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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_A06
         (511 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0177 + 20669053-20669055,20669150-20669198,20669680-206699...   151   2e-37
04_03_0970 + 21338072-21338074,21338192-21338240,21338688-213389...   149   1e-36
01_07_0270 - 42417782-42417850,42418207-42418342,42418826-424191...   149   1e-36
03_01_0474 + 3646724-3646789,3648952-3649067,3649547-3649595,364...    31   0.71 
01_07_0054 - 40779336-40779599,40779734-40779848,40779998-407801...    31   0.71 
05_03_0634 + 16432679-16433076,16433358-16433610,16433993-164342...    30   1.2  
02_05_0308 - 27754340-27754634,27755591-27755696,27755781-277558...    30   1.2  
03_03_0217 + 15500943-15502196                                         29   1.6  
03_06_0519 - 34481751-34482722                                         29   2.2  
08_02_0824 + 21561699-21562415,21563294-21563362,21563424-215634...    29   2.9  
01_07_0081 - 40959279-40959375,40959463-40959589,40960138-409603...    29   2.9  
04_03_0718 + 19005460-19005767,19005854-19006370                       28   3.8  
05_07_0310 + 29135875-29136052,29136206-29136617,29136723-291368...    28   5.0  
04_04_0674 + 27173948-27174188,27174704-27175260,27175310-271753...    28   5.0  
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332...    28   5.0  
06_03_0948 - 26252230-26252460,26252567-26252614,26252703-262530...    27   6.6  
02_01_0462 + 3332464-3332470,3333606-3335806                           27   6.6  
01_03_0106 - 12607995-12608327,12608863-12609063                       27   6.6  
01_01_0475 + 3500385-3500880,3501078-3501154,3501851-3502019,350...    27   6.6  
07_03_1410 + 26363538-26363777,26365421-26365475,26365553-263656...    27   8.8  
06_02_0046 + 10928708-10928798,10929997-10930077,10930567-109306...    27   8.8  
05_06_0277 + 26885621-26886064,26886148-26886317,26887038-268879...    27   8.8  
05_03_0373 - 13194723-13195847,13196219-13196809                       27   8.8  
04_01_0330 - 4369326-4370852                                           27   8.8  
01_06_1249 - 35714645-35716003,35716700-35716761,35717007-357171...    27   8.8  

>02_04_0177 +
           20669053-20669055,20669150-20669198,20669680-20669962,
           20670526-20670661,20671014-20671094
          Length = 183

 Score =  151 bits (367), Expect = 2e-37
 Identities = 84/169 (49%), Positives = 109/169 (64%), Gaps = 15/169 (8%)
 Frame = +2

Query: 35  MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDLEKIPNLQVIKAMQSLKSRGYVKEQF 214
           M++PK+NR  I +YLF+EGV+ AKKDY+  KHP ++ +PNLQVIK MQS KS+ YV+E F
Sbjct: 1   MIIPKKNRNEICKYLFQEGVLYAKKDYNLAKHPQID-VPNLQVIKLMQSFKSKEYVRETF 59

Query: 215 AWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRT--ETVRRGAVG-RPDAPARTAE 385
           +W+++YWYLTN+GIE+LR +L+LP EIVPATLK+S R        G  G RP  P R   
Sbjct: 60  SWQYYYWYLTNDGIEHLRNYLNLPSEIVPATLKKSARPPGRPFGSGPPGDRPRGPPRFEG 119

Query: 386 DRSAY-----RRAPPAGAPHDKKADVGPGSADVE--FRG-----GFGRG 496
           DR  +      R  P GAP D   + G   A+ +  FR      GFGRG
Sbjct: 120 DRPRFGDRDGYRGGPRGAPGDFGGEKGGAPAEFQPSFRSSGGRPGFGRG 168


>04_03_0970 +
           21338072-21338074,21338192-21338240,21338688-21338970,
           21339570-21339705,21339761-21339769
          Length = 159

 Score =  149 bits (362), Expect = 1e-36
 Identities = 80/159 (50%), Positives = 104/159 (65%), Gaps = 8/159 (5%)
 Frame = +2

