Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG1055
(437 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical ... 38 0.002
Z81481-3|CAB03949.1| 1496|Caenorhabditis elegans Hypothetical pr... 36 0.010
Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical pr... 36 0.010
AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical... 36 0.010
AL032651-1|CAB60580.1| 681|Caenorhabditis elegans Hypothetical ... 36 0.013
U58740-1|AAB00611.1| 1073|Caenorhabditis elegans Hypothetical pr... 33 0.091
AC024794-1|AAK68497.1| 994|Caenorhabditis elegans Hypothetical ... 33 0.12
Z81109-2|CAB03244.1| 408|Caenorhabditis elegans Hypothetical pr... 31 0.28
U41559-4|AAC24257.1| 413|Caenorhabditis elegans Hypothetical pr... 31 0.48
U88169-3|AAK68396.1| 345|Caenorhabditis elegans Hypothetical pr... 30 0.64
U88169-2|AAB42234.1| 342|Caenorhabditis elegans Hypothetical pr... 30 0.64
Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical pr... 28 2.6
U80445-3|AAK68258.1| 85|Caenorhabditis elegans Antibacterial f... 28 2.6
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 28 2.6
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 28 2.6
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 28 2.6
AB029811-2|BAA89492.1| 66|Caenorhabditis elegans ABF-2 protein. 28 2.6
AB029810-1|BAA89490.1| 85|Caenorhabditis elegans ABF-2 protein. 28 2.6
Z71177-5|CAA94871.2| 531|Caenorhabditis elegans Hypothetical pr... 28 3.4
U80030-2|AAG24161.2| 362|Caenorhabditis elegans Serpentine rece... 28 3.4
U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile (un... 27 4.5
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 27 6.0
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 27 6.0
U40410-5|AAA81394.3| 1199|Caenorhabditis elegans Hypothetical pr... 27 6.0
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 27 6.0
U41035-2|AAM69088.1| 1371|Caenorhabditis elegans Uncoordinated p... 27 7.9
U41035-1|AAB37028.2| 1563|Caenorhabditis elegans Uncoordinated p... 27 7.9
AF257062-1|AAK49331.1| 1563|Caenorhabditis elegans Rab3-interact... 27 7.9
AB162903-1|BAD32699.1| 159|Caenorhabditis elegans Rim protein. 27 7.9
>AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical
protein R52.2 protein.
Length = 1019
Score = 38.3 bits (85), Expect = 0.002
Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 6/106 (5%)
Frame = -1
Query: 329 ETLLVTHSTNNKAYI--QVPTSKVHCHVSPV--SLTTNSSQQQYKKPRACLLCENYHPLY 162
ETL+ T S +NK + ++ T VH H L ++ Q P C+ C + ++
Sbjct: 267 ETLVNTISNDNKEPLDRKLTTMSVHQHPRHTHQQLPNKTTNGQTLSP--CIFCSSTSHVH 324
Query: 161 TCQSFIDFNL-QKKLKFVQDNNLCPNCLRPGHSVSNC-RFGSCRKC 30
+ FN + +++ ++ LC CLR GH S C R +C C
Sbjct: 325 RHEECPIFNTAEARIQKAREIGLCFGCLRSGHQRSKCSRPRTCNHC 370
>Z81481-3|CAB03949.1| 1496|Caenorhabditis elegans Hypothetical
protein C38D9.3 protein.
Length = 1496
Score = 36.3 bits (80), Expect = 0.010
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = -1
Query: 194 CLLCENYHPLYTCQSFIDFNLQKKLKFVQDNNLCPNCLRPGHSVSNCR-FGSCRKC 30
C+ C H C + ++ + +++ LC NCL P H + CR + SC C
Sbjct: 702 CMACMGPHKSMRCT----LSSKQFREVIREKRLCANCLNPHHDIKKCRSYRSCAYC 753
>Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical
protein F15D4.7 protein.
Length = 2268
Score = 36.3 bits (80), Expect = 0.010
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = -1
Query: 194 CLLCENYHPLYTCQSFIDFNLQKKLKFVQDNNLCPNCLRPGHSVSNCR-FGSCRKC 30
C+ C H C + ++ + +++ LC NCL P H + CR + SC C
Sbjct: 663 CMACMGPHKSMRCT----LSSKQFREVIREKKLCANCLNPHHDIEKCRSYRSCAYC 714
>AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical
protein F15D4.7 protein.
