Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_A01
         (454 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein p...    25   0.94 
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         24   2.2  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         24   2.2  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   5.0  
AJ438610-5|CAD27477.1|  135|Anopheles gambiae hypothetical prote...    22   8.8  

>AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein
           protein.
          Length = 400

 Score = 25.4 bits (53), Expect = 0.94
 Identities = 13/43 (30%), Positives = 19/43 (44%)
 Frame = -1

Query: 274 TKGRKQPTTHRPLQSMESNLRKGEYICNGRICKLKPGVVPKGC 146
           TKG ++ T   PL + E  L  G+      +C L+   V   C
Sbjct: 288 TKGTQKATFRVPLSAKERVLNPGKLKVGWCVCSLREATVQVKC 330


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 24.2 bits (50), Expect = 2.2
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +3

Query: 261 FRPFVLSKAKRLCLSRSN 314
           FRP+ +SK+ RLC S  +
Sbjct: 226 FRPYDISKSPRLCSSNGS 243


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 24.2 bits (50), Expect = 2.2
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +3

Query: 261 FRPFVLSKAKRLCLSRSN 314
           FRP+ +SK+ RLC S  +
Sbjct: 226 FRPYDISKSPRLCSSNGS 243


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 23.0 bits (47), Expect = 5.0
 Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
 Frame = -1

Query: 196 CN--GRICKLKPGVVPKGCNGMCQHAVNI*LH*YYLCRC 86
           CN  GR C+ KPGV  + C+    +  N   H    C C
Sbjct: 409 CNAEGR-CQCKPGVTGEKCDRCDSNYFNFGPHGCQPCNC 446


>AJ438610-5|CAD27477.1|  135|Anopheles gambiae hypothetical protein
           protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 8.8
 Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
 Frame = +2

Query: 248 SCRLFSSLCVVEGETPVSFKIEYLVI*GAVNVPPL--RIQRRCR 373
           S RL  S CVV   TP+ F   +        VPP+  R  RR R
Sbjct: 4   SSRLVESGCVVFPATPIRFSTHFY----GPFVPPVGFRYNRRLR 43


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 542,286
Number of Sequences: 2352
Number of extensions: 11660
Number of successful extensions: 17
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 38694201
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)