Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG1051
(671 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0464 - 3504264-3504475,3504842-3505031,3505310-3505408,350... 84 8e-17
10_01_0217 + 2337950-2338085,2340766-2342436,2342636-2342898,234... 77 2e-14
03_06_0253 - 32666152-32666360,32666443-32666632,32666764-326668... 77 2e-14
03_04_0157 + 17791540-17791681,17792809-17792908,17793386-177934... 73 2e-13
07_01_1149 + 10789733-10791209,10791326-10791588,10791745-107919... 70 1e-12
03_06_0252 - 32656068-32656276,32656361-32656550,32656682-326567... 68 8e-12
07_01_1146 + 10756897-10757065,10763869-10765521,10765638-107659... 66 2e-11
01_03_0019 + 11696607-11696953,11697078-11697321 31 0.84
07_01_0985 - 8297560-8297610,8297728-8297939,8298327-8298449,829... 30 1.5
03_02_0339 - 7623897-7625837 30 1.5
01_01_0930 + 7347680-7347886,7348030-7348082,7348175-7348247,734... 28 7.8
>07_01_0464 - 3504264-3504475,3504842-3505031,3505310-3505408,
3505561-3505653,3505926-3506891,3507267-3507485,
3508038-3508247,3508371-3508630,3508956-3510737,
3510796-3511009
Length = 1414
Score = 84.2 bits (199), Expect = 8e-17
Identities = 54/180 (30%), Positives = 91/180 (50%)
Frame = +2
Query: 116 LSLSSESINPIYKSGGEVIKRSVSHGTQSFETDKEVWPLNQPVPKLEVLVQCSGEAVFAN 295
+ +S + IN + KS R + Q E ++ P+ P K+ +Q SGEA++ +
Sbjct: 614 VDVSPKEINNV-KSDLHGNDRILESSKQVIEISEDYLPVGLPAKKVGAELQASGEAIYVD 672
Query: 296 DLPKQSSEVFGAFVTADTTPGSIIKDFDTEEAFKIPGVIAFYTAKNIPGINSFVPISIPF 475
D+P + GAFV + T P + +K + + + +A TAK+IP S V + F
Sbjct: 673 DIPSPKDCLHGAFVYS-TKPLAHVKSIELNPSLEQLKTVAIVTAKDIPKGGSNVGANTIF 731
Query: 476 AIENEELLCEKTVKYYGQPAAIIVADREKTANKAAGLVKIKYDFVNKEKPLLTIDEVLNS 655
E L + ++ G+P I+VA+ +KTAN AA + Y N + P+L+I+E + S
Sbjct: 732 G--PEPLFGDPLTQWAGEPLGIVVAETQKTANIAASRALVDYSMENLDAPILSIEEAVRS 789
>10_01_0217 + 2337950-2338085,2340766-2342436,2342636-2342898,
2343027-2343236,2343436-2343654,2344038-2345000,
2345279-2345374,2345482-2345580,2345953-2346142,
2346594-2346823
Length = 1358
Score = 76.6 bits (180), Expect = 2e-14
Identities = 43/144 (29%), Positives = 77/144 (53%)
Frame = +2
Query: 218 EVWPLNQPVPKLEVLVQCSGEAVFANDLPKQSSEVFGAFVTADTTPGSIIKDFDTEEAFK 397
E P+ +P+ K+ +Q SGEAV+ +D+P ++GAF+ + T P + IK + +
Sbjct: 584 EYKPVGKPIKKVGAELQASGEAVYVDDIPAPKDCLYGAFIYS-THPHAHIKGVNFRSSLA 642
Query: 398 IPGVIAFYTAKNIPGINSFVPISIPFAIENEELLCEKTVKYYGQPAAIIVADREKTANKA 577
VI TAK+IP V P + +E L + ++ GQ +++A+ +K A A
Sbjct: 643 SQKVITVITAKDIPTGGENVGSCFPM-LGDEALFADPVAEFAGQNIGVVIAETQKYAYMA 701
Query: 578 AGLVKIKYDFVNKEKPLLTIDEVL 649
A I+Y+ N + P+LT+++ +
Sbjct: 702 ARQAVIEYNTENLQPPILTVEDAV 725
>03_06_0253 - 32666152-32666360,32666443-32666632,32666764-32666862,
32666999-32667094,32667408-32668361,32668683-32668901,
32669282-32669491,32669617-32669879,32670041-32671717,
32672702-32672852
Length = 1355
Score = 76.6 bits (180), Expect = 2e-14
Identities = 44/144 (30%), Positives = 75/144 (52%)
Frame = +2
Query: 218 EVWPLNQPVPKLEVLVQCSGEAVFANDLPKQSSEVFGAFVTADTTPGSIIKDFDTEEAFK 397
E P+ +P+ K +Q SGEAV+ +D+P ++GAF+ + T P + IKD + +
