Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_A03
(309 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 23 0.64
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 23 0.64
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 23 0.64
DQ855482-1|ABH88169.1| 116|Apis mellifera chemosensory protein ... 22 1.5
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 22 1.5
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 22 1.5
AJ973399-1|CAJ01446.1| 116|Apis mellifera hypothetical protein ... 22 1.5
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 21 3.4
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 20 5.9
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 20 5.9
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 20 5.9
AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein. 20 7.8
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.4 bits (48), Expect = 0.64
Identities = 6/11 (54%), Positives = 7/11 (63%)
Frame = -1
Query: 264 CTWTGTKWRGY 232
CTW W+GY
Sbjct: 301 CTWAARPWQGY 311
Score = 20.2 bits (40), Expect = 5.9
Identities = 10/26 (38%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = -1
Query: 309 GNISSFHYR*RHIVKCTWTGTK-WRG 235
GN++S + R R + KC T + +RG
Sbjct: 550 GNLASNNDRIRQVTKCKATNEETYRG 575
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.4 bits (48), Expect = 0.64
Identities = 6/11 (54%), Positives = 7/11 (63%)
Frame = -1
Query: 264 CTWTGTKWRGY 232
CTW W+GY
Sbjct: 301 CTWAARPWQGY 311
Score = 20.2 bits (40), Expect = 5.9
Identities = 10/26 (38%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = -1
Query: 309 GNISSFHYR*RHIVKCTWTGTK-WRG 235
GN++S + R R + KC T + +RG
Sbjct: 550 GNLASNNDRIRQVTKCKATNEETYRG 575
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.4 bits (48), Expect = 0.64
Identities = 6/11 (54%), Positives = 7/11 (63%)
Frame = -1
Query: 264 CTWTGTKWRGY 232
CTW W+GY
Sbjct: 301 CTWAARPWQGY 311
Score = 20.2 bits (40), Expect = 5.9
Identities = 10/26 (38%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = -1
Query: 309 GNISSFHYR*RHIVKCTWTGTK-WRG 235
GN++S + R R + KC T + +RG
Sbjct: 550 GNLASNNDRIRQVTKCKATNEETYRG 575
>DQ855482-1|ABH88169.1| 116|Apis mellifera chemosensory protein 1
protein.
Length = 116
Score = 22.2 bits (45), Expect = 1.5
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +1
Query: 181 EKWQHYLECMLLNMASG 231
EKW H++E M+ G
Sbjct: 99 EKWNHFVEIMIKKKDEG 115
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 22.2 bits (45), Expect = 1.5
Identities = 6/10 (60%), Positives = 6/10 (60%)
Frame = -1
Query: 264 CTWTGTKWRG 235
C W G KW G
Sbjct: 223 CIWKGVKWTG 232
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 22.2 bits (45), Expect = 1.5
Identities = 6/10 (60%), Positives = 6/10 (60%)
Frame = -1
Query: 264 CTWTGTKWRG 235
C W G KW G
Sbjct: 276 CIWKGVKWTG 285
>AJ973399-1|CAJ01446.1| 116|Apis mellifera hypothetical protein
protein.
Length = 116
Score = 22.2 bits (45), Expect = 1.5
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +1
Query: 181 EKWQHYLECMLLNMASG 231
EKW H++E M+ G
Sbjct: 99 EKWNHFVEIMIKKKDEG 115
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 21.0 bits (42), Expect = 3.4
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -3
Query: 244 MERIYQMPCLEACILGNVAIFL 179
++RI+ AC+LG V I L
Sbjct: 546 LDRIFLWIFTVACVLGTVLIIL 567
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 20.2 bits (40), Expect = 5.9
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +1
Query: 40 YTQGRKFIVQSN 75
Y +GR FI+Q+N
Sbjct: 27 YGKGRGFIIQNN 38
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 20.2 bits (40), Expect = 5.9
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +1
Query: 217 NMASGISSPFSTSPRT 264
N++SG+S ST P T
Sbjct: 541 NLSSGLSISDSTKPET 556
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 20.2 bits (40), Expect = 5.9
Identities = 5/14 (35%), Positives = 9/14 (64%)
Frame = +1
Query: 178 IEKWQHYLECMLLN 219
+E W+H+ +C N
Sbjct: 427 VEFWEHHFQCRYPN 440
>AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein.
Length = 388
Score = 19.8 bits (39), Expect = 7.8
Identities = 6/16 (37%), Positives = 10/16 (62%)
Frame = -2
Query: 188 HFSISNNYYCLHNTRK 141
HF+ N+Y +H + K
Sbjct: 96 HFTALGNFYFVHESLK 111
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,222
Number of Sequences: 438
Number of extensions: 1792
Number of successful extensions: 18
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 6471036
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
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