Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG1055
(437 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g75560.1 68414.m08781 zinc knuckle (CCHC-type) family protein... 32 0.19
At1g49130.1 68414.m05508 zinc finger (B-box type) family protein... 31 0.26
At5g10370.1 68418.m01203 helicase domain-containing protein / IB... 31 0.45
At5g52380.1 68418.m06499 zinc knuckle (CCHC-type) family protein... 30 0.79
At4g01020.1 68417.m00137 helicase domain-containing protein / IB... 29 1.0
At3g28620.1 68416.m03572 zinc finger (C3HC4-type RING finger) fa... 29 1.4
At1g06770.1 68414.m00720 zinc finger (C3HC4-type RING finger) fa... 28 2.4
At1g59580.2 68414.m06701 mitogen-activated protein kinase, putat... 28 3.2
At1g59580.1 68414.m06700 mitogen-activated protein kinase, putat... 28 3.2
At1g10210.1 68414.m01151 mitogen-activated protein kinase, putat... 28 3.2
At5g63920.1 68418.m08026 DNA topoisomerase III alpha, putative s... 27 4.2
At5g14420.4 68418.m01687 copine-related low similarity to SP|Q99... 27 4.2
At5g14420.3 68418.m01686 copine-related low similarity to SP|Q99... 27 4.2
At5g14420.2 68418.m01685 copine-related low similarity to SP|Q99... 27 4.2
At5g14420.1 68418.m01684 copine-related low similarity to SP|Q99... 27 4.2
At1g09470.1 68414.m01059 expressed protein ; expression supporte... 27 4.2
At5g38630.1 68418.m04672 cytochrome B561 family protein contains... 27 5.5
At5g03360.1 68418.m00289 DC1 domain-containing protein contains ... 27 5.5
At1g69280.1 68414.m07943 expressed protein 27 5.5
At5g16720.1 68418.m01958 expressed protein contains Pfam profile... 27 7.3
At1g66450.1 68414.m07549 DC1 domain-containing protein contains ... 27 7.3
At1g01630.1 68414.m00080 SEC14 cytosolic factor, putative / phos... 27 7.3
At5g59920.1 68418.m07514 DC1 domain-containing protein contains ... 26 9.7
At4g19180.1 68417.m02830 nucleoside phosphatase family protein /... 26 9.7
At2g30580.1 68415.m03726 zinc finger (C3HC4-type RING finger) fa... 26 9.7
At1g48095.1 68414.m05366 hypothetical protein 26 9.7
>At1g75560.1 68414.m08781 zinc knuckle (CCHC-type) family protein
contains Pfam domain, PF00098: Zinc knuckle
Length = 257
Score = 31.9 bits (69), Expect = 0.19
Identities = 13/25 (52%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Frame = -1
Query: 95 CPNCLRPGHSVSNC-RFGSCRKCNK 24
C NC PGH SNC G C C K
Sbjct: 95 CWNCREPGHVASNCSNEGICHSCGK 119
Score = 31.1 bits (67), Expect = 0.34
Identities = 12/25 (48%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Frame = -1
Query: 101 NLCPNCLRPGHSVSNC-RFGSCRKC 30
NLC NC RPGH +C C C
Sbjct: 55 NLCNNCKRPGHFARDCSNVSVCNNC 79
Score = 27.5 bits (58), Expect = 4.2
Identities = 10/27 (37%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = -1
Query: 107 DNNLCPNCLRPGHSVSNC-RFGSCRKC 30
D LC NC + GH ++C +C+ C
Sbjct: 136 DLRLCNNCFKQGHLAADCTNDKACKNC 162
>At1g49130.1 68414.m05508 zinc finger (B-box type) family protein
contains similarity to zinc finger protein GI:3618318
from [Oryza sativa]
Length = 326
Score = 31.5 bits (68), Expect = 0.26
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -1
Query: 221 QQQYKKPRACLLCENYHPLYTCQS 150
Q+ K+PRAC LC N H ++ C S
Sbjct: 19 QEDVKQPRACELCLNKHAVWYCAS 42
>At5g10370.1 68418.m01203 helicase domain-containing protein / IBR
domain-containing protein / zinc finger protein-related
similar to RNA-dependent ATPase/helicase Cdc28p
[Schizosaccharomyces pombe] GI:1439562; contains Pfam
profiles PF04408: Helicase associated domain (HA2),
PF00271: Helicase conserved C-terminal domain, weak hit