Query: 35  MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDLEKIPNLQVIKAMQSLKSRGYVKEQF 214
           M++PK+NR  I +YLF+EGV+ AKKDY+  KHP ++ +PNLQVIK MQS KS+ YV+E F
Sbjct: 1   MIIPKKNRNEICKYLFQEGVLYAKKDYNLAKHPQID-VPNLQVIKLMQSFKSKEYVRETF 59

Query: 215 AWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRT--ETVRRGAVG-RPDAPARTAE 385
           +W+++YWYLTN+GIE+LR +L+LP EIVPATLK+S R        G  G RP  P R   
Sbjct: 60  SWQYYYWYLTNDGIEHLRNYLNLPSEIVPATLKKSARPPGRPFGSGPPGDRPRGPPRFEG 119

Query: 386 DRSAY-----RRAPPAGAPHDKKADVGPGSADVEFRGGF 487
           DR  +      R  P GAP D   +   G A  EF+  F
Sbjct: 120 DRPRFGDRDGYRGGPRGAPGDFGGE--KGGAPAEFQPSF 156


>01_07_0270 -
           42417782-42417850,42418207-42418342,42418826-42419108,
           42419459-42419507,42419614-42419616
          Length = 179

 Score =  149 bits (361), Expect = 1e-36
 Identities = 81/167 (48%), Positives = 108/167 (64%), Gaps = 13/167 (7%)
 Frame = +2

Query: 35  MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDLEKIPNLQVIKAMQSLKSRGYVKEQF 214
           M++ K+NR  I +YLF EGV+ AKKDY+  KHP ++ +PNL+VIK MQS KS+ YV+E F
Sbjct: 1   MIISKKNRREICKYLFHEGVLYAKKDYNLAKHPKVD-VPNLEVIKLMQSFKSKEYVRETF 59

Query: 215 AWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVR--TETVRRGAVG-RPDAPARTAE 385
           +W+H+YWYLTN+GIE+LR +L+LP E+VP TLK+S +  +     G  G RP  P R   
Sbjct: 60  SWQHYYWYLTNDGIEHLRSYLNLPSEVVPNTLKKSAKPPSRPFGSGPPGDRPRGPPRFEG 119

Query: 386 DRSAY-----RRAPPAGAPHDKKADVGPGSADVE--FRG---GFGRG 496
           DR  +      R  P GAP D   + G   A+ +  FRG   GFGRG
Sbjct: 120 DRPRFGDRDGYRGGPRGAPGDFGGEKGGAPAEFQPSFRGSRPGFGRG 166


>03_01_0474 +
           3646724-3646789,3648952-3649067,3649547-3649595,
           3649641-3649697,3649743-3650993
          Length = 512

 Score = 30.7 bits (66), Expect = 0.71
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = -2

Query: 372 AGASGLPTAPRRTVSVRTDLFRVAGTISGGKCRKI 268
           A A G P  P   + VR  L+    T  GG CR +
Sbjct: 3   AAAGGAPPRPAAGIRVRVPLYMTGQTYQGGSCRGV 37


>01_07_0054 -
           40779336-40779599,40779734-40779848,40779998-40780181,
           40780322-40780393,40780485-40780611,40780830-40781011,
           40781099-40781249
          Length = 364

 Score = 30.7 bits (66), Expect = 0.71
 Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
 Frame = +2

Query: 65  IYEYLFKEGVMVA-KKDYHAPKHPDLEKIPNLQVIKAMQSLKSRGYVKEQFAWRHFYWYL 241
           +Y+ L ++G +VA KK +  P H  + ++  L  I+    +   GY +E       Y Y+
Sbjct: 84  VYKGLLQDGTIVAIKKRHSPPSHEFIHEVNYLSSIRHRNLVNLLGYCQENGMQMLVYEYV 143

Query: 242 TNEGIE-YLRIFLHLP 286
            N  +  +L    H P
Sbjct: 144 PNGSVSTHLHGSSHAP 159


>05_03_0634 +
           16432679-16433076,16433358-16433610,16433993-16434291,
           16434553-16434729,16435001-16435621,16435690-16435784,
           16436000-16436088,16436185-16436250,16436475-16437026,
           16437879-16437953,16438305-16438375,16438456-16438513,
           16441506-16442048
          Length = 1098

