BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= S06A01NCLL0001_A06 (511 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 02_04_0177 + 20669053-20669055,20669150-20669198,20669680-206699... 151 2e-37 04_03_0970 + 21338072-21338074,21338192-21338240,21338688-213389... 149 1e-36 01_07_0270 - 42417782-42417850,42418207-42418342,42418826-424191... 149 1e-36 03_01_0474 + 3646724-3646789,3648952-3649067,3649547-3649595,364... 31 0.71 01_07_0054 - 40779336-40779599,40779734-40779848,40779998-407801... 31 0.71 05_03_0634 + 16432679-16433076,16433358-16433610,16433993-164342... 30 1.2 02_05_0308 - 27754340-27754634,27755591-27755696,27755781-277558... 30 1.2 03_03_0217 + 15500943-15502196 29 1.6 03_06_0519 - 34481751-34482722 29 2.2 08_02_0824 + 21561699-21562415,21563294-21563362,21563424-215634... 29 2.9 01_07_0081 - 40959279-40959375,40959463-40959589,40960138-409603... 29 2.9 04_03_0718 + 19005460-19005767,19005854-19006370 28 3.8 05_07_0310 + 29135875-29136052,29136206-29136617,29136723-291368... 28 5.0 04_04_0674 + 27173948-27174188,27174704-27175260,27175310-271753... 28 5.0 01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332... 28 5.0 06_03_0948 - 26252230-26252460,26252567-26252614,26252703-262530... 27 6.6 02_01_0462 + 3332464-3332470,3333606-3335806 27 6.6 01_03_0106 - 12607995-12608327,12608863-12609063 27 6.6 01_01_0475 + 3500385-3500880,3501078-3501154,3501851-3502019,350... 27 6.6 07_03_1410 + 26363538-26363777,26365421-26365475,26365553-263656... 27 8.8 06_02_0046 + 10928708-10928798,10929997-10930077,10930567-109306... 27 8.8 05_06_0277 + 26885621-26886064,26886148-26886317,26887038-268879... 27 8.8 05_03_0373 - 13194723-13195847,13196219-13196809 27 8.8 04_01_0330 - 4369326-4370852 27 8.8 01_06_1249 - 35714645-35716003,35716700-35716761,35717007-357171... 27 8.8 >02_04_0177 + 20669053-20669055,20669150-20669198,20669680-20669962, 20670526-20670661,20671014-20671094 Length = 183 Score = 151 bits (367), Expect = 2e-37 Identities = 84/169 (49%), Positives = 109/169 (64%), Gaps = 15/169 (8%) Frame = +2 Query: 35 MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDLEKIPNLQVIKAMQSLKSRGYVKEQF 214 M++PK+NR I +YLF+EGV+ AKKDY+ KHP ++ +PNLQVIK MQS KS+ YV+E F Sbjct: 1 MIIPKKNRNEICKYLFQEGVLYAKKDYNLAKHPQID-VPNLQVIKLMQSFKSKEYVRETF 59 Query: 215 AWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRT--ETVRRGAVG-RPDAPARTAE 385 +W+++YWYLTN+GIE+LR +L+LP EIVPATLK+S R G G RP P R Sbjct: 60 SWQYYYWYLTNDGIEHLRNYLNLPSEIVPATLKKSARPPGRPFGSGPPGDRPRGPPRFEG 119 Query: 386 DRSAY-----RRAPPAGAPHDKKADVGPGSADVE--FRG-----GFGRG 496 DR + R P GAP D + G A+ + FR GFGRG Sbjct: 120 DRPRFGDRDGYRGGPRGAPGDFGGEKGGAPAEFQPSFRSSGGRPGFGRG 168 >04_03_0970 + 21338072-21338074,21338192-21338240,21338688-21338970, 21339570-21339705,21339761-21339769 Length = 159 Score = 149 bits (362), Expect = 1e-36 Identities = 80/159 (50%), Positives = 104/159 (65%), Gaps = 8/159 (5%) Frame = +2 Query: 35 MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDLEKIPNLQVIKAMQSLKSRGYVKEQF 214 M++PK+NR I +YLF+EGV+ AKKDY+ KHP ++ +PNLQVIK MQS KS+ YV+E F Sbjct: 1 MIIPKKNRNEICKYLFQEGVLYAKKDYNLAKHPQID-VPNLQVIKLMQSFKSKEYVRETF 59 Query: 215 AWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRT--ETVRRGAVG-RPDAPARTAE 385 +W+++YWYLTN+GIE+LR +L+LP EIVPATLK+S R G G RP P R Sbjct: 60 SWQYYYWYLTNDGIEHLRNYLNLPSEIVPATLKKSARPPGRPFGSGPPGDRPRGPPRFEG 119 Query: 386 DRSAY-----RRAPPAGAPHDKKADVGPGSADVEFRGGF 487 DR + R P GAP D + G A EF+ F Sbjct: 120 DRPRFGDRDGYRGGPRGAPGDFGGE--KGGAPAEFQPSF 156 >01_07_0270 - 42417782-42417850,42418207-42418342,42418826-42419108, 42419459-42419507,42419614-42419616 Length = 179 Score = 149 bits (361), Expect = 1e-36 Identities = 81/167 (48%), Positives = 108/167 (64%), Gaps = 13/167 (7%) Frame = +2 Query: 35 MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDLEKIPNLQVIKAMQSLKSRGYVKEQF 214 M++ K+NR I +YLF EGV+ AKKDY+ KHP ++ +PNL+VIK MQS KS+ YV+E F Sbjct: 1 MIISKKNRREICKYLFHEGVLYAKKDYNLAKHPKVD-VPNLEVIKLMQSFKSKEYVRETF 59 Query: 215 AWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVR--TETVRRGAVG-RPDAPARTAE 385 +W+H+YWYLTN+GIE+LR +L+LP E+VP TLK+S + + G G RP P R Sbjct: 60 SWQHYYWYLTNDGIEHLRSYLNLPSEVVPNTLKKSAKPPSRPFGSGPPGDRPRGPPRFEG 119 Query: 386 DRSAY-----RRAPPAGAPHDKKADVGPGSADVE--FRG---GFGRG 496 DR + R P GAP D + G A+ + FRG GFGRG Sbjct: 120 DRPRFGDRDGYRGGPRGAPGDFGGEKGGAPAEFQPSFRGSRPGFGRG 166 >03_01_0474 + 3646724-3646789,3648952-3649067,3649547-3649595, 3649641-3649697,3649743-3650993 Length = 512 Score = 30.7 bits (66), Expect = 0.71 Identities = 13/35 (37%), Positives = 16/35 (45%) Frame = -2 Query: 372 AGASGLPTAPRRTVSVRTDLFRVAGTISGGKCRKI 268 A A G P P + VR L+ T GG CR + Sbjct: 3 AAAGGAPPRPAAGIRVRVPLYMTGQTYQGGSCRGV 37 >01_07_0054 - 40779336-40779599,40779734-40779848,40779998-40780181, 40780322-40780393,40780485-40780611,40780830-40781011, 40781099-40781249 Length = 364 Score = 30.7 bits (66), Expect = 0.71 Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%) Frame = +2 Query: 65 IYEYLFKEGVMVA-KKDYHAPKHPDLEKIPNLQVIKAMQSLKSRGYVKEQFAWRHFYWYL 241 +Y+ L ++G +VA KK + P H + ++ L I+ + GY +E Y Y+ Sbjct: 84 VYKGLLQDGTIVAIKKRHSPPSHEFIHEVNYLSSIRHRNLVNLLGYCQENGMQMLVYEYV 143 Query: 242 TNEGIE-YLRIFLHLP 286 N + +L H P Sbjct: 144 PNGSVSTHLHGSSHAP 159 >05_03_0634 + 16432679-16433076,16433358-16433610,16433993-16434291, 16434553-16434729,16435001-16435621,16435690-16435784, 16436000-16436088,16436185-16436250,16436475-16437026, 16437879-16437953,16438305-16438375,16438456-16438513, 16441506-16442048 Length = 1098 Score = 29.9 bits (64), Expect = 1.2 Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 8/83 (9%) Frame = +2 Query: 164 IKAMQSLKSRGYVKEQFAWRH---FYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTET 334 I + L S G WR F+ YLT E I YL +HL + +T RS+ + Sbjct: 605 ISSNAQLDSPGSANSSPFWRQVEPFFSYLTTEDIAYLSQQIHLSDD---STASRSIEGDE 661 Query: 335 VR--RGA---VGRPDAPARTAED 388 R +G+ + +P PA + +D Sbjct: 662 SRKYKGSLEYISQPSTPAGSNKD 684 >02_05_0308 - 27754340-27754634,27755591-27755696,27755781-27755855, 27756039-27757410 Length = 615 Score = 29.9 bits (64), Expect = 1.2 Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 5/54 (9%) Frame = -2 Query: 495 PLPKPPLNSTSAEPGP-----TSAFLSXXXXXXXXXXXADLSSAVRAGASGLPT 349 PLP+PP TSA P P + L+ LS+++ A A LPT Sbjct: 3 PLPRPPPTPTSAAPAPCPRQIAAVVLNHPSSALTPASTRSLSASLLAVAPSLPT 56 >03_03_0217 + 15500943-15502196 Length = 417 Score = 29.5 bits (63), Expect = 1.6 Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 7/78 (8%) Frame = +2 Query: 296 VPATLKRSVRTETVRRGAVGRPDAPARTAEDR--SAYRRAPPAGAPHDK-----KADVGP 454 +P LKR + + R +V APA + R SA R A P + +A GP Sbjct: 262 LPERLKREIEEAKLLRRSVSAVTAPAAASSGRWASAASRTMSAARPSRRWSALLRALSGP 321 Query: 455 GSADVEFRGGFGRGRSAP 508 +D++ GG GR R AP Sbjct: 322 RYSDMDGGGGGGR-RVAP 338 >03_06_0519 - 34481751-34482722 Length = 323 Score = 29.1 bits (62), Expect = 2.2 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%) Frame = +2 Query: 338 RRGAVGRPDAPARTAEDRSAYRRAPP-AGAPHDKKADVGPGSAD 466 R+G G PA ++ + RR+ AGAP D A+ GP S + Sbjct: 23 RKGKRGAEAPPATSSSTPTTARRSKRLAGAPPDHPAEAGPSSTN 66 >08_02_0824 + 21561699-21562415,21563294-21563362,21563424-21563459, 21564533-21564600,21565259-21565277,21565662-21565763, 21566173-21566288,21566501-21566595,21568093-21568264, 21568413-21568493,21569732-21569801,21570106-21570132 Length = 523 Score = 28.7 bits (61), Expect = 2.9 Identities = 19/73 (26%), Positives = 27/73 (36%) Frame = +2 Query: 284 PPEIVPATLKRSVRTETVRRGAVGRPDAPARTAEDRSAYRRAPPAGAPHDKKADVGPGSA 463 PPE L+ + RRG +P P A + + +PPA + + Sbjct: 100 PPEAASEALRGAASPPERRRGGDRQPSHPTEAASEAPSGSASPPARRRGGDQQPPPAVAV 159 Query: 464 DVEFRGGFGRGRS 502 V GG G RS Sbjct: 160 AVTSEGGVGPRRS 172 >01_07_0081 - 40959279-40959375,40959463-40959589,40960138-40960339, 40962414-40963361 Length = 457 Score = 28.7 bits (61), Expect = 2.9 Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 1/54 (1%) Frame = -2 Query: 504 ADRPLPKPPLNSTSAEPGPTSAFLSXX-XXXXXXXXXADLSSAVRAGASGLPTA 346 +D P P PP+ T EP P S D SS+V + +S PTA Sbjct: 19 SDDPPPPPPVTETKPEPEPPLPTTSIDPTPSGDEESGDDSSSSVSSASSTSPTA 72 >04_03_0718 + 19005460-19005767,19005854-19006370 Length = 274 Score = 28.3 bits (60), Expect = 3.8 Identities = 24/83 (28%), Positives = 34/83 (40%), Gaps = 2/83 (2%) Frame = +2 Query: 203 KEQFAWRHFYWYLTNEGIEYL--RIFLHLPPEIVPATLKRSVRTETVRRGAVGRPDAPAR 376 +E AW F YL + Y + + L P+ +P + ++ R R + A Sbjct: 201 QEAVAWMWFGRYLAVANLVYFSTNLLVFLIPKFLPRSFEKYFRM---------RDEVYAE 251 Query: 377 TAEDRSAYRRAPPAGAPHDKKAD 445 TAEDR A A KKAD Sbjct: 252 TAEDRHAAAATVAAKPVESKKAD 274 >05_07_0310 + 29135875-29136052,29136206-29136617,29136723-29136867, 29137944-29138102,29138183-29138242,29138349-29138546 