Length = 2268
Score = 36.3 bits (80), Expect = 0.010
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = -1
Query: 194 CLLCENYHPLYTCQSFIDFNLQKKLKFVQDNNLCPNCLRPGHSVSNCR-FGSCRKC 30
C+ C H C + ++ + +++ LC NCL P H + CR + SC C
Sbjct: 663 CMACMGPHKSMRCT----LSSKQFREVIREKKLCANCLNPHHDIEKCRSYRSCAYC 714
>AL032651-1|CAB60580.1| 681|Caenorhabditis elegans Hypothetical
protein Y6D1A.1 protein.
Length = 681
Score = 35.9 bits (79), Expect = 0.013
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Frame = -1
Query: 194 CLLCENYHPLYTCQSFIDFNLQKKLKFVQDNNLCPNCLRPGHSVSNCRFGS---CRKCN 27
C+LC N H + C ID N +++ + C CL HS NCR CR CN
Sbjct: 596 CVLCGNRHTVDQCFKIIDVNNRREELLM--GGRCTRCLGK-HSFKNCRLVKLHVCRYCN 651
Score = 31.5 bits (68), Expect = 0.28
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 4/64 (6%)
Frame = -1
Query: 194 CLLCENYHPLYTCQSFIDFNLQKKLKFVQDNNLCPNCLRPGHSVSNCR----FGSCRKCN 27
C+LC N H + C I+ N +++ + C CL HS CR R C+
Sbjct: 452 CVLCGNRHTVDQCFKIINVNNRREALLM--GGRCTRCLGK-HSFQTCRRVESHDQSRSCD 508
Query: 26 KRPS 15
+ PS
Sbjct: 509 RSPS 512
>U58740-1|AAB00611.1| 1073|Caenorhabditis elegans Hypothetical
protein R09H3.1 protein.
Length = 1073
Score = 33.1 bits (72), Expect = 0.091
Identities = 19/62 (30%), Positives = 28/62 (45%)
Frame = -1
Query: 215 QYKKPRACLLCENYHPLYTCQSFIDFNLQKKLKFVQDNNLCPNCLRPGHSVSNCRFGSCR 36
Q +K C+ C H C+ F ++ + ++D NLC CL H C+ S R
Sbjct: 515 QPEKGVLCIACSGPHKPMRCE----FTSKQFRQAIRDKNLCAICLVRNHHTQQCK--SNR 568
Query: 35 KC 30
KC
Sbjct: 569 KC 570
>AC024794-1|AAK68497.1| 994|Caenorhabditis elegans Hypothetical
protein Y48G1BM.5 protein.
Length = 994
Score = 32.7 bits (71), Expect = 0.12
Identities = 18/64 (28%), Positives = 27/64 (42%)
Frame = -1
Query: 218 QQYKKPRACLLCENYHPLYTCQSFIDFNLQKKLKFVQDNNLCPNCLRPGHSVSNCRFGSC 39
Q++ C C+ HPL TC ++ K +F +N C C P H NC +
Sbjct: 917 QEFLDGDPCPPCKKDHPLQTCTMGA---IEVK-RFCINNGRCTICSSPSHITGNCSYAQS 972
Query: 38 RKCN 27
+ N
Sbjct: 973 MQDN 976
>Z81109-2|CAB03244.1| 408|Caenorhabditis elegans Hypothetical
protein R10D12.2 protein.
Length = 408
Score = 31.5 bits (68), Expect = 0.28
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 12/83 (14%)
Frame = -1
Query: 245 VSLTTNSSQQQYKKPRACLLC---EN--YH----PLYTCQSFIDFNLQKKLKFV--QDNN 99
VS T N+ Q + R CL+C EN +H C SF + K+++V Q NN
Sbjct: 36 VSFTLNNYDQTNEVARTCLVCTITENVRFHFGSTTCLACASFFRRTVSLKIQYVCKQSNN 95
Query: 98 -LCPNCLRPGHSVSNCRFGSCRK 33
+ + +R G +CRF +C K
Sbjct: 96 CIVSHAVRSG--CRSCRFQNCLK 116
>U41559-4|AAC24257.1| 413|Caenorhabditis elegans Hypothetical
protein C26B2.1 protein.
Length = 413
Score = 30.7 bits (66), Expect = 0.48
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Frame = -1
Query: 107 DNNLCPNCLRPGHSVSNCRF--GSCRKCNKRPSC 12
DN CP CL P SV R C CN P C
Sbjct: 45 DNIFCPRCLEPS-SVPEARLKKHKCASCNDCPKC 77
>U88169-3|AAK68396.1| 345|Caenorhabditis elegans Hypothetical
protein T03F1.6b protein.