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 8/83 (9%)
 Frame = +2

Query: 164 IKAMQSLKSRGYVKEQFAWRH---FYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTET 334
           I +   L S G       WR    F+ YLT E I YL   +HL  +   +T  RS+  + 
Sbjct: 605 ISSNAQLDSPGSANSSPFWRQVEPFFSYLTTEDIAYLSQQIHLSDD---STASRSIEGDE 661

Query: 335 VR--RGA---VGRPDAPARTAED 388
            R  +G+   + +P  PA + +D
Sbjct: 662 SRKYKGSLEYISQPSTPAGSNKD 684


>02_05_0308 -
           27754340-27754634,27755591-27755696,27755781-27755855,
           27756039-27757410
          Length = 615

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 5/54 (9%)
 Frame = -2

Query: 495 PLPKPPLNSTSAEPGP-----TSAFLSXXXXXXXXXXXADLSSAVRAGASGLPT 349
           PLP+PP   TSA P P      +  L+             LS+++ A A  LPT
Sbjct: 3   PLPRPPPTPTSAAPAPCPRQIAAVVLNHPSSALTPASTRSLSASLLAVAPSLPT 56


>03_03_0217 + 15500943-15502196
          Length = 417

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 7/78 (8%)
 Frame = +2

Query: 296 VPATLKRSVRTETVRRGAVGRPDAPARTAEDR--SAYRRAPPAGAPHDK-----KADVGP 454
           +P  LKR +    + R +V    APA  +  R  SA  R   A  P  +     +A  GP
Sbjct: 262 LPERLKREIEEAKLLRRSVSAVTAPAAASSGRWASAASRTMSAARPSRRWSALLRALSGP 321

Query: 455 GSADVEFRGGFGRGRSAP 508
             +D++  GG GR R AP
Sbjct: 322 RYSDMDGGGGGGR-RVAP 338


>03_06_0519 - 34481751-34482722
          Length = 323

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +2

Query: 338 RRGAVGRPDAPARTAEDRSAYRRAPP-AGAPHDKKADVGPGSAD 466
           R+G  G    PA ++   +  RR+   AGAP D  A+ GP S +
Sbjct: 23  RKGKRGAEAPPATSSSTPTTARRSKRLAGAPPDHPAEAGPSSTN 66


>08_02_0824 +
           21561699-21562415,21563294-21563362,21563424-21563459,
           21564533-21564600,21565259-21565277,21565662-21565763,
           21566173-21566288,21566501-21566595,21568093-21568264,
           21568413-21568493,21569732-21569801,21570106-21570132
          Length = 523

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 19/73 (26%), Positives = 27/73 (36%)
 Frame = +2

Query: 284 PPEIVPATLKRSVRTETVRRGAVGRPDAPARTAEDRSAYRRAPPAGAPHDKKADVGPGSA 463
           PPE     L+ +      RRG   +P  P   A +  +   +PPA      +      + 
Sbjct: 100 PPEAASEALRGAASPPERRRGGDRQPSHPTEAASEAPSGSASPPARRRGGDQQPPPAVAV 159

Query: 464 DVEFRGGFGRGRS 502
            V   GG G  RS
Sbjct: 160 AVTSEGGVGPRRS 172


>01_07_0081 -
           40959279-40959375,40959463-40959589,40960138-40960339,
           40962414-40963361
          Length = 457

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
 Frame = -2

Query: 504 ADRPLPKPPLNSTSAEPGPTSAFLSXX-XXXXXXXXXADLSSAVRAGASGLPTA 346
           +D P P PP+  T  EP P     S             D SS+V + +S  PTA
Sbjct: 19  SDDPPPPPPVTETKPEPEPPLPTTSIDPTPSGDEESGDDSSSSVSSASSTSPTA 72


>04_03_0718 + 19005460-19005767,19005854-19006370
          Length = 274

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 24/83 (28%), Positives = 34/83 (40%), Gaps = 2/83 (2%)
 Frame = +2

