Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG1053
         (558 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024880-9|AAK85515.1|  446|Caenorhabditis elegans Hypothetical ...    28   4.0  
Z83218-2|CAB05687.1|  705|Caenorhabditis elegans Hypothetical pr...    27   6.9  
Z66522-7|CAA91409.2|  472|Caenorhabditis elegans Hypothetical pr...    27   6.9  
Z66520-13|CAA91392.2|  472|Caenorhabditis elegans Hypothetical p...    27   6.9  
U64854-6|AAB18318.2| 5079|Caenorhabditis elegans Uncoordinated p...    27   6.9  
U50301-2|AAM29675.1|  362|Caenorhabditis elegans Hypothetical pr...    27   6.9  
U32305-18|AAK18852.2|  719|Caenorhabditis elegans Hypothetical p...    27   6.9  
D45899-1|BAA08309.1| 5071|Caenorhabditis elegans ryanodine recep...    27   6.9  
Z82284-5|CAB05291.1|  418|Caenorhabditis elegans Hypothetical pr...    27   9.1  
Z82278-9|CAE17877.1|  323|Caenorhabditis elegans Hypothetical pr...    27   9.1  
Z82070-8|CAE17980.1|  323|Caenorhabditis elegans Hypothetical pr...    27   9.1  
Z75714-6|CAE54930.1|  532|Caenorhabditis elegans Hypothetical pr...    27   9.1  
Z75714-5|CAB00065.2|  581|Caenorhabditis elegans Hypothetical pr...    27   9.1  

>AC024880-9|AAK85515.1|  446|Caenorhabditis elegans Hypothetical
           protein Y97E10AR.6 protein.
          Length = 446

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 11/41 (26%), Positives = 22/41 (53%)
 Frame = +3

Query: 414 FGAVYYAFSEVLAYFTLCLWVVPFGLFVSLSANDYVLPTTE 536
           F  V+  FS + A+F  C  + PF +    S++ ++ P ++
Sbjct: 14  FSRVFSVFSPISAFFCFCFSIFPFSVPDIFSSHSFLHPLSK 54


>Z83218-2|CAB05687.1|  705|Caenorhabditis elegans Hypothetical
           protein C31A11.5 protein.
          Length = 705

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 5/39 (12%)
 Frame = +3

Query: 384 AVHHYLAFKYFGAVYYA-----FSEVLAYFTLCLWVVPF 485
           ++H Y +F+ F  +YYA      S + A+F  CL+ +PF
Sbjct: 618 SIHFYSSFQIF--MYYAVPTTVLSYIFAFFWSCLFEIPF 654


>Z66522-7|CAA91409.2|  472|Caenorhabditis elegans Hypothetical
           protein F14E5.1 protein.
          Length = 472

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 21/61 (34%), Positives = 32/61 (52%)
 Frame = +3

Query: 351 SFSFLTALMTLAVHHYLAFKYFGAVYYAFSEVLAYFTLCLWVVPFGLFVSLSANDYVLPT 530
           SFSFL+ +   ++   +   + G  Y   S +   F LC +VVPF LF +L    ++LP 
Sbjct: 153 SFSFLSEVSYSSMT--MVGSFLGQDYIIGSHL---FWLCFFVVPFCLFFTLIL--FILPE 205

Query: 531 T 533
           T
Sbjct: 206 T 206


>Z66520-13|CAA91392.2|  472|Caenorhabditis elegans Hypothetical
           protein F14E5.1 protein.
          Length = 472

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 21/61 (34%), Positives = 32/61 (52%)
 Frame = +3

Query: 351 SFSFLTALMTLAVHHYLAFKYFGAVYYAFSEVLAYFTLCLWVVPFGLFVSLSANDYVLPT 530
           SFSFL+ +   ++   +   + G  Y   S +   F LC +VVPF LF +L    ++LP 
Sbjct: 153 SFSFLSEVSYSSMT--MVGSFLGQDYIIGSHL---FWLCFFVVPFCLFFTLIL--FILPE 205

Query: 531 T 533
           T
Sbjct: 206 T 206


>U64854-6|AAB18318.2| 5079|Caenorhabditis elegans Uncoordinated
            protein 68 protein.
          Length = 5079