Length = 345
Score = 30.3 bits (65), Expect = 0.64
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +1
Query: 244 TGDTWQWTLDVGTCIYALLLVLCVTNNVSNMSALFLRKVITLSTLTAGVV 393
TG W+ + GTCI L L +C + S + R TL +L V+
Sbjct: 83 TGCDWEDVIKYGTCIEKLELNICPGKSTSQLFQTIKRASFTLRSLKINVL 132
>U88169-2|AAB42234.1| 342|Caenorhabditis elegans Hypothetical
protein T03F1.6a protein.
Length = 342
Score = 30.3 bits (65), Expect = 0.64
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +1
Query: 244 TGDTWQWTLDVGTCIYALLLVLCVTNNVSNMSALFLRKVITLSTLTAGVV 393
TG W+ + GTCI L L +C + S + R TL +L V+
Sbjct: 83 TGCDWEDVIKYGTCIEKLELNICPGKSTSQLFQTIKRASFTLRSLKINVL 132
>Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical
protein F26C11.3 protein.
Length = 1317
Score = 28.3 bits (60), Expect = 2.6
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Frame = +1
Query: 214 CCCELFV-VSDTGDTWQWTL---DVGTCIYALLLVLCVTNNVSNMSALFLRKVITLSTLT 381
CC E + V ++ D+ +W L D AL+ +L T N ++ LST T
Sbjct: 231 CCSETSIQVLNSSDSTRWILTTSDSWNKANALINLLYCTPNACPQQSMLWTNCSNLSTTT 290
Query: 382 AGVVCLEVSPLLTAGME 432
+ L + LLT E
Sbjct: 291 SSSTMLSSTTLLTTETE 307
>U80445-3|AAK68258.1| 85|Caenorhabditis elegans Antibacterial
factor related protein2 protein.
Length = 85
Score = 28.3 bits (60), Expect = 2.6
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -1
Query: 68 SVSNCRFGSCRKCNKRPSC 12
S+ NC GSC+K + RP+C
Sbjct: 46 SMQNCGTGSCKKRSGRPTC 64
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 28.3 bits (60), Expect = 2.6
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1
Query: 104 NNLCPNCLRPGHSVSNC 54
NN C NC +PGH S+C
Sbjct: 157 NNNCFNCQQPGHRSSDC 173
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 28.3 bits (60), Expect = 2.6
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1
Query: 104 NNLCPNCLRPGHSVSNC 54
NN C NC +PGH S+C
Sbjct: 157 NNNCFNCQQPGHRSSDC 173
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 28.3 bits (60), Expect = 2.6
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1
Query: 104 NNLCPNCLRPGHSVSNC 54
NN C NC +PGH S+C
Sbjct: 157 NNNCFNCQQPGHRSSDC 173
>AB029811-2|BAA89492.1| 66|Caenorhabditis elegans ABF-2 protein.
Length = 66
Score = 28.3 bits (60), Expect = 2.6
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -1
Query: 68 SVSNCRFGSCRKCNKRPSC 12
S+ NC GSC+K + RP+C
Sbjct: 46 SMQNCGTGSCKKRSGRPTC 64
>AB029810-1|BAA89490.1| 85|Caenorhabditis elegans ABF-2 protein.
Length = 85
Score = 28.3 bits (60), Expect = 2.6
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -1
Query: 68 SVSNCRFGSCRKCNKRPSC 12
S+ NC GSC+K + RP+C
Sbjct: 46 SMQNCGTGSCKKRSGRPTC 64
>Z71177-5|CAA94871.2| 531|Caenorhabditis elegans Hypothetical
protein AC3.8 protein.
Length = 531
Score = 27.9 bits (59), Expect = 3.4
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 6/52 (11%)
Frame = -2
Query: 262 TAMCLQYHSLQ--IVHNNNIKNHALAYYARIIIHYT----LVNLLLTLIYKK 125
TA + H+L+ VH N IK + L YA III + ++NL++ +Y+K
Sbjct: 471 TAKFGRVHALEPYSVHYNFIKYYMLDAYAIIIIFFLSILYVLNLIIKFVYRK 522
>U80030-2|AAG24161.2| 362|Caenorhabditis elegans Serpentine
receptor, class w protein121 protein.
Length = 362
Score = 27.9 bits (59), Expect = 3.4
Identities = 18/69 (26%), Positives = 39/69 (56%)
Frame = +1
Query: 202 GFLYCCCELFVVSDTGDTWQWTLDVGTCIYALLLVLCVTNNVSNMSALFLRKVITLSTLT 381
G ++C +F + + + + L +GT + LL V N ++ ++++F +ITL++ T
Sbjct: 271 GLVFCVAIMFFIVE----FPYGLSIGTA-WIFLLAPGVYNILNQLASIF-SMLITLNSCT 324
Query: 382 AGVVCLEVS 408
++CL +S
Sbjct: 325 HLIICLIMS 333
>U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile
(unfertilizable) protein2 protein.