Query: 203 KEQFAWRHFYWYLTNEGIEYL--RIFLHLPPEIVPATLKRSVRTETVRRGAVGRPDAPAR 376
           +E  AW  F  YL    + Y    + + L P+ +P + ++  R          R +  A 
Sbjct: 201 QEAVAWMWFGRYLAVANLVYFSTNLLVFLIPKFLPRSFEKYFRM---------RDEVYAE 251

Query: 377 TAEDRSAYRRAPPAGAPHDKKAD 445
           TAEDR A      A     KKAD
Sbjct: 252 TAEDRHAAAATVAAKPVESKKAD 274


>05_07_0310 +
           29135875-29136052,29136206-29136617,29136723-29136867,
           29137944-29138102,29138183-29138242,29138349-29138546
          Length = 383

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 17/44 (38%), Positives = 18/44 (40%)
 Frame = +2

Query: 368 PARTAEDRSAYRRAPPAGAPHDKKADVGPGSADVEFRGGFGRGR 499
           P + A    A R A   GAP D     GPG      RGG G  R
Sbjct: 50  PTKPAPPAQAVREARNYGAPRDGAGRGGPGRGRGGGRGGRGGPR 93


>04_04_0674 +
           27173948-27174188,27174704-27175260,27175310-27175399,
           27175475-27175714,27175801-27176022,27176124-27176433,
           27176528-27176847,27176906-27177021,27177133-27177227,
           27177331-27177407,27177520-27177615
          Length = 787

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 17/46 (36%), Positives = 20/46 (43%)
 Frame = +2

Query: 281 LPPEIVPATLKRSVRTETVRRGAVGRPDAPARTAEDRSAYRRAPPA 418
           LPP +    LKR V     RR  +  PD   R      +Y R PPA
Sbjct: 510 LPPPVRSRPLKRPVDIRD-RRPVMSIPDRVRRLPPPERSYDRRPPA 554


>01_01_0446 +
           3321832-3322232,3322398-3322455,3322810-3323748,
           3324504-3324654,3324740-3324818,3325826-3325934
          Length = 578

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +2

Query: 407 APPAGAPHDKKADVGPGSADVEFRGGFGRGRSAP 508
           APP   P+   A  G GS    + GG+G GR  P
Sbjct: 356 APPPNPPYSGGAPGGQGSLPPSYDGGYG-GRPMP 388


>06_03_0948 -
           26252230-26252460,26252567-26252614,26252703-26253041,
           26253132-26253260,26255404-26255967
          Length = 436

 Score = 27.5 bits (58), Expect = 6.6
 Identities = 17/55 (30%), Positives = 30/55 (54%)
 Frame = +3

Query: 336 YVVVQLAGLMLQHEQLKIDQLIGAHHQLELLMIRRLMSALVQLMLNLEEVSEEVD 500
           ++  Q A L ++   L +D+L      L L  +RRL S LV L   +++V +E++
Sbjct: 184 FLDAQAAELEIEAYPL-LDELTSKISTLNLERVRRLKSRLVALTRRVQKVRDEIE 237


>02_01_0462 + 3332464-3332470,3333606-3335806
          Length = 735

 Score = 27.5 bits (58), Expect = 6.6
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +3

Query: 183 LNLEDMLRNSSHGGIFTGI*QMRVLNTLEFSCTYLL 290
           L   +M RN  +GGI   I  + V+ +L+ SC  LL
Sbjct: 575 LQFLNMSRNVLYGGIPNDIGHLHVVESLDLSCNRLL 610


>01_03_0106 - 12607995-12608327,12608863-12609063
          Length = 177

 Score = 27.5 bits (58), Expect = 6.6
 Identities = 18/34 (52%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
 Frame = +2

Query: 404 RAPPAGAPHDKKADVGPGS--ADVEFRGGFGRGR 499
           R PP  A  D  AD G GS  AD +  GG GRGR
Sbjct: 141 RQPPCSA--DADADEGGGSVDADEDGDGGRGRGR 172


>01_01_0475 +
           3500385-3500880,3501078-3501154,3501851-3502019,
           3502385-3502473,3502601-3502765,3502841-3502918,
           3503087-3503190,3503317-3503422
          Length = 427

