Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_A05
         (285 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-905|AAF46171.2| 3166|Drosophila melanogaster CG3950-PA ...    27   4.9  
AE013599-3539|AAF46953.3|  367|Drosophila melanogaster CG30189-P...    27   4.9  

>AE014298-905|AAF46171.2| 3166|Drosophila melanogaster CG3950-PA
            protein.
          Length = 3166

 Score = 26.6 bits (56), Expect = 4.9
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -3

Query: 277  TPELSPTPISKRRHQMTR 224
            TPE S TP +K+ HQM R
Sbjct: 1012 TPESSGTPANKKPHQMRR 1029


>AE013599-3539|AAF46953.3|  367|Drosophila melanogaster CG30189-PA
           protein.
          Length = 367

 Score = 26.6 bits (56), Expect = 4.9
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = -3

Query: 79  EYKGLWALHRNI 44
           E +GLWALHRN+
Sbjct: 213 ELRGLWALHRNL 224


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,922,803
Number of Sequences: 53049
Number of extensions: 222517
Number of successful extensions: 420
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 413
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 420
length of database: 24,988,368
effective HSP length: 72
effective length of database: 21,168,840
effective search space used: 465714480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)