Length = 548
Score = 27.5 bits (58), Expect = 4.5
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Frame = -1
Query: 185 CENYHPLYTCQSFIDFNLQKKLK-FVQDNNLCPNCLRPGHSVSNCRFG----SCR-KCNK 24
C+ +Y+C++ I+ +KK K V +C + + V NC G SCR KC+K
Sbjct: 159 CKECQSIYSCRAHIEEESEKKDKTSVLPTLICLTAEKLCNGVENCPDGSDEASCRSKCSK 218
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 27.1 bits (57), Expect = 6.0
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 104 NNLCPNCLRPGHSVSNC 54
NN C NC +PGH ++C
Sbjct: 256 NNNCFNCQQPGHRSNDC 272
Score = 27.1 bits (57), Expect = 6.0
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 104 NNLCPNCLRPGHSVSNC 54
NN C NC +PGH ++C
Sbjct: 370 NNNCFNCQQPGHRSNDC 386
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 27.1 bits (57), Expect = 6.0
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 104 NNLCPNCLRPGHSVSNC 54
NN C NC +PGH ++C
Sbjct: 256 NNNCFNCQQPGHRSNDC 272
Score = 27.1 bits (57), Expect = 6.0
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 104 NNLCPNCLRPGHSVSNC 54
NN C NC +PGH ++C
Sbjct: 370 NNNCFNCQQPGHRSNDC 386
>U40410-5|AAA81394.3| 1199|Caenorhabditis elegans Hypothetical protein
C54G7.4 protein.
Length = 1199
Score = 27.1 bits (57), Expect = 6.0
Identities = 10/32 (31%), Positives = 14/32 (43%)
Frame = -1
Query: 98 LCPNCLRPGHSVSNCRFGSCRKCNKRPSCRIP 3
LCP C H ++ C C+ S R+P
Sbjct: 1168 LCPRCKHRAHQHEIPKYNCCPLCHDMESFRVP 1199
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 27.1 bits (57), Expect = 6.0
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 104 NNLCPNCLRPGHSVSNC 54
NN C NC +PGH ++C
Sbjct: 256 NNNCFNCQQPGHRSNDC 272
Score = 27.1 bits (57), Expect = 6.0
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 104 NNLCPNCLRPGHSVSNC 54
NN C NC +PGH ++C
Sbjct: 370 NNNCFNCQQPGHRSNDC 386
>U41035-2|AAM69088.1| 1371|Caenorhabditis elegans Uncoordinated
protein 10, isoform b protein.
Length = 1371
Score = 26.6 bits (56), Expect = 7.9
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 6/42 (14%)
Frame = -1
Query: 128 KKLKFVQDNNLCPNCLRP------GHSVSNCRFGSCRKCNKR 21
KKL QD+ +C C + GH C+ SC +C R
Sbjct: 61 KKLVGTQDDAICQICQKTKFADGIGHKCFYCQLRSCARCGGR 102
>U41035-1|AAB37028.2| 1563|Caenorhabditis elegans Uncoordinated
protein 10, isoform a protein.
Length = 1563
Score = 26.6 bits (56), Expect = 7.9
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 6/42 (14%)
Frame = -1
Query: 128 KKLKFVQDNNLCPNCLRP------GHSVSNCRFGSCRKCNKR 21
KKL QD+ +C C + GH C+ SC +C R
Sbjct: 61 KKLVGTQDDAICQICQKTKFADGIGHKCFYCQLRSCARCGGR 102
>AF257062-1|AAK49331.1| 1563|Caenorhabditis elegans Rab3-interacting
molecule UNC-10 protein.
Length = 1563
Score = 26.6 bits (56), Expect = 7.9
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 6/42 (14%)
Frame = -1
Query: 128 KKLKFVQDNNLCPNCLRP------GHSVSNCRFGSCRKCNKR 21
KKL QD+ +C C + GH C+ SC +C R
Sbjct: 61 KKLVGTQDDAICQICQKTKFADGIGHKCFYCQLRSCARCGGR 102
>AB162903-1|BAD32699.1| 159|Caenorhabditis elegans Rim protein.
Length = 159
Score = 26.6 bits (56), Expect = 7.9
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 6/42 (14%)
Frame = -1
Query: 128 KKLKFVQDNNLCPNCLRP------GHSVSNCRFGSCRKCNKR 21
KKL QD+ +C C + GH C+ SC +C R
Sbjct: 61 KKLVGTQDDAICQICQKTKFADGIGHKCFYCQLRSCARCGGR 102
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,287,373
Number of Sequences: 27780
Number of extensions: 210691
Number of successful extensions: 688
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 687
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 745968860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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