Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_A04
         (409 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    22   2.0  
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    22   2.7  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    22   2.7  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    22   2.7  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   3.5  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   3.5  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 2.0
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +3

Query: 108 NINVSVTKSILLAALHNPAS 167
           N++V V  +ILL  L NP++
Sbjct: 667 NVSVDVRDNILLKNLQNPST 686


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 21.8 bits (44), Expect = 2.7
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -2

Query: 147 LPVKSTSLR*H*CFPGTA*NTKI 79
           +P  STS+R H C  G+A +T I
Sbjct: 200 IPPLSTSMRSHLCNWGSANSTNI 222


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 2.7
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -2

Query: 147 LPVKSTSLR*H*CFPGTA*NTKI 79
           +P  STS+R H C  G+A +T I
Sbjct: 360 IPPLSTSMRSHLCNWGSANSTNI 382


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 2.7
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -2

Query: 147 LPVKSTSLR*H*CFPGTA*NTKI 79
           +P  STS+R H C  G+A +T I
Sbjct: 360 IPPLSTSMRSHLCNWGSANSTNI 382


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 3.5
 Identities = 4/9 (44%), Positives = 8/9 (88%)
 Frame = -3

Query: 170 IRCWIVQRC 144
           +RCW++ +C
Sbjct: 222 LRCWLISKC 230



 Score = 20.6 bits (41), Expect = 6.1
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +3

Query: 66  LTLYIF*CFKQCRENINVSVTKSIL 140
           L  Y+F C+K  +++I   ++ S L
Sbjct: 15  LLFYLFYCYKTIKQHIYSLISLSYL 39


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 3.5
 Identities = 4/9 (44%), Positives = 8/9 (88%)
 Frame = -3

Query: 170 IRCWIVQRC 144
           +RCW++ +C
Sbjct: 222 LRCWLISKC 230



 Score = 20.6 bits (41), Expect = 6.1
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +3

Query: 66  LTLYIF*CFKQCRENINVSVTKSIL 140
           L  Y+F C+K  +++I   ++ S L
Sbjct: 15  LLFYLFYCYKTIKQHIYSLISLSYL 39


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,148
Number of Sequences: 336
Number of extensions: 1542
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8857716
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)