to PF00097: Zinc finger, C3HC4 type (RING finger),
PF01485: IBR domain
Length = 1775
Score = 30.7 bits (66), Expect = 0.45
Identities = 21/63 (33%), Positives = 26/63 (41%), Gaps = 6/63 (9%)
Frame = -1
Query: 194 CLLCE-NYHPLYTCQSFIDF--NLQKKLK-FVQDNNL--CPNCLRPGHSVSNCRFGSCRK 33
C C YHPL TC+ + F N LK + + N+ CP C C CR
Sbjct: 1683 CTRCHLEYHPLITCERYKKFKENPDLSLKDWAKGKNVKECPICKSTIEKTDGCNHMKCR- 1741
Query: 32 CNK 24
C K
Sbjct: 1742 CGK 1744
>At5g52380.1 68418.m06499 zinc knuckle (CCHC-type) family protein
contains Pfam domain, PF00098: Zinc knuckle
Length = 268
Score = 29.9 bits (64), Expect = 0.79
Identities = 23/86 (26%), Positives = 35/86 (40%), Gaps = 1/86 (1%)
Frame = -1
Query: 260 CHVSPVSLTTNSSQQQYKKPRACLLCENY-HPLYTCQSFIDFNLQKKLKFVQDNNLCPNC 84
CH + ++++ + CL C H L C + + +KKL C NC
Sbjct: 79 CHSKTHIAKLCPEKSEWERNKICLQCRRRGHSLKNCPEKNNESSEKKL--------CYNC 130
Query: 83 LRPGHSVSNCRFGSCRKCNKRPSCRI 6
GHS+S+C + K SC I
Sbjct: 131 GDTGHSLSHCPYPMEDGGTKFASCFI 156
>At4g01020.1 68417.m00137 helicase domain-containing protein / IBR
domain-containing protein / zinc finger protein-related
similar to SP|Q14562 ATP-dependent helicase DDX8 (RNA
helicase HRH1) (DEAH-box protein 8) {Homo sapiens};
contains Pfam profiles PF04408: Helicase associated
domain (HA2), PF00271: Helicase conserved C-terminal
domain, PF00097: Zinc finger, C3HC4 type (RING finger),
PF01485: IBR domain
Length = 1787
Score = 29.5 bits (63), Expect = 1.0
Identities = 19/63 (30%), Positives = 22/63 (34%), Gaps = 6/63 (9%)
Frame = -1
Query: 194 CLLCE-NYHPLYTCQSFIDFNLQKKLKFV-----QDNNLCPNCLRPGHSVSNCRFGSCRK 33
C C YHPL TC+ + F L +D CP C C CR
Sbjct: 1680 CTRCHLEYHPLITCERYKKFKENPDLSLKDWAKGKDVKECPICKSTIEKTDGCNHLQCR- 1738
Query: 32 CNK 24
C K
Sbjct: 1739 CGK 1741
>At3g28620.1 68416.m03572 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING-H2 finger protein
RHA2b [Arabidopsis thaliana] GI:3790571; contains Pfam
profile PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 211
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 9/73 (12%)
Frame = -1
Query: 266 VHCHVSPVS--LTTNSSQQQYKKPRACLLC-------ENYHPLYTCQSFIDFNLQKKLKF 114
V C +P++ S Q++ ++ + C +C E+Y + TC + +
Sbjct: 134 VSCDSAPLATDFDQESQQEEEEESKTCAICLENLLRSEDYCEMPTCSHYFHEPCLTEW-L 192
Query: 113 VQDNNLCPNCLRP 75
+DNN CP C +P
Sbjct: 193 TRDNNSCPLCRKP 205
>At1g06770.1 68414.m00720 zinc finger (C3HC4-type RING finger)
family protein
Length = 421
Score = 28.3 bits (60), Expect = 2.4
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -1
Query: 101 NLCPNCLRPGHSVSNCRFGSCRKC 30
++C N LR ++S C CRKC
Sbjct: 17 SICDNILRDATTISECLHTFCRKC 40
>At1g59580.2 68414.m06701 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK2) identical to mitogen-activated
protein kinase homolog 2 (AtMPK2)[Arabidopsis thaliana]
SWISS-PROT:Q39022; PMID:12119167
Length = 376
Score = 27.9 bits (59), Expect = 3.2
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 7/53 (13%)
Frame = -1
Query: 158 CQSFIDFNLQKKLKFVQDNNLCPNCLRPGHSVSN-------CRFGSCRKCNKR 21
CQ F+ F L + LK++ N+ L+PG+ + N C FG R N +
Sbjct: 135 CQYFL-FQLLRGLKYIHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNTK 186
>At1g59580.1 68414.m06700 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK2) identical to mitogen-activated
protein kinase homolog 2 (AtMPK2)[Arabidopsis thaliana]
SWISS-PROT:Q39022; PMID:12119167
Length = 376
Score = 27.9 bits (59), Expect = 3.2
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 7/53 (13%)
Frame = -1
