Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG1053
         (558 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    25   0.33 
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    23   1.3  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   5.4  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     21   9.5  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   9.5  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    21   9.5  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    21   9.5  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   9.5  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   9.5  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    21   9.5  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 25.4 bits (53), Expect = 0.33
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +3

Query: 204  ITYAVFTTAVIHVCLMIFEEIPLQMN 281
            +TY + T AV   C    EE  LQ+N
Sbjct: 1366 VTYGIDTVAVCDACYSTIEEKNLQVN 1391


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -1

Query: 453 RPAPPKKRSTPLRST*RPDNDEPRASSVQ 367
           R    +KRST  +ST   ++  PRAS V+
Sbjct: 38  RTGEKRKRSTSSQSTEGENDARPRASQVK 66


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +2

Query: 230 SHPRMSNDIRGDPPPDEHPRSD 295
           S  + SND     PP+  PR+D
Sbjct: 247 SSRKRSNDDSVSQPPNRKPRTD 268


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 200 SHHVCCIHHRSHPRMSND 253
           SHH   IHH+  P + +D
Sbjct: 91  SHHGPPIHHQIRPPILHD 108


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 200 SHHVCCIHHRSHPRMSND 253
           SHH   IHH+  P + +D
Sbjct: 91  SHHGPPIHHQIRPPILHD 108


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/23 (30%), Positives = 10/23 (43%)
 Frame = -2

Query: 233 DCGGEYSIRDDLFSKHCIIFYNL 165
           DCG    +   + S HC   Y +
Sbjct: 79  DCGDRTQLEPPISSPHCERLYGI 101


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/23 (30%), Positives = 10/23 (43%)
 Frame = -2

Query: 233 DCGGEYSIRDDLFSKHCIIFYNL 165
           DCG    +   + S HC   Y +
Sbjct: 79  DCGDRTQLEPPISSPHCERLYGI 101


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 6/17 (35%), Positives = 15/17 (88%)
 Frame = +1

Query: 175 KIIQCLLNKSSRMLYSP 225
           +I+Q ++++S+R ++SP
Sbjct: 391 RIVQPMIDQSNRAVFSP 407


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 200 SHHVCCIHHRSHPRMSND 253
           SHH   IHH+  P + +D
Sbjct: 91  SHHGPPIHHQIRPPILHD 108


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 200 SHHVCCIHHRSHPRMSND 253
           SHH   IHH+  P + +D
Sbjct: 91  SHHGPPIHHQIRPPILHD 108


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,198
Number of Sequences: 336
Number of extensions: 2454
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13681771
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)