BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= S06A01NCLL0001_A05 (285 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPCC63.04 |mok14||alpha-1,3-glucan synthase Mok14|Schizosaccharo... 25 2.8 SPAC15E1.03 |rpl36a||60S ribosomal protein L36/L42|Schizosacchar... 25 2.8 SPAC32A11.01 |mug8||conserved fungal protein|Schizosaccharomyces... 24 4.9 SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 23 8.5 SPCC550.13 |dfp1|rad35, him1|Hsk1-Dfp1 kinase complex regulatory... 23 8.5 >SPCC63.04 |mok14||alpha-1,3-glucan synthase Mok14|Schizosaccharomyces pombe|chr 3|||Manual Length = 1369 Score = 24.6 bits (51), Expect = 2.8 Identities = 9/25 (36%), Positives = 14/25 (56%) Frame = -1 Query: 129 VLCSLF*TFNQNYWLQSSIKGYGRY 55 V+C L NQN+W+ + I R+ Sbjct: 1157 VICFLISVINQNFWMSTLISQAWRF 1181 >SPAC15E1.03 |rpl36a||60S ribosomal protein L36/L42|Schizosaccharomyces pombe|chr 1|||Manual Length = 106 Score = 24.6 bits (51), Expect = 2.8 Identities = 12/32 (37%), Positives = 20/32 (62%) Frame = -2 Query: 272 GAESDPHFKKKASDDATIAKITRKLIIRLVCM 177 G ++ P F KKA K+T+K+++RL C+ Sbjct: 51 GGQTKPVFHKKA-------KVTKKVVLRLECV 75 >SPAC32A11.01 |mug8||conserved fungal protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 720 Score = 23.8 bits (49), Expect = 4.9 Identities = 8/22 (36%), Positives = 13/22 (59%) Frame = -1 Query: 135 ICVLCSLF*TFNQNYWLQSSIK 70 IC L + TF+ +YW Q ++ Sbjct: 5 ICTLTCILPTFSMDYWNQECVE 26 >SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces pombe|chr 2|||Manual Length = 897 Score = 23.0 bits (47), Expect = 8.5 Identities = 9/20 (45%), Positives = 12/20 (60%) Frame = -3 Query: 100 SKLLAPIEYKGLWALHRNIR 41 SK +AP+ Y +WA N R Sbjct: 752 SKTVAPLRYVKIWANTENAR 771 >SPCC550.13 |dfp1|rad35, him1|Hsk1-Dfp1 kinase complex regulatory subunit Dfp1 |Schizosaccharomyces pombe|chr 3|||Manual Length = 545 Score = 23.0 bits (47), Expect = 8.5 Identities = 9/25 (36%), Positives = 14/25 (56%) Frame = -1 Query: 222 DRQDNQETHHSFSMHVHFTARNNNY 148 ++ DN E+H S H F N+N+ Sbjct: 504 EKFDNFESHIRSSRHRRFAENNDNF 528 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 1,185,200 Number of Sequences: 5004 Number of extensions: 19926 Number of successful extensions: 47 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 47 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 47 length of database: 2,362,478 effective HSP length: 62 effective length of database: 2,052,230 effective search space used: 65671360 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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