Query: 158 CQSFIDFNLQKKLKFVQDNNLCPNCLRPGHSVSN-------CRFGSCRKCNKR 21
CQ F+ F L + LK++ N+ L+PG+ + N C FG R N +
Sbjct: 135 CQYFL-FQLLRGLKYIHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNTK 186
>At1g10210.1 68414.m01151 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK1) identical to mitogen-activated
protein kinase homolog 1 (AtMPK1)[Arabidopsis thaliana]
SWISS-PROT:Q39021; PMID:12119167
Length = 370
Score = 27.9 bits (59), Expect = 3.2
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 7/53 (13%)
Frame = -1
Query: 158 CQSFIDFNLQKKLKFVQDNNLCPNCLRPGHSVSN-------CRFGSCRKCNKR 21
CQ F+ F L + LK++ N+ L+PG+ + N C FG R N +
Sbjct: 135 CQYFL-FQLLRGLKYIHSANILHRDLKPGNLLVNANCDLKICDFGLARASNTK 186
>At5g63920.1 68418.m08026 DNA topoisomerase III alpha, putative
similar to Swiss-Prot:Q9NG98 DNA topoisomerase III alpha
[Drosophila melanogaster]
Length = 926
Score = 27.5 bits (58), Expect = 4.2
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -1
Query: 110 QDNNLCPNCLRPGHSVSNCRFGSCRKCNKRPSCRIP 3
+ +N+C +C + GH+ +NC N RP+ P
Sbjct: 762 RQSNVCIHCQQRGHASTNCPSRVPASRNSRPTATNP 797
>At5g14420.4 68418.m01687 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 27.5 bits (58), Expect = 4.2
Identities = 15/40 (37%), Positives = 17/40 (42%), Gaps = 5/40 (12%)
Frame = -1
Query: 107 DNNLCPNCL-RPGHSVSNCRFGSCRKCNKR----PSCRIP 3
DN LCP CL P C +C +C P CR P
Sbjct: 421 DNQLCPICLSNPKDMAFGCGHQTCCECGPDLQMCPICRAP 460
>At5g14420.3 68418.m01686 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 27.5 bits (58), Expect = 4.2
Identities = 15/40 (37%), Positives = 17/40 (42%), Gaps = 5/40 (12%)
Frame = -1
Query: 107 DNNLCPNCL-RPGHSVSNCRFGSCRKCNKR----PSCRIP 3
DN LCP CL P C +C +C P CR P
Sbjct: 421 DNQLCPICLSNPKDMAFGCGHQTCCECGPDLQMCPICRAP 460
>At5g14420.2 68418.m01685 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 27.5 bits (58), Expect = 4.2
Identities = 15/40 (37%), Positives = 17/40 (42%), Gaps = 5/40 (12%)
Frame = -1
Query: 107 DNNLCPNCL-RPGHSVSNCRFGSCRKCNKR----PSCRIP 3
DN LCP CL P C +C +C P CR P
Sbjct: 421 DNQLCPICLSNPKDMAFGCGHQTCCECGPDLQMCPICRAP 460
>At5g14420.1 68418.m01684 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 27.5 bits (58), Expect = 4.2
Identities = 15/40 (37%), Positives = 17/40 (42%), Gaps = 5/40 (12%)
Frame = -1
Query: 107 DNNLCPNCL-RPGHSVSNCRFGSCRKCNKR----PSCRIP 3
DN LCP CL P C +C +C P CR P
Sbjct: 421 DNQLCPICLSNPKDMAFGCGHQTCCECGPDLQMCPICRAP 460
>At1g09470.1 68414.m01059 expressed protein ; expression supported
by MPSS
Length = 336
Score = 27.5 bits (58), Expect = 4.2
Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = -1
Query: 380 VKVDNVIT--FLKNRADMLETLLVTHSTNNKAYIQVPTSKVHCHV 252
++ +V T F+K AD+ L TH+T + + ++ HC V
Sbjct: 84 IRASDVATEKFVKELADIKSQLAATHATAEASALSAESAHSHCRV 128
>At5g38630.1 68418.m04672 cytochrome B561 family protein contains
Pfam domain, PF03188: Cytochrome b561
Length = 230
Score = 27.1 bits (57), Expect = 5.5
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +1
Query: 262 WTLDVGTCIYALLLVLCVTNNVSNMSALFLRKVITLSTLTAGVV 393
W + +G IYAL LV T + ++ L + +VIT + A +V
Sbjct: 156 WHVFLGISIYALALVTATTGILEKVTFLQVNQVITRYSTEAMLV 199
>At5g03360.1 68418.m00289 DC1 domain-containing protein contains Pfam
profile PF03107: DC1 domain
Length = 1610
Score = 27.1 bits (57), Expect = 5.5
Identities = 17/51 (33%), Positives = 20/51 (39%), Gaps = 2/51 (3%)
Frame = -1
Query: 302 NNKAYIQVPTSKVHCHVSPVSLTTNSSQQQYKKPRACLLCEN--YHPLYTC 156
N+K Y Q P H SL SSQ + R C C+ H Y C
Sbjct: 1233 NHKGYEQAPVDVKHPLHPKHSLQLVSSQPSSVRTRECYCCDEDLAHIFYCC 1283