 Score = 27.5 bits (58), Expect = 6.6
 Identities = 18/60 (30%), Positives = 21/60 (35%)
 Frame = +2

Query: 299 PATLKRSVRTETVRRGAVGRPDAPARTAEDRSAYRRAPPAGAPHDKKADVGPGSADVEFR 478
           PA    + R   V   A     AP     + S   RA P G PH      G G  +V  R
Sbjct: 19  PAAAAAAGRRYGVHFSASSFIQAPLSALLEYSGILRADPGGGPHQVGGGGGGGGGEVSIR 78


>07_03_1410 +
           26363538-26363777,26365421-26365475,26365553-26365644,
           26365732-26365787,26366026-26366101,26366790-26366856,
           26367197-26367263,26368276-26368342,26368759-26368842,
           26369749-26369904,26370641-26370718,26371323-26371391,
           26371476-26371541,26371623-26371751,26372862-26372951,
           26373306-26373371,26373768-26373836,26373903-26374007,
           26374374-26374499,26374687-26374745,26374832-26374868,
           26375370-26375519
          Length = 667

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +2

Query: 53  NRVSIYEYLFKEGVMVAKKDYHAPKHPDLEKIP 151
           ++VS++ +L   GV+ AK  YH      + KIP
Sbjct: 107 SKVSVHLFLHSTGVIAAKFQYHQKLVDAVHKIP 139


>06_02_0046 +
           10928708-10928798,10929997-10930077,10930567-10930685,
           10931275-10931894,10931992-10933184,10933280-10933359,
           10933751-10933846,10933931-10934004,10936007-10936151,
           10936323-10936487
          Length = 887

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +3

Query: 354 AGLMLQHEQLKIDQLIGAHHQLELLMIRRLMSALVQLMLNLEEVSEEVDL 503
           AG +  HE + ID L  A +  ELL   + +  L   + N+E +  E+++
Sbjct: 272 AGAVTSHESMDIDPLQLARYGEELLQRLKPLERLHGSIYNVELLKREIEI 321


>05_06_0277 +
           26885621-26886064,26886148-26886317,26887038-26887941,
           26888544-26888575,26888862-26888928,26889116-26889173,
           26889329-26889421,26890366-26890480,26890847-26890894,
           26891012-26891057,26891161-26891231,26891865-26891870,
           26891991-26892038,26892439-26892488,26892892-26893154
          Length = 804

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 20/48 (41%), Positives = 23/48 (47%)
 Frame = +2

Query: 311 KRSVRTETVRRGAVGRPDAPARTAEDRSAYRRAPPAGAPHDKKADVGP 454
           +R +   T R GAV  P  PA    D  A +R  PAG   D  A VGP
Sbjct: 74  RRKLPLATGRDGAVAGP--PADPVPD--ARQRRVPAGGGADPAAGVGP 117


>05_03_0373 - 13194723-13195847,13196219-13196809
          Length = 571

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = +2

Query: 293 IVPATLKRSVRTETVRRGAVGRPDAPARTAEDRSAYRRAPPAGA 424
           ++   +  +   E +RR + GR    +R A++    RRA PAGA
Sbjct: 43  LISGAVSAAEPNERIRRSS-GRYIVASRRADEEDGLRRAVPAGA 85


>04_01_0330 - 4369326-4370852
          Length = 508

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = +2

Query: 401 RRAPPAGAPHDKKADVGPGSADVEFRGGFG 490
           RR P  G  HD   D   G+AD +  GG G
Sbjct: 446 RRTPSYGHDHDDDDDNYDGNADADDNGGGG 475


>01_06_1249 -
           35714645-35716003,35716700-35716761,35717007-35717181,
           35717276-35717301,35717917-35717983,35719803-35719945,
           35720337-35720349
          Length = 614

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 15/31 (48%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
 Frame = +2

Query: 344 GAVGRPDAPARTAEDRSAYRRAPP-AGAPHD 433
           G  GR     R A D  A RR  P  GAPHD
Sbjct: 105 GEAGRAGLRRRQAVDEVAARREEPQGGAPHD 135


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,861,680
Number of Sequences: 37544
Number of extensions: 277194
Number of successful extensions: 1149
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1145
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1095026320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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