Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_A04
         (409 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM184051-1|CAJ75539.1|  112|Homo sapiens immunoglobulin lambda l...    31   2.0  
AM181365-1|CAJ57415.1|  112|Homo sapiens immunoglobulin lambda l...    30   2.6  
AJ972224-1|CAI99708.1|  105|Homo sapiens immunoglobulin lambda l...    30   2.6  
D11017-1|BAA01773.2|  129|Homo sapiens Ig light chain variable r...    29   6.0  
AK124538-1|BAC85878.1|  256|Homo sapiens protein ( Homo sapiens ...    29   6.0  
AM184049-1|CAJ75537.1|  122|Homo sapiens immunoglobulin lambda l...    29   8.0  

>AM184051-1|CAJ75539.1|  112|Homo sapiens immunoglobulin lambda
           light chain protein.
          Length = 112

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 19/56 (33%), Positives = 22/56 (39%)
 Frame = +2

Query: 206 VSIGAATALACALSDVAVFACTVASFSPSNPISRTHRVYYD*QHEH*WLPRPHAGS 373
           VS G    L CA S  AV      S+S   P      + Y   H H W P   +GS
Sbjct: 10  VSPGGTVTLTCASSTGAVTNNDYPSWSQQKPGQAPRALIYATIHRHSWTPARFSGS 65


>AM181365-1|CAJ57415.1|  112|Homo sapiens immunoglobulin lambda
           light chain variable region protein.
          Length = 112

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 17/56 (30%), Positives = 24/56 (42%)
 Frame = +2

Query: 206 VSIGAATALACALSDVAVFACTVASFSPSNPISRTHRVYYD*QHEH*WLPRPHAGS 373
           VS G    L CA S  AV + + A++    P      + Y   + H W P   +GS
Sbjct: 12  VSPGGTVTLTCASSTGAVTSGSYANWFQQKPGQAPRALIYSTSNRHSWTPARFSGS 67


>AJ972224-1|CAI99708.1|  105|Homo sapiens immunoglobulin lambda
           light chain variable region protein.
          Length = 105

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 17/56 (30%), Positives = 23/56 (41%)
 Frame = +2

Query: 206 VSIGAATALACALSDVAVFACTVASFSPSNPISRTHRVYYD*QHEH*WLPRPHAGS 373
           VS G    L CA S  AV +    ++    P      + Y   H+H W P   +GS
Sbjct: 10  VSPGGTVTLTCASSTGAVTSTYYPNWFQQKPGQTPRPLIYGTSHKHSWTPARFSGS 65


>D11017-1|BAA01773.2|  129|Homo sapiens Ig light chain variable
           region protein.
          Length = 129

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 17/56 (30%), Positives = 23/56 (41%)
 Frame = +2

Query: 206 VSIGAATALACALSDVAVFACTVASFSPSNPISRTHRVYYD*QHEH*WLPRPHAGS 373
           VS G    L C  S  AV +   A +    P      + YD  ++H W P   +GS
Sbjct: 31  VSPGGTVTLTCGSSTGAVTSGHYAYWFQQKPGQAPRTLIYDTSNKHSWTPARFSGS 86


>AK124538-1|BAC85878.1|  256|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42547 fis, clone BRACE3004880. ).
          Length = 256

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +2

Query: 200 SDVSIGAATALACALSDVAVFACTVASFSPS 292
           S  S+ + T  AC LS V + AC ++S +PS
Sbjct: 144 STCSLSSVTLSACGLSRVTLSACGLSSMTPS 174


>AM184049-1|CAJ75537.1|  122|Homo sapiens immunoglobulin lambda
           light chain protein.
          Length = 122

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 16/56 (28%), Positives = 23/56 (41%)
 Frame = +2

Query: 206 VSIGAATALACALSDVAVFACTVASFSPSNPISRTHRVYYD*QHEH*WLPRPHAGS 373
           VS G    L CA S  AV +    ++    P      + Y   ++H W P   +GS
Sbjct: 10  VSPGGTVTLTCASSTGAVTSAHYPNWFQQKPGQAPRALIYSTSNKHSWTPARFSGS 65


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,110,447
Number of Sequences: 237096
Number of extensions: 941612
Number of successful extensions: 5853
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5853
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 3043111070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)