>At1g69280.1 68414.m07943 expressed protein
Length = 400
Score = 27.1 bits (57), Expect = 5.5
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = -1
Query: 308 STNNKAYIQVPTSKVHCHVSPVSLTTNSSQQQYKKPRACLLCENYHPLYTC 156
ST + +Y K + +T QQ+ KK + L C+N P ++C
Sbjct: 264 STQSFSYPITKKKKKKKKATKKKMTQQQQQQKQKKRCSWLCCKNTGPCFSC 314
>At5g16720.1 68418.m01958 expressed protein contains Pfam profile
PF04576: Protein of unknown function, DUF593
Length = 675
Score = 26.6 bits (56), Expect = 7.3
Identities = 17/56 (30%), Positives = 22/56 (39%)
Frame = -1
Query: 191 LLCENYHPLYTCQSFIDFNLQKKLKFVQDNNLCPNCLRPGHSVSNCRFGSCRKCNK 24
LLC+N+ SF + K + NLC +C SN G C C K
Sbjct: 80 LLCQNHIAELASLSFC----RTHGKLSESANLCSDCSNREEEQSNIGLGFCTCCQK 131
>At1g66450.1 68414.m07549 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 700
Score = 26.6 bits (56), Expect = 7.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 107 DNNLCPNCLRPGHSVSNCRFGSCRKCN 27
+N LC C+ P +S +F SC KCN
Sbjct: 422 ENKLCQACITPIYSG---KFYSCMKCN 445
>At1g01630.1 68414.m00080 SEC14 cytosolic factor, putative /
phosphoglyceride transfer protein, putative contains
Pfam PF00650 : CRAL/TRIO domain and PF03765 : CRAL/TRIO,
N-terminus; similar to polyphosphoinositide binding
protein Ssh2p GB:AAB94599 GI:2739046 from [Glycine max]
Length = 255
Score = 26.6 bits (56), Expect = 7.3
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1
Query: 149 FIDFNLQKKLKFVQDNNLCPNCL 81
FID N +KK+ FV++ L P L
Sbjct: 209 FIDANTKKKIVFVENKKLTPTLL 231
>At5g59920.1 68418.m07514 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 710
Score = 26.2 bits (55), Expect = 9.7
Identities = 30/118 (25%), Positives = 47/118 (39%)
Frame = -1
Query: 371 DNVITFLKNRADMLETLLVTHSTNNKAYIQVPTSKVHCHVSPVSLTTNSSQQQYKKPRAC 192
D+ + FLK R + + L S +Y + ++ HV+ V L+ ++ P
Sbjct: 123 DHAVVFLKIREEKVPCELCKESIEGPSYSCLECD-MYFHVNCVHLS-----EEVNHP--- 173
Query: 191 LLCENYHPLYTCQSFIDFNLQKKLKFVQDNNLCPNCLRPGHSVSNCRFGSCRKCNKRP 18
C + HPL S + +K + N N L + S C F SC C K P
Sbjct: 174 --CHSIHPLKLITSESLTDDAEKSCLLCGNIPAENML---YHCSVCNFTSCLGCTKNP 226
>At4g19180.1 68417.m02830 nucleoside phosphatase family protein /
GDA1/CD39 family protein low similarity to SP|O18956
Ectonucleoside triphosphate diphosphohydrolase 1 (EC
3.6.1.5) (Ecto-apyrase) {Bos taurus}; contains Pfam
profile PF01150: GDA1/CD39 (nucleoside phosphatase)
family
Length = 740
Score = 26.2 bits (55), Expect = 9.7
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 274 VGTCIYALLLVLCVTNNVSNMSALFLRK 357
+ I +LLL+LC + VSN F RK
Sbjct: 588 ISILILSLLLLLCALSRVSNCLPRFFRK 615
>At2g30580.1 68415.m03726 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 420
Score = 26.2 bits (55), Expect = 9.7
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -1
Query: 98 LCPNCLRPGHSVSNCRFGSCRKC 30
LC LR ++S C CRKC
Sbjct: 22 LCDKLLRDATTISECLHTFCRKC 44
>At1g48095.1 68414.m05366 hypothetical protein
Length = 303
Score = 26.2 bits (55), Expect = 9.7
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -1
Query: 98 LCPNCLRPGHSVSNCRF 48
+C NC R H V+NC F
Sbjct: 76 ICTNCCRITHHVNNCPF 92
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,422,210
Number of Sequences: 28952
Number of extensions: 180694
Number of successful extensions: 584
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 564
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 584
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 692941200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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