Sbjct: 591 EYKPVGKPIEKTGAELQASGEAVYVDDIPAPKDCLYGAFIYS-THPHAHIKDINFRSSLA 649
Query: 398 IPGVIAFYTAKNIPGINSFVPISIPFAIENEELLCEKTVKYYGQPAAIIVADREKTANKA 577
VI TAK+IP + P + +E L ++ GQ +++A+ +K A A
Sbjct: 650 SQKVITVITAKDIPTGGENIGSCFPM-LGDEALFVHPVSEFAGQNIGVVIAETQKYAYMA 708
Query: 578 AGLVKIKYDFVNKEKPLLTIDEVL 649
A I+Y N + P+LTI++ +
Sbjct: 709 AKQAVIEYSTENLQPPILTIEDAV 732
>03_04_0157 + 17791540-17791681,17792809-17792908,17793386-17793477,
17793562-17793620,17794135-17795637,17796478-17796720,
17796831-17797145,17797571-17797573,17798399-17798638,
17798975-17799259,17799335-17799556,17800105-17800266,
17800411-17800545,17802452-17802688,17802787-17802960,
17803692-17803934
Length = 1384
Score = 72.9 bits (171), Expect = 2e-13
Identities = 55/203 (27%), Positives = 93/203 (45%), Gaps = 9/203 (4%)
Frame = +2
Query: 74 YRKMLALALYYKAILSLSSE-SINPIYKSGGEVIK--------RSVSHGTQSFETDKEVW 226
+R L L+ ++K L ++ E +I +K G R V GTQ +E ++
Sbjct: 559 FRSSLTLSFFFKFFLHVTHEMNIKGFWKDGLHATNLSAIQSFTRPVGVGTQCYELVRQGT 618
Query: 227 PLNQPVPKLEVLVQCSGEAVFANDLPKQSSEVFGAFVTADTTPGSIIKDFDTEEAFKIPG 406
+ QPV ++Q +GEA + +D P + + A V + T + I D A PG
Sbjct: 619 AVGQPVVHTSAMLQVTGEAEYTDDTPTPPNTLHAALVLS-TKAHARILSIDASLAKSSPG 677
Query: 407 VIAFYTAKNIPGINSFVPISIPFAIENEELLCEKTVKYYGQPAAIIVADREKTANKAAGL 586
+ +K++PG N P+ I +EE+ V GQ ++VAD A AA
Sbjct: 678 FAGLFLSKDVPGANHTGPV-----IHDEEVFASDVVTCVGQIVGLVVADTRDNAKAAANK 732
Query: 587 VKIKYDFVNKEKPLLTIDEVLNS 655
V I+Y ++ +L+I+E + +
Sbjct: 733 VNIEY---SELPAILSIEEAVKA 752
>07_01_1149 +
10789733-10791209,10791326-10791588,10791745-10791954,
10792398-10792475,10792505-10792705,10792768-10792908,
10794749-10795714,10797824-10797919,10798450-10798638,
10798849-10798956
Length = 1242
Score = 70.1 bits (164), Expect = 1e-12
Identities = 38/149 (25%), Positives = 78/149 (52%)
Frame = +2
Query: 209 TDKEVWPLNQPVPKLEVLVQCSGEAVFANDLPKQSSEVFGAFVTADTTPGSIIKDFDTEE 388
+D E P+ P+ K +V VQ SGEA++ +D+P + ++G F+ + T P + +K +
Sbjct: 471 SDDEYTPVGDPIKKYKVEVQASGEAIYVDDIPAPKNCLYGEFIYS-TQPLANVKSIKFKP 529
Query: 389 AFKIPGVIAFYTAKNIPGINSFVPISIPFAIENEELLCEKTVKYYGQPAAIIVADREKTA 568
+ +I +AK+IP + + F + E L + ++ GQ +++A+ + A
Sbjct: 530 SLASKKIITVVSAKDIPTGGRNIGSTFWFG-DEEPLFGDPIAEFAGQVLGVVIAETQPYA 588
Query: 569 NKAAGLVKIKYDFVNKEKPLLTIDEVLNS 655
+ AA ++Y + P+LT+++ + S
Sbjct: 589 DMAAKQAVVEYTTDGLKAPILTVEQAVQS 617
>03_06_0252 - 32656068-32656276,32656361-32656550,32656682-32656780,
32656917-32657012,32657200-32658153,32658476-32658694,
32658911-32659120,32659241-32659503,32659605-32661281,
32663639-32663792
Length = 1356
Score = 67.7 bits (158), Expect = 8e-12
Identities = 40/144 (27%), Positives = 73/144 (50%)
Frame = +2
Query: 218 EVWPLNQPVPKLEVLVQCSGEAVFANDLPKQSSEVFGAFVTADTTPGSIIKDFDTEEAFK 397
E P+ +P+ K +Q SGEAV+ +D+ ++GAF+ + T P + IK + +
Sbjct: 592 EYRPIGKPIEKTGAELQASGEAVYVDDISAPKDCLYGAFIYS-THPHAHIKGVNFRSSLA 650
Query: 398 IPGVIAFYTAKNIPGINSFVPISIPFAIENEELLCEKTVKYYGQPAAIIVADREKTANKA 577
VI T K+IP + P + +E L + ++ GQ +++A+ +K A A
Sbjct: 651 SQKVITVITLKDIPTNGKNIGSCSPM-LGDEALFVDPVSEFAGQNIGVVIAETQKYAYMA 709