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +1

Query: 19   QNITKSRRNIKQKVHKESCYSCIY*VIYLFLFKECLLPW 135
            QNI+ + RN+   V + S    +Y VI LF+     + W
Sbjct: 4423 QNISTTMRNVSSSVRQMSWTQLLYAVIILFIRAGLAIGW 4461


>U50301-2|AAM29675.1|  362|Caenorhabditis elegans Hypothetical
           protein F20D6.5 protein.
          Length = 362

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = -2

Query: 230 CGGEYSIRDDLFSKHCIIFYNLGQII*ASGYSQGN 126
           C G+YS  + L+ KHC   Y    I+     + GN
Sbjct: 232 CHGDYSFHNLLYEKHCDGSYKFRAIVDFQSVNWGN 266


>U32305-18|AAK18852.2|  719|Caenorhabditis elegans Hypothetical
           protein B0336.3 protein.
          Length = 719

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 15/45 (33%), Positives = 20/45 (44%)
 Frame = -1

Query: 492 KDRREPPIDRA*SRPAPPKKRSTPLRST*RPDNDEPRASSVQSRN 358
           K    P + ++ S P+  K  S PLR    P   E R    QSR+
Sbjct: 107 KPTAPPGVQKSSSSPSASKAESRPLRKRISPPPSENREKEKQSRD 151


>D45899-1|BAA08309.1| 5071|Caenorhabditis elegans ryanodine receptor
            protein.
          Length = 5071

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +1

Query: 19   QNITKSRRNIKQKVHKESCYSCIY*VIYLFLFKECLLPW 135
            QNI+ + RN+   V + S    +Y VI LF+     + W
Sbjct: 4415 QNISTTMRNVSSSVRQMSWTQLLYAVIILFIRAGLAIGW 4453


>Z82284-5|CAB05291.1|  418|Caenorhabditis elegans Hypothetical
           protein T27E7.6 protein.
          Length = 418

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 16/47 (34%), Positives = 19/47 (40%)
 Frame = -2

Query: 455 VGQHLRKSVVHRSEVLEGQIMMNRERHQCSQETEAGHPDRGEVPQQK 315
           V +H  K    RSE  E Q    RE      E E  H    E+ Q+K
Sbjct: 115 VREHAEKMKELRSEGREAQERAEREHRMKMSEAEEEHRKEKEIAQEK 161


>Z82278-9|CAE17877.1|  323|Caenorhabditis elegans Hypothetical
           protein W04E12.9 protein.
          Length = 323

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = +3

Query: 375 MTLAVHHYLAFKYFGAVYYAFSEVLAYFTLCLWVVPF 485
           M  A   YL F  F A YY    +L +  L   +VPF
Sbjct: 271 MPCAAFFYLKFDNFEATYYFGGSLLVFAALISALVPF 307


>Z82070-8|CAE17980.1|  323|Caenorhabditis elegans Hypothetical
           protein W04E12.9 protein.
          Length = 323

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = +3

Query: 375 MTLAVHHYLAFKYFGAVYYAFSEVLAYFTLCLWVVPF 485
           M  A   YL F  F A YY    +L +  L   +VPF
Sbjct: 271 MPCAAFFYLKFDNFEATYYFGGSLLVFAALISALVPF 307


>Z75714-6|CAE54930.1|  532|Caenorhabditis elegans Hypothetical
           protein ZC434.9b protein.
          Length = 532

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 13/43 (30%), Positives = 19/43 (44%)
 Frame = +3

Query: 429 YAFSEVLAYFTLCLWVVPFGLFVSLSANDYVLPTTEEKHPLLG 557
           Y F E  +Y T+C W+          A  + + TT E  P+ G
Sbjct: 136 YGFGEYHSYQTICDWMKDIERKYPDKAKVFTMGTTSEGRPIQG 178


>Z75714-5|CAB00065.2|  581|Caenorhabditis elegans Hypothetical
           protein ZC434.9a protein.
          Length = 581

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 13/43 (30%), Positives = 19/43 (44%)
 Frame = +3

Query: 429 YAFSEVLAYFTLCLWVVPFGLFVSLSANDYVLPTTEEKHPLLG 557
           Y F E  +Y T+C W+          A  + + TT E  P+ G
Sbjct: 136 YGFGEYHSYQTICDWMKDIERKYPDKAKVFTMGTTSEGRPIQG 178


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,136,766
Number of Sequences: 27780
Number of extensions: 246215
Number of successful extensions: 679
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 679
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1144922904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)