Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG1051
(671 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_68| Best HMM Match : No HMM Matches (HMM E-Value=.) 107 6e-24
SB_30599| Best HMM Match : Ald_Xan_dh_C (HMM E-Value=7.7e-35) 107 6e-24
SB_21836| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 1e-11
SB_53911| Best HMM Match : Ald_Xan_dh_C2 (HMM E-Value=0) 51 1e-06
SB_27644| Best HMM Match : Ald_Xan_dh_C (HMM E-Value=3.1e-26) 48 7e-06
SB_28550| Best HMM Match : Fer2_2 (HMM E-Value=2.49992e-42) 42 6e-04
SB_328| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 29 2.6
SB_3064| Best HMM Match : Adhesin_P1 (HMM E-Value=2.3) 29 2.6
SB_38459| Best HMM Match : DUF948 (HMM E-Value=0.63) 29 3.4
SB_42821| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
>SB_68| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 433
Score = 107 bits (258), Expect = 6e-24
Identities = 61/180 (33%), Positives = 102/180 (56%), Gaps = 2/180 (1%)
Frame = +2
Query: 104 YKAILSLSSESINPIYKSGGEVIKRSVSHGTQSFETDKEVWPLNQPVPKLEVLVQCSGEA 283
Y L++ + + +S R++S GTQ++++ E++PL +P+ KL +Q SGEA
Sbjct: 197 YAFYLAMLGDKASARLRSAAVPYTRAISSGTQNYDSHPELYPLTKPMTKLSAKLQASGEA 256
Query: 284 VFANDLPKQSSEVFGAFVTADTTPGSIIKDFDTEEAFKIPGVIAFYTAKNIP--GINSFV 457
+ ND+P Q+ E++ AFV A + I D A +PGV+ F +A +IP G+N+F+
Sbjct: 257 QYTNDIPAQNGELYAAFVLA-SQGNCKIASIDATIAKALPGVVEFMSASSIPQQGVNNFM 315
Query: 458 PISIPFAIENEELLCEKTVKYYGQPAAIIVADREKTANKAAGLVKIKYDFVNKEKPLLTI 637
P + EE+ C V + GQ +I+AD ++ A+KAA VK+ Y + P+L+I
Sbjct: 316 PT----PNDPEEIFCSGEVLFAGQAIGLILADSQRHADKAAEAVKVVYKDI--ATPILSI 369
>SB_30599| Best HMM Match : Ald_Xan_dh_C (HMM E-Value=7.7e-35)
Length = 255
Score = 107 bits (258), Expect = 6e-24
Identities = 61/180 (33%), Positives = 102/180 (56%), Gaps = 2/180 (1%)
Frame = +2
Query: 104 YKAILSLSSESINPIYKSGGEVIKRSVSHGTQSFETDKEVWPLNQPVPKLEVLVQCSGEA 283
Y L++ + + +S R++S GTQ++++ E++PL +P+ KL +Q SGEA
Sbjct: 34 YAFYLAMLGDKASARLRSAAVPYTRAISSGTQNYDSHPELYPLTKPMTKLSAKLQASGEA 93
Query: 284 VFANDLPKQSSEVFGAFVTADTTPGSIIKDFDTEEAFKIPGVIAFYTAKNIP--GINSFV 457
+ ND+P Q+ E++ AFV A + I D A +PGV+ F +A +IP G+N+F+
Sbjct: 94 QYTNDIPAQNGELYAAFVLA-SQGNCKIASIDATIAKALPGVVEFMSASSIPQQGVNNFM 152
Query: 458 PISIPFAIENEELLCEKTVKYYGQPAAIIVADREKTANKAAGLVKIKYDFVNKEKPLLTI 637
P + EE+ C V + GQ +I+AD ++ A+KAA VK+ Y + P+L+I
Sbjct: 153 PT----PNDPEEIFCSGEVLFAGQAIGLILADSQRHADKAAEAVKVVYKDI--ATPILSI 206
>SB_21836| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 67.3 bits (157), Expect = 1e-11
Identities = 33/90 (36%), Positives = 58/90 (64%), Gaps = 2/90 (2%)
Frame = +2
Query: 74 YRKMLALALYYKA-ILSLSSESINPIYKSGGEVI-KRSVSHGTQSFETDKEVWPLNQPVP 247
Y K L +L+YK + +L S++ + + + G+++ +R+VS G QSF+T +P+++P+P
Sbjct: 73 YHKNLTKSLFYKFYVAALGSDASSRVRSAAGKILHERAVSSGRQSFDTKPARYPVSKPIP 132
Query: 248 KLEVLVQCSGEAVFANDLPKQSSEVFGAFV 337
KL +Q SGEA + +D+P E+ AFV
Sbjct: 133 KLASKLQASGEAQYTDDIPFVDGELHAAFV 162
>SB_53911| Best HMM Match : Ald_Xan_dh_C2 (HMM E-Value=0)
Length = 817
Score = 50.8 bits (116), Expect = 1e-06
Identities = 31/97 (31%), Positives = 52/97 (53%)
Frame = +2
Query: 359 SIIKDFDTEEAFKIPGVIAFYTAKNIPGINSFVPISIPFAIENEELLCEKTVKYYGQPAA 538
++ D EA K+PGV AF +A ++PG N P+ I +E + V GQ
Sbjct: 54 NVRSSIDASEAVKMPGVQAFVSADDVPGCNKSGPV-----IPDELVFYNHEVTSTGQAIG 108
Query: 539 IIVADREKTANKAAGLVKIKYDFVNKEKPLLTIDEVL 649
+VA+ + A +AA VKI+Y+ + + +LTI++ +
Sbjct: 109 AVVAETQAQAQRAAKAVKIEYEDLPR---ILTIEDAI 142
>SB_27644| Best HMM Match : Ald_Xan_dh_C (HMM E-Value=3.1e-26)
Length = 274
Score = 48.0 bits (109), Expect = 7e-06
Identities = 29/98 (29%), Positives = 52/98 (53%)