Query: 578 AGLVKIKYDFVNKEKPLLTIDEVL 649
A I+Y N + P+LT+++ +
Sbjct: 710 AKQSVIEYSTENLQPPILTVEDAV 733
>07_01_1146 + 10756897-10757065,10763869-10765521,10765638-10765900,
10766057-10766266,10766818-10767036,10767379-10768344,
10768575-10768670,10768772-10768870,10769349-10769538,
10769623-10769855
Length = 1365
Score = 66.1 bits (154), Expect = 2e-11
Identities = 34/146 (23%), Positives = 77/146 (52%)
Frame = +2
Query: 218 EVWPLNQPVPKLEVLVQCSGEAVFANDLPKQSSEVFGAFVTADTTPGSIIKDFDTEEAFK 397
E P+ P+ K +V +Q SGEA++ +D+P + ++G F+ + T P + +K + +
Sbjct: 589 EYKPVGDPIKKYKVELQASGEAIYVDDIPAPKNCLYGEFIYS-TQPLANVKSIKFKPSLA 647
Query: 398 IPGVIAFYTAKNIPGINSFVPISIPFAIENEELLCEKTVKYYGQPAAIIVADREKTANKA 577
++ +AK+IP + + F + E L + ++ GQ +++A+ ++ A+ A
Sbjct: 648 SKKILTVVSAKDIPTGGRNIGSTFLFG-DEEPLFGDPIAEFAGQALGVVIAETQRYADMA 706
Query: 578 AGLVKIKYDFVNKEKPLLTIDEVLNS 655
A ++Y + P+LT+++ + +
Sbjct: 707 AKQAVVEYTTDGLKAPILTVEQAVQN 732
>01_03_0019 + 11696607-11696953,11697078-11697321
Length = 196
Score = 31.1 bits (67), Expect = 0.84
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = +2
Query: 437 PGINSFVPISIPFAIENEELLCEKTVKYYGQPAAIIVADREKTANKAAGLVKI 595
P + P + P A + E C+KT +YG + ADR ++ GL ++
Sbjct: 22 PAAEAGAPTAAPLANYSLEDACKKTGPHYGLCIVTLSADRSAKSSDTVGLARV 74
>07_01_0985 -
8297560-8297610,8297728-8297939,8298327-8298449,
8298763-8298817,8299940-8300077,8300187-8300261,
8300339-8300398,8301335-8301392,8301948-8302054,
8302484-8302558,8302643-8302838,8304222-8304301,
8308887-8309757,8310672-8310679
Length = 702
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +2
Query: 131 ESINPIYKSGGEVIKRSVSHGTQSFETDKEVW 226
E+ +PI KS +V+K+ +Q + D+EVW
Sbjct: 185 EATSPIKKSAKKVVKKCAKRRSQDDDDDEEVW 216
>03_02_0339 - 7623897-7625837
Length = 646
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +2
Query: 521 YGQPAAIIVADREKTANKAAGLVKIKYDFVNKEKPLLTIDEVLNSPK 661
Y +PAA I+AD + NKAAG+ + ++ + T++ V P+
Sbjct: 55 YERPAARIMADTVRALNKAAGMAARCFQSHSRLRRFFTLNPVSGLPR 101
>01_01_0930 +
7347680-7347886,7348030-7348082,7348175-7348247,
7348493-7348594,7348697-7348798,7348888-7348959,
7349067-7349129,7349210-7349251,7349620-7349679,
7349755-7349865,7350044-7350214,7350392-7350482,
7350571-7350845
Length = 473
Score = 27.9 bits (59), Expect = 7.8
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +2
Query: 137 INPIYKSGGEVIKRSVSHGTQSF-ETDKEVWPLNQPVPKLEVLVQCSGEAVFANDLPKQS 313
+ + K+GG +++ GT S + +K P NQ V ++++Q S EA+ + D+P
Sbjct: 214 VTHVLKAGGAQAISAMAWGTVSCPKVEKIFGPGNQYVTAAKMILQNS-EAMVSIDMPAGP 272
Query: 314 SEV 322
SEV
Sbjct: 273 SEV 275
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,929,444
Number of Sequences: 37544
Number of extensions: 331875
Number of successful extensions: 810
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 781
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 803
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1703141568
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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