BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= S06A01NCLL0001_A06 (511 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY070896-1|AAL48518.1| 160|Drosophila melanogaster LP04958p pro... 244 5e-65 AE014298-2882|AAN09507.1| 160|Drosophila melanogaster CG14206-P... 244 5e-65 AE014298-2881|AAF48978.2| 160|Drosophila melanogaster CG14206-P... 244 5e-65 AE014297-4155|AAF56731.1| 163|Drosophila melanogaster CG12275-P... 206 2e-53 AF145693-1|AAD38668.2| 162|Drosophila melanogaster LD32148p pro... 204 7e-53 AY118800-1|AAM50660.1| 255|Drosophila melanogaster GH19623p pro... 32 0.52 AE013599-635|AAF59104.2| 255|Drosophila melanogaster CG30362-PA... 32 0.52 DQ228799-1|ABB54752.1| 1715|Drosophila melanogaster Dicer-2 prot... 29 4.8 DQ228798-1|ABB54751.1| 1715|Drosophila melanogaster Dicer-2 prot... 29 4.8 DQ228797-1|ABB54750.1| 1715|Drosophila melanogaster Dicer-2 prot... 29 4.8 DQ228796-1|ABB54749.1| 1715|Drosophila melanogaster Dicer-2 prot... 29 4.8 DQ228795-1|ABB54748.1| 1715|Drosophila melanogaster Dicer-2 prot... 29 4.8 DQ228794-1|ABB54747.1| 1715|Drosophila melanogaster Dicer-2 prot... 29 4.8 DQ228793-1|ABB54746.1| 1715|Drosophila melanogaster Dicer-2 prot... 29 4.8 DQ228792-1|ABB54745.1| 1715|Drosophila melanogaster Dicer-2 prot... 29 4.8 BT011073-1|AAR82738.1| 1640|Drosophila melanogaster SD11113p pro... 29 4.8 AE013599-2513|AAF57830.2| 1722|Drosophila melanogaster CG6493-PA... 29 4.8 AB073024-1|BAB69959.1| 1722|Drosophila melanogaster double-stran... 29 4.8 BT011391-1|AAR96183.1| 374|Drosophila melanogaster AT28259p pro... 28 6.4 BT025806-1|ABF85706.1| 620|Drosophila melanogaster IP01548p pro... 28 8.4 BT010033-1|AAQ22502.1| 1180|Drosophila melanogaster LP05937p pro... 28 8.4 AE014297-4482|AAF56970.1| 1275|Drosophila melanogaster CG7875-PA... 28 8.4 AE014297-1132|AAS65135.1| 1180|Drosophila melanogaster CG11870-P... 28 8.4 AE014297-1131|AAS65134.1| 1427|Drosophila melanogaster CG11870-P... 28 8.4 AE014297-1130|AAF54517.3| 1427|Drosophila melanogaster CG11870-P... 28 8.4 AE014297-1129|AAF54516.3| 1427|Drosophila melanogaster CG11870-P... 28 8.4 >AY070896-1|AAL48518.1| 160|Drosophila melanogaster LP04958p protein. Length = 160 Score = 244 bits (597), Expect = 5e-65 Identities = 118/158 (74%), Positives = 132/158 (83%), Gaps = 4/158 (2%) Frame = +2 Query: 35 MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDLEKIPNLQVIKAMQSLKSRGYVKEQF 214 M MPK +RV+IYEYLFKEGV+VAKKD+HA KHP+LE IPNL VIKAMQSL SRG VKEQF Sbjct: 1 MFMPKAHRVAIYEYLFKEGVIVAKKDFHAQKHPELESIPNLHVIKAMQSLHSRGLVKEQF 60 Query: 215 AWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVR-RGAVGRPDAP---ARTA 382 AWRH+YWYLTNEGIE LR +LHLPPEIVP+TLKR R+ETVR R AVG P P ++T Sbjct: 61 AWRHYYWYLTNEGIEELRSYLHLPPEIVPSTLKRPARSETVRPRPAVGGPRGPGDASKTG 120 Query: 383 EDRSAYRRAPPAGAPHDKKADVGPGSADVEFRGGFGRG 496 EDRSAYRRA P G+ DKK DVGPG+ +VEFRGGFGRG Sbjct: 121 EDRSAYRRA-PGGSGVDKKGDVGPGAGEVEFRGGFGRG 157 >AE014298-2882|AAN09507.1| 160|Drosophila melanogaster CG14206-PC, isoform C protein. Length = 160 Score = 244 bits (597), Expect = 5e-65 Identities = 118/158 (74%), Positives = 132/158 (83%), Gaps = 4/158 (2%) Frame = +2 Query: 35 MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDLEKIPNLQVIKAMQSLKSRGYVKEQF 214 M MPK +RV+IYEYLFKEGV+VAKKD+HA KHP+LE IPNL VIKAMQSL SRG VKEQF Sbjct: 1 MFMPKAHRVAIYEYLFKEGVIVAKKDFHAQKHPELESIPNLHVIKAMQSLHSRGLVKEQF 60 Query: 215 AWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVR-RGAVGRPDAP---ARTA 382 AWRH+YWYLTNEGIE LR +LHLPPEIVP+TLKR R+ETVR R AVG P P ++T Sbjct: 61 AWRHYYWYLTNEGIEELRSYLHLPPEIVPSTLKRPARSETVRPRPAVGGPRGPGDASKTG 120 Query: 383 EDRSAYRRAPPAGAPHDKKADVGPGSADVEFRGGFGRG 496 EDRSAYRRA P G+ DKK DVGPG+ +VEFRGGFGRG Sbjct: 121 EDRSAYRRA-PGGSGVDKKGDVGPGAGEVEFRGGFGRG 157 >AE014298-2881|AAF48978.2| 160|Drosophila melanogaster CG14206-PB, isoform B protein. Length = 160 Score = 244 bits (597), Expect = 5e-65 Identities = 118/158 (74%), Positives = 132/158 (83%), Gaps = 4/158 (2%) Frame = +2 Query: 35 MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDLEKIPNLQVIKAMQSLKSRGYVKEQF 214 M MPK +RV+IYEYLFKEGV+VAKKD+HA KHP+LE IPNL VIKAMQSL SRG VKEQF Sbjct: 1 MFMPKAHRVAIYEYLFKEGVIVAKKDFHAQKHPELESIPNLHVIKAMQSLHSRGLVKEQF 60 Query: 215 AWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVR-RGAVGRPDAP---ARTA 382 AWRH+YWYLTNEGIE LR +LHLPPEIVP+TLKR R+ETVR R AVG P P ++T Sbjct: 61 AWRHYYWYLTNEGIEELRSYLHLPPEIVPSTLKRPARSETVRPRPAVGGPRGPGDASKTG 120 Query: 383 EDRSAYRRAPPAGAPHDKKADVGPGSADVEFRGGFGRG 496 EDRSAYRRA P G+ DKK DVGPG+ +VEFRGGFGRG Sbjct: 121 EDRSAYRRA-PGGSGVDKKGDVGPGAGEVEFRGGFGRG 157 >AE014297-4155|AAF56731.1| 163|Drosophila melanogaster CG12275-PA protein. Length = 163 Score = 206 bits (502), Expect = 2e-53 Identities = 103/158 (65%), Positives = 119/158 (75%), Gaps = 5/158 (3%) Frame = +2 Query: 35 MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDLEKIPNLQVIKAMQSLKSRGYVKEQF 214 M +PK NRV+IYEYLFKEGV+VAKKD KH +L+KIPNLQVIK MQSL SRG+VKEQF Sbjct: 1 MFIPKANRVAIYEYLFKEGVLVAKKDSPIQKHSELDKIPNLQVIKVMQSLNSRGWVKEQF 60 Query: 215 AWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVR-RGAVGRP----DAPART 379 AWRHFYW LTNEGIE LR +LHLPPEIVP+TL ++ R+ VR RG G P ++T Sbjct: 61 AWRHFYWLLTNEGIEELRRYLHLPPEIVPSTLTQTTRSNAVRPRGGPGGPGGGFGGASKT 120 Query: 380 AEDRSAYRRAPPAGAPHDKKADVGPGSADVEFRGGFGR 493 +DRS YRR P A DKK DVG G+ VE+RGGFGR Sbjct: 121 DDDRSNYRRGPGAYG-MDKKGDVGAGTGRVEYRGGFGR 157 >AF145693-1|AAD38668.2| 162|Drosophila melanogaster LD32148p protein. Length = 162 Score = 204 bits (497), Expect = 7e-53 Identities = 102/156 (65%), Positives = 118/156 (75%), Gaps = 5/156 (3%) Frame = +2 Query: 41 MPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDLEKIPNLQVIKAMQSLKSRGYVKEQFAW 220 +PK NRV+IYEYLFKEGV+VAKKD KH +L+KIPNLQVIK MQSL SRG+VKEQFAW Sbjct: 2 IPKANRVAIYEYLFKEGVLVAKKDSPIQKHSELDKIPNLQVIKVMQSLNSRGWVKEQFAW 61 Query: 221 RHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVR-RGAVGRP----DAPARTAE 385 RHFYW LTNEGIE LR +LHLPPEIVP+TL ++ R+ VR RG G P ++T + Sbjct: 62 RHFYWLLTNEGIEELRRYLHLPPEIVPSTLTQTTRSNAVRPRGGPGGPGGGFGGASKTDD 121 Query: 386 DRSAYRRAPPAGAPHDKKADVGPGSADVEFRGGFGR 493 DRS YRR P A DKK DVG G+ VE+RGGFGR Sbjct: 122 DRSNYRRGPGAYG-MDKKGDVGAGTGRVEYRGGFGR 156 >AY118800-1|AAM50660.1| 255|Drosophila melanogaster GH19623p protein. Length = 255 Score = 31.9 bits (69), Expect = 0.52 Identities = 10/30 (33%), Positives = 19/30 (63%) Frame = -2 Query: 282 KCRKILRYSIPSFVKYQ*KCLHANCSLTYP 193 KCR +++P+F+ + +CL C++ YP Sbjct: 76 KCRSDPEFNVPAFIDSRKRCLSDRCAMAYP 105 >AE013599-635|AAF59104.2| 255|Drosophila melanogaster CG30362-PA protein. Length = 255 Score = 31.9 bits (69), Expect = 0.52 Identities = 10/30 (33%), Positives = 19/30 (63%) Frame = -2 Query: 282 KCRKILRYSIPSFVKYQ*KCLHANCSLTYP 193 KCR +++P+F+ + +CL C++ YP Sbjct: 76 KCRSDPEFNVPAFIDSRKRCLSDRCAMAYP 105 >DQ228799-1|ABB54752.1| 1715|Drosophila melanogaster Dicer-2 protein. Length = 1715 Score = 28.7 bits (61), Expect = 4.8 Identities = 12/36 (33%), Positives = 20/36 (55%) Frame = -1 Query: 238 IPVKMPPCELFLNISSRFK*LHSFDHLEVRDLLEIW 131 + V P E+ + S + + LH F + RD+L+IW Sbjct: 772 VRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIW 807 >DQ228798-1|ABB54751.1| 1715|Drosophila melanogaster Dicer-2 protein. Length = 1715 Score = 28.7 bits (61), Expect = 4.8 Identities = 12/36 (33%), Positives = 20/36 (55%) Frame = -1 Query: 238 IPVKMPPCELFLNISSRFK*LHSFDHLEVRDLLEIW 131 + V P E+ + S + + LH F + RD+L+IW Sbjct: 772 VRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIW 807 >DQ228797-1|ABB54750.1| 1715|Drosophila melanogaster Dicer-2 protein. Length = 1715 Score = 28.7 bits (61), Expect = 4.8 Identities = 12/36 (33%), Positives = 20/36 (55%) Frame = -1 Query: 238 IPVKMPPCELFLNISSRFK*LHSFDHLEVRDLLEIW 131 + V P E+ + S + + LH F + RD+L+IW Sbjct: 772 VRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIW 807 >DQ228796-1|ABB54749.1| 1715|Drosophila melanogaster Dicer-2 protein. Length = 1715 Score = 28.7 bits (61), Expect = 4.8 Identities = 12/36 (33%), Positives = 20/36 (55%) Frame = -1 Query: 238 IPVKMPPCELFLNISSRFK*LHSFDHLEVRDLLEIW 131 + V P E+ + S + + LH F + RD+L+IW Sbjct: 772 VRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIW 807 >DQ228795-1|ABB54748.1| 1715|Drosophila melanogaster Dicer-2 protein. Length = 1715 Score = 28.7 bits (61), Expect = 4.8 Identities = 12/36 (33%), Positives = 20/36 (55%) Frame = -1 Query: 238 IPVKMPPCELFLNISSRFK*LHSFDHLEVRDLLEIW 131 + V P E+ + S + + LH F + RD+L+IW Sbjct: 772 VRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIW 807 >DQ228794-1|ABB54747.1| 1715|Drosophila