Frame = +2
Query: 311 SSEVFGAFVTADTTPGSIIKDFDTEEAFKIPGVIAFYTAKNIPGINSFVPISIPFAIENE 490
+ E++ A V +D P + I D +A + GV AFY+A ++ +++ + ++ E
Sbjct: 31 AGELYVARVLSDR-PHAKILSVDASKAVAVHGVYAFYSAADLASVDNNFGL-----LDKE 84
Query: 491 ELLCEKTVKYYGQPAAIIVADREKTANKAAGLVKIKYD 604
EL V + GQ ++ AD + A+ AA LVK+ Y+
Sbjct: 85 ELFATDEVVFVGQTIGVVAADCKGVADSAAKLVKVTYE 122
>SB_28550| Best HMM Match : Fer2_2 (HMM E-Value=2.49992e-42)
Length = 1644
Score = 41.5 bits (93), Expect = 6e-04
Identities = 44/139 (31%), Positives = 69/139 (49%), Gaps = 29/139 (20%)
Frame = +2
Query: 326 GAFVTADTTPGSIIKDFDTEEAFKIPGVIAFYTAKNIP--GINSF-------------VP 460
GAFVT+ T + F T K+PGV+ F++A +IP G+NSF +P
Sbjct: 1195 GAFVTS-TVVCELYGAFVTSTV-KMPGVVRFFSAADIPANGVNSFGFFNAPGPKEGVILP 1252
Query: 461 ISIPFAI---------ENEELL-----CEKTVKYYGQPAAIIVADREKTANKAAGLVKIK 598
S I EN +++ CEK V Y G +IVAD + A++AA V I+
Sbjct: 1253 SSFNQIIHLLINHAGRENIDIILYQIFCEKDVLYVGHVIGLIVADTQLHADEAAEKVNIE 1312
Query: 599 YDFVNKEKPLLTIDEVLNS 655
Y ++ + P+L+I + + +
Sbjct: 1313 Y--LDAKPPILSIKDAIEA 1329
Score = 33.5 bits (73), Expect = 0.16
Identities = 15/35 (42%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +2
Query: 266 QCSGEAVFANDLPKQSSEVFGAFVTADTT-PGSII 367
+ SGEA + ND+P Q E++GA VT+ G+I+
Sbjct: 780 KASGEAQYTNDIPVQVGELYGAIVTSTVVCDGAIV 814
>SB_328| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 334
Score = 30.7 bits (66), Expect = 1.1
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Frame = +2
Query: 167 VIKRSVSHGTQSFETDKEVWPLNQPVPKLEVLVQCSGEAVFA-NDLPKQSSEVFGAFVTA 343
V++R S QS + V+PLN P+ E+ +Q VF + S +G V
Sbjct: 255 VLRRRHSAPVQSQPQLQIVYPLNDPIRHPELRLQQQRRGVFTRGPIIPPPSAFYGGEVET 314
Query: 344 DTTPG-SIIKDFDTEEAFKI 400
D T G S++ D+++ I
Sbjct: 315 DVTDGVSVMSSSDSDKHHSI 334
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +2
Query: 338 TADTTPGSIIKDFDTEEAFKIPGVIAFYTAKNIPGINSFVPISIP 472
TA+ GS+ + EE +IP A AK +P +N F P+S P
Sbjct: 767 TAEQFEGSVQSNVKKEE--EIPPPEAGLLAKPVPAVNLFSPVSSP 809
>SB_3064| Best HMM Match : Adhesin_P1 (HMM E-Value=2.3)
Length = 353
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/87 (21%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Frame = +2
Query: 290 ANDLPKQSSEVFGAFVTADTTPGSIIKDFDTEEAFKIPGVIAFYTAK-NIPGINSFVPIS 466
+ + P++ ++ F A +T +TTPG + + F++PG A+ N+P ++ +
Sbjct: 214 SKETPQRINDNFPAGIT-NTTPGQAYTETPRRDKFRVPGTPGQNIAESNVPNVSPISRRT 272
Query: 467 IPFAIENEELLCEKTVKYYGQPAAIIV 547
P I+ L + +K+ P ++
Sbjct: 273 SP-TIQTPVLAAAQNLKHGKVPCLCVL 298
>SB_38459| Best HMM Match : DUF948 (HMM E-Value=0.63)
Length = 276
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/59 (23%), Positives = 26/59 (44%)
Frame = +1
Query: 328 CIRYSRHNARKYY*GF*YRRSFQNTWSYCFLHSQKHTRH*LLCTNIYSICYRKRRITMR 504
C+RY + R Y Y + + CF + + R+ +C Y +C R ++ +R
Sbjct: 20 CVRYYKVCVRYYKVCIRYYKVCFRYYKVCFRYYKVCVRYYKVCVRYYKVCVRYYKVCIR 78
>SB_42821| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 239
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +2
Query: 116 LSLSSESINPIYKSGGEVIKRSVSHGTQSFETDKEVWPLNQPVPKLEVLVQCSG 277
+ S ++ I K+ + + S GT+SF T +PL P L+ ++C+G
Sbjct: 83 IGFSEAQLSVIRKTVSDALAIVASEGTESFSTPGSAFPLGLDRP-LDEALECTG 135
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,935,366
Number of Sequences: 59808
Number of extensions: 408808
Number of successful extensions: 1164
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1158
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1721264831
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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