ Q + +
Sbjct: 92 IEKAMEEPRVGDEASPKGTAEIEEDQTGTTLKPLIDAVIQQFEE 135
>At4g09390.1 68417.m01548 hypothetical protein various predicted
proteins -Arabidopsis thaliana
Length = 220
Score = 27.5 bits (58), Expect = 2.2
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +3
Query: 66 VSRAVESPRYALPAARRCIAVVEREQTETFLESLLNTCQQWYHD 197
+ +A+E PR A+ + A +E +QT T L+ L++ Q + +
Sbjct: 116 IEKAMEEPRDGDEASPKGTAEIEEDQTGTSLKPLIDAVIQQFEE 159
>At5g23910.1 68418.m02808 kinesin motor protein-related
Length = 665
Score = 27.1 bits (57), Expect = 3.0
Identities = 14/54 (25%), Positives = 27/54 (50%)
Frame = -2
Query: 169 SKDSRKVSVCSRSTTAMQRRAAGSAYRGDSTARDTRCPTASISVRAHTAFGSSS 8
SK +R + C + + + RG+ T R T+ TA+ +++A FG ++
Sbjct: 261 SKLTRMLKDCLKGSNITLLITCLTVLRGNVTERKTKINTATSAIKARKLFGEAN 314
>At4g37130.1 68417.m05258 hydroxyproline-rich glycoprotein family
protein
Length = 513
Score = 27.1 bits (57), Expect = 3.0
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 141 QTETFLESLLNTCQQWYHDREKLL 212
QT E LN C+QW + E+LL
Sbjct: 264 QTVVRFEKYLNECRQWVEELEQLL 287
>At2g39850.1 68415.m04894 subtilase family protein contains
similarity to subtilisin-like protease C1 GI:13325079
from [Glycine max]
Length = 774
Score = 26.6 bits (56), Expect = 3.9
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 217 VPNNFSLSWYHCWHVLSKDSRKVSVC 140
VPN + CW V+ K+ R+ SVC
Sbjct: 225 VPNAKIAVYKTCWRVIRKNGREDSVC 250
>At3g27290.1 68416.m03411 F-box family protein-related contains weak
similarity to PPA [Mus musculus] GP|18568225|gb|AAL75967
Length = 382
Score = 26.2 bits (55), Expect = 5.2
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +3
Query: 156 LESLLNTCQQWYHDREKLLGTM 221
+ S LNT W+H+ +K +G +
Sbjct: 75 VRSTLNTISDWFHENQKEIGVV 96
>At2g05260.1 68415.m00554 lipase class 3 family protein contains
Pfam profile PF01764: Lipase
Length = 358
Score = 26.2 bits (55), Expect = 5.2
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = +3
Query: 42 LMDAVGHLVSRAVESPRYALPAARRCIAVVEREQTETFLESLLNTCQQWYHDREKLL 212
LMDA+G + VE P + +P+A +V + +E + ++ + QW+ D + L+
Sbjct: 300 LMDAMGVSNAVEVEEPVHVIPSAN---LIVNKTISEDYKDA--HGIHQWWRDDQDLV 351
>At1g30800.1 68414.m03766 expressed protein ; expression supported
by MPSS
Length = 239
Score = 25.8 bits (54), Expect = 6.8
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -1
Query: 92 PRRLDGARHEVPHRVHQRTSAHSVRIFKP 6
PRRL A H VP QR S +R+FKP
Sbjct: 98 PRRLSVAYHIVP----QRLSFTDLRLFKP 122
>At5g27860.1 68418.m03342 expressed protein
Length = 177
Score = 25.4 bits (53), Expect = 9.0
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -2
Query: 166 KDSRKVSVCSRSTTAMQRRAAGSAYRGDSTARDT 65
+DS KV SRST+ +RR S+ DS+ D+
Sbjct: 36 RDSLKVRKKSRSTSKKRRRRQHSSDSSDSSYSDS 69
>At1g51680.2 68414.m05823 4-coumarate--CoA ligase 1 /
4-coumaroyl-CoA synthase 1 (4CL1) identical to SP|Q42524
4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1)
(4-coumaroyl-CoA synthase 1) {Arabidopsis thaliana}
Length = 490
Score = 25.4 bits (53), Expect = 9.0
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -2
Query: 271 SNRNERNAISRGRPPPTIVPNNFSLSWY 188
SN N + I R + P +PN+ SL Y
Sbjct: 16 SNNNNSDVIFRSKLPDIYIPNHLSLHDY 43
>At1g51680.1 68414.m05822 4-coumarate--CoA ligase 1 /
4-coumaroyl-CoA synthase 1 (4CL1) identical to SP|Q42524
4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1)
(4-coumaroyl-CoA synthase 1) {Arabidopsis thaliana}
Length = 561
Score = 25.4 bits (53), Expect = 9.0
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -2
Query: 271 SNRNERNAISRGRPPPTIVPNNFSLSWY 188
SN N + I R + P +PN+ SL Y
Sbjct: 16 SNNNNSDVIFRSKLPDIYIPNHLSLHDY 43
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,336,949
Number of Sequences: 28952
Number of extensions: 81713
Number of successful extensions: 353
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 348
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 353
length of database: 12,070,560
effective HSP length: 71
effective length of database: 10,014,968
effective search space used: 370553816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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