melanogaster Dicer-2 protein. Length = 1715 Score = 28.7 bits (61), Expect = 4.8 Identities = 12/36 (33%), Positives = 20/36 (55%) Frame = -1 Query: 238 IPVKMPPCELFLNISSRFK*LHSFDHLEVRDLLEIW 131 + V P E+ + S + + LH F + RD+L+IW Sbjct: 772 VRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIW 807 >DQ228793-1|ABB54746.1| 1715|Drosophila melanogaster Dicer-2 protein. Length = 1715 Score = 28.7 bits (61), Expect = 4.8 Identities = 12/36 (33%), Positives = 20/36 (55%) Frame = -1 Query: 238 IPVKMPPCELFLNISSRFK*LHSFDHLEVRDLLEIW 131 + V P E+ + S + + LH F + RD+L+IW Sbjct: 772 VRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIW 807 >DQ228792-1|ABB54745.1| 1715|Drosophila melanogaster Dicer-2 protein. Length = 1715 Score = 28.7 bits (61), Expect = 4.8 Identities = 12/36 (33%), Positives = 20/36 (55%) Frame = -1 Query: 238 IPVKMPPCELFLNISSRFK*LHSFDHLEVRDLLEIW 131 + V P E+ + S + + LH F + RD+L+IW Sbjct: 772 VRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIW 807 >BT011073-1|AAR82738.1| 1640|Drosophila melanogaster SD11113p protein. Length = 1640 Score = 28.7 bits (61), Expect = 4.8 Identities = 12/36 (33%), Positives = 20/36 (55%) Frame = -1 Query: 238 IPVKMPPCELFLNISSRFK*LHSFDHLEVRDLLEIW 131 + V P E+ + S + + LH F + RD+L+IW Sbjct: 758 VRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIW 793 >AE013599-2513|AAF57830.2| 1722|Drosophila melanogaster CG6493-PA protein. Length = 1722 Score = 28.7 bits (61), Expect = 4.8 Identities = 12/36 (33%), Positives = 20/36 (55%) Frame = -1 Query: 238 IPVKMPPCELFLNISSRFK*LHSFDHLEVRDLLEIW 131 + V P E+ + S + + LH F + RD+L+IW Sbjct: 779 VRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIW 814 >AB073024-1|BAB69959.1| 1722|Drosophila melanogaster double-strand-specific ribonucleaseprotein. Length = 1722 Score = 28.7 bits (61), Expect = 4.8 Identities = 12/36 (33%), Positives = 20/36 (55%) Frame = -1 Query: 238 IPVKMPPCELFLNISSRFK*LHSFDHLEVRDLLEIW 131 + V P E+ + S + + LH F + RD+L+IW Sbjct: 779 VRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIW 814 >BT011391-1|AAR96183.1| 374|Drosophila melanogaster AT28259p protein. Length = 374 Score = 28.3 bits (60), Expect = 6.4 Identities = 24/87 (27%), Positives = 33/87 (37%), Gaps = 5/87 (5%) Frame = +2 Query: 212 FAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVRRG--AVGRPDAPARTA- 382 F WR FY L E I L PP + K + + G + G+ A A A Sbjct: 77 FFWRTFYDKLIEEEITVLEEVPRPPPTVPDKKGKGKKKGDARMAGGKSAGKAGASAGAAG 136 Query: 383 --EDRSAYRRAPPAGAPHDKKADVGPG 457 ++ APPAG + +V G Sbjct: 137 KGRKKAGQDAAPPAGGDQEAVEEVNTG 163 >BT025806-1|ABF85706.1| 620|Drosophila melanogaster IP01548p protein. Length = 620 Score = 27.9 bits (59), Expect = 8.4 Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Frame = +2 Query: 293 IVPATLKRSVRTETVRRGAVGRPDAPARTAEDRSAYRRAPPAGAPHDKKADV-GPGSADV 469 + A L+ SV+ + GA G+P + +D+ A P D K GP D Sbjct: 319 LAAAALRASVKNVDEKSGADGKPGTMGKPTDDKKAGDDKDKQQPPKDSKPSAGGPKPGDQ 378 Query: 470 EFRGGFG 490 + G G Sbjct: 379 KPTPGAG 385 >BT010033-1|AAQ22502.1| 1180|Drosophila melanogaster LP05937p protein. Length = 1180 Score = 27.9 bits (59), Expect = 8.4 Identities = 15/45 (33%), Positives = 22/45 (48%) Frame = +2 Query: 332 TVRRGAVGRPDAPARTAEDRSAYRRAPPAGAPHDKKADVGPGSAD 466 T GA G +A A T D + A P+G P D+ ++ G A+ Sbjct: 9 TAPNGAAGGAEAAAPTGLDATGNSLAHPSGIPQDQIDNIMSGIAN 53 >AE014297-4482|AAF56970.1| 1275|Drosophila melanogaster CG7875-PA protein. Length = 1275 Score = 27.9 bits (59), Expect = 8.4 Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 1/67 (1%) Frame = +2 Query: 293 IVPATLKRSVRTETVRRGAVGRPDAPARTAEDRSAYRRAPPAGAPHDKKADV-GPGSADV 469 + A L+ SV+ + GA G+P + +D+ A P D K GP D Sbjct: 974 LAAAALRASVKNVDEKSGADGKPGTMGKPTDDKKAGDDKDKQQPPKDSKPSAGGPKPGDQ 1033 Query: 470 EFRGGFG 490 + G G Sbjct: 1034 KPTPGAG 1040 >AE014297-1132|AAS65135.1| 1180|Drosophila melanogaster CG11870-PD, isoform D protein. Length = 1180 Score = 27.9 bits (59), Expect = 8.4 Identities = 15/45 (33%), Positives = 22/45 (48%) Frame = +2 Query: 332 TVRRGAVGRPDAPARTAEDRSAYRRAPPAGAPHDKKADVGPGSAD 466 T GA G +A A T D + A P+G P D+ ++ G A+ Sbjct: 9 TAPNGAAGGAEAAAPTGLDATGNSLAHPSGIPQDQIDNIMSGIAN 53 >AE014297-1131|AAS65134.1| 1427|Drosophila melanogaster CG11870-PC, isoform C protein. Length = 1427 Score = 27.9 bits (59), Expect = 8.4 Identities = 15/45 (33%), Positives = 22/45 (48%) Frame = +2 Query: 332 TVRRGAVGRPDAPARTAEDRSAYRRAPPAGAPHDKKADVGPGSAD 466 T GA G +A A T D + A P+G P D+ ++ G A+ Sbjct: 9 TAPNGAAGGAEAAAPTGLDATGNSLAHPSGIPQDQIDNIMSGIAN 53 >AE014297-1130|AAF54517.3| 1427|Drosophila melanogaster CG11870-PB, isoform B protein. Length = 1427 Score = 27.9 bits (59), Expect = 8.4 Identities = 15/45 (33%), Positives = 22/45 (48%) Frame = +2 Query: 332 TVRRGAVGRPDAPARTAEDRSAYRRAPPAGAPHDKKADVGPGSAD 466 T GA G +A A T D + A P+G P D+ ++ G A+ Sbjct: 9 TAPNGAAGGAEAAAPTGLDATGNSLAHPSGIPQDQIDNIMSGIAN 53 >AE014297-1129|AAF54516.3| 1427|Drosophila melanogaster CG11870-PA, isoform A protein. Length = 1427 Score = 27.9 bits (59), Expect = 8.4 Identities = 15/45 (33%), Positives = 22/45 (48%) Frame = +2 Query: 332 TVRRGAVGRPDAPARTAEDRSAYRRAPPAGAPHDKKADVGPGSAD 466 T GA G +A A T D + A P+G P D+ ++ G A+ Sbjct: 9 TAPNGAAGGAEAAAPTGLDATGNSLAHPSGIPQDQIDNIMSGIAN 53 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 22,789,927 Number of Sequences: 53049 Number of extensions: 461894 Number of successful extensions: 1897 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 1814 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1887 length of database: 24,988,368 effective HSP length: 80 effective length of database: 20,744,448 effective search space used: 1846255872 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -