BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= P5PG1050 (674 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_42352| Best HMM Match : No HMM Matches (HMM E-Value=.) 120 1e-27 SB_12802| Best HMM Match : Aldedh (HMM E-Value=0) 52 6e-07 SB_32909| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 7e-06 SB_37963| Best HMM Match : Aldedh (HMM E-Value=1.8e-16) 44 9e-05 SB_25829| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04 SB_58786| Best HMM Match : Aldedh (HMM E-Value=0) 42 6e-04 SB_57708| Best HMM Match : Aldedh (HMM E-Value=0) 41 0.001 SB_10421| Best HMM Match : Guanylate_cyc (HMM E-Value=0) 41 0.001 SB_5072| Best HMM Match : Aldedh (HMM E-Value=2.4e-14) 40 0.001 SB_14243| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.013 SB_15907| Best HMM Match : Aldedh (HMM E-Value=3.2e-23) 36 0.023 SB_26122| Best HMM Match : Aldedh (HMM E-Value=0) 36 0.023 SB_55427| Best HMM Match : E-MAP-115 (HMM E-Value=0.077) 31 0.85 SB_18027| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6 SB_325| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6 SB_5253| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4 SB_38362| Best HMM Match : BRCT (HMM E-Value=0) 28 6.0 SB_31305| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9 >SB_42352| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 749 Score = 120 bits (288), Expect = 1e-27 Identities = 54/129 (41%), Positives = 83/129 (64%) Frame = +3 Query: 288 LLRMYEENQNVMVEALHKDLRRSKMEAILLEVDYLINDLRNTLHYLDEWTKPEHPPKGFV 467 ++++ +++++ +V AL KDL + + E ++ E+ ND L L EW KP+ G V Sbjct: 1 MVQLLDKHEDEIVAALKKDLCKPRQETVIAEILLAKNDAILALEKLSEWMKPQPVETGIV 60 Query: 468 NILDEVVIYNDPYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKPSELSVACSNFVVE 647 N +D I N+P GV L+I AWNYP+QL+ LP+ GAIA GN ++KPSE++ A + V + Sbjct: 61 NKