Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_A03
         (309 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   1.7  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    20   5.2  
AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450 ...    20   6.8  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    19   9.0  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 1.7
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 279 RHIVKCTWTGTKWR 238
           R I+KC W G  +R
Sbjct: 476 RQILKCMWCGQSFR 489


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 20.2 bits (40), Expect = 5.2
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +1

Query: 1   GSPVAAGIRHEV 36
           GSP++  IRHE+
Sbjct: 80  GSPISNRIRHEM 91


>AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 126

 Score = 19.8 bits (39), Expect = 6.8
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = +2

Query: 95  LSSALNFIIMVI 130
           +SSA+NF +MV+
Sbjct: 1   VSSAINFALMVL 12


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -1

Query: 114 KLRALDKKDTVLFV*LYYEL 55
           KL+  D+K+  LF   Y++L
Sbjct: 118 KLKTRDQKERNLFKNAYFQL 137


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,442
Number of Sequences: 336
Number of extensions: 1414
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5624413
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)