Length = 383 Score = 27.9 bits (59), Expect = 5.0 Identities = 17/44 (38%), Positives = 18/44 (40%) Frame = +2 Query: 368 PARTAEDRSAYRRAPPAGAPHDKKADVGPGSADVEFRGGFGRGR 499 P + A A R A GAP D GPG RGG G R Sbjct: 50 PTKPAPPAQAVREARNYGAPRDGAGRGGPGRGRGGGRGGRGGPR 93 >04_04_0674 + 27173948-27174188,27174704-27175260,27175310-27175399, 27175475-27175714,27175801-27176022,27176124-27176433, 27176528-27176847,27176906-27177021,27177133-27177227, 27177331-27177407,27177520-27177615 Length = 787 Score = 27.9 bits (59), Expect = 5.0 Identities = 17/46 (36%), Positives = 20/46 (43%) Frame = +2 Query: 281 LPPEIVPATLKRSVRTETVRRGAVGRPDAPARTAEDRSAYRRAPPA 418 LPP + LKR V RR + PD R +Y R PPA Sbjct: 510 LPPPVRSRPLKRPVDIRD-RRPVMSIPDRVRRLPPPERSYDRRPPA 554 >01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748, 3324504-3324654,3324740-3324818,3325826-3325934 Length = 578 Score = 27.9 bits (59), Expect = 5.0 Identities = 14/34 (41%), Positives = 17/34 (50%) Frame = +2 Query: 407 APPAGAPHDKKADVGPGSADVEFRGGFGRGRSAP 508 APP P+ A G GS + GG+G GR P Sbjct: 356 APPPNPPYSGGAPGGQGSLPPSYDGGYG-GRPMP 388 >06_03_0948 - 26252230-26252460,26252567-26252614,26252703-26253041, 26253132-26253260,26255404-26255967 Length = 436 Score = 27.5 bits (58), Expect = 6.6 Identities = 17/55 (30%), Positives = 30/55 (54%) Frame = +3 Query: 336 YVVVQLAGLMLQHEQLKIDQLIGAHHQLELLMIRRLMSALVQLMLNLEEVSEEVD 500 ++ Q A L ++ L +D+L L L +RRL S LV L +++V +E++ Sbjct: 184 FLDAQAAELEIEAYPL-LDELTSKISTLNLERVRRLKSRLVALTRRVQKVRDEIE 237 >02_01_0462 + 3332464-3332470,3333606-3335806 Length = 735 Score = 27.5 bits (58), Expect = 6.6 Identities = 14/36 (38%), Positives = 20/36 (55%) Frame = +3 Query: 183 LNLEDMLRNSSHGGIFTGI*QMRVLNTLEFSCTYLL 290 L +M RN +GGI I + V+ +L+ SC LL Sbjct: 575 LQFLNMSRNVLYGGIPNDIGHLHVVESLDLSCNRLL 610 >01_03_0106 - 12607995-12608327,12608863-12609063 Length = 177 Score = 27.5 bits (58), Expect = 6.6 Identities = 18/34 (52%), Positives = 19/34 (55%), Gaps = 2/34 (5%) Frame = +2 Query: 404 RAPPAGAPHDKKADVGPGS--ADVEFRGGFGRGR 499 R PP A D AD G GS AD + GG GRGR Sbjct: 141 RQPPCSA--DADADEGGGSVDADEDGDGGRGRGR 172 >01_01_0475 + 3500385-3500880,3501078-3501154,3501851-3502019, 3502385-3502473,3502601-3502765,3502841-3502918, 3503087-3503190,3503317-3503422 Length = 427 Score = 27.5 bits (58), Expect = 6.6 Identities = 18/60 (30%), Positives = 21/60 (35%) Frame = +2 Query: 299 PATLKRSVRTETVRRGAVGRPDAPARTAEDRSAYRRAPPAGAPHDKKADVGPGSADVEFR 478 PA + R V A AP + S RA P G PH G G +V R Sbjct: 19 PAAAAAAGRRYGVHFSASSFIQAPLSALLEYSGILRADPGGGPHQVGGGGGGGGGEVSIR 78 >07_03_1410 + 26363538-26363777,26365421-26365475,26365553-26365644, 26365732-26365787,26366026-26366101,26366790-26366856, 26367197-26367263,26368276-26368342,26368759-26368842, 26369749-26369904,26370641-26370718,26371323-26371391, 26371476-26371541,26371623-26371751,26372862-26372951, 26373306-26373371,26373768-26373836,26373903-26374007, 26374374-26374499,26374687-26374745,26374832-26374868, 26375370-26375519 Length = 667 Score = 27.1 bits (57), Expect = 8.8 Identities = 12/33 (36%), Positives = 19/33 (57%) Frame = +2 Query: 53 NRVSIYEYLFKEGVMVAKKDYHAPKHPDLEKIP 151 ++VS++ +L GV+ AK YH + KIP Sbjct: 107 SKVSVHLFLHSTGVIAAKFQYHQKLVDAVHKIP 139 >06_02_0046 + 10928708-10928798,10929997-10930077,10930567-10930685, 10931275-10931894,10931992-10933184,10933280-10933359, 10933751-10933846,10933931-10934004,10936007-10936151, 10936323-10936487 Length = 887 Score = 27.1 bits (57), Expect = 8.8 Identities = 15/50 (30%), Positives = 26/50 (52%) Frame = +3 Query: 354 AGLMLQHEQLKIDQLIGAHHQLELLMIRRLMSALVQLMLNLEEVSEEVDL 503 AG + HE + ID L A + ELL + + L + N+E + E+++ Sbjct: 272 AGAVTSHESMDIDPLQLARYGEELLQRLKPLERLHGSIYNVELLKREIEI 321 >05_06_0277 + 26885621-26886064,26886148-26886317,26887038-26887941, 26888544-26888575,26888862-26888928,26889116-26889173, 26889329-26889421,26890366-26890480,26890847-26890894, 26891012-26891057,26891161-26891231,26891865-26891870, 26891991-26892038,26892439-26892488,26892892-26893154 Length = 804 Score = 27.1 bits (57), Expect = 8.8 Identities = 20/48 (41%), Positives = 23/48 (47%) Frame = +2 Query: 311 KRSVRTETVRRGAVGRPDAPARTAEDRSAYRRAPPAGAPHDKKADVGP 454 +R + T R GAV P PA D A +R PAG D A VGP Sbjct: 74 RRKLPLATGRDGAVAGP--PADPVPD--ARQRRVPAGGGADPAAGVGP 117 >05_03_0373 - 13194723-13195847,13196219-13196809 Length = 571 Score = 27.1 bits (57), Expect = 8.8 Identities = 14/44 (31%), Positives = 23/44 (52%) Frame = +2 Query: 293 IVPATLKRSVRTETVRRGAVGRPDAPARTAEDRSAYRRAPPAGA 424 ++ + + E +RR + GR +R A++ RRA PAGA Sbjct: 43 LISGAVSAAEPNERIRRSS-GRYIVASRRADEEDGLRRAVPAGA 85 >04_01_0330 - 4369326-4370852 Length = 508 Score = 27.1 bits (57), Expect = 8.8 Identities = 13/30 (43%), Positives = 15/30 (50%) Frame = +2 Query: 401 RRAPPAGAPHDKKADVGPGSADVEFRGGFG 490 RR P G HD D G+AD + GG G Sbjct: 446 RRTPSYGHDHDDDDDNYDGNADADDNGGGG 475 >01_06_1249 - 35714645-35716003,35716700-35716761,35717007-35717181, 35717276-35717301,35717917-35717983,35719803-35719945, 35720337-35720349 Length = 614 Score = 27.1 bits (57), Expect = 8.8 Identities = 15/31 (48%), Positives = 15/31 (48%), Gaps = 1/31 (3%) Frame = +2 Query: 344 GAVGRPDAPARTAEDRSAYRRAPP-AGAPHD 433 G GR R A D A RR P GAPHD Sbjct: 105 GEAGRAGLRRRQAVDEVAARREEPQGGAPHD 135 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,861,680 Number of Sequences: 37544 Number of extensions: 277194 Number of successful extensions: 1149 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 1111 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1145 length of database: 14,793,348 effective HSP length: 77 effective length of database: 11,902,460 effective search space used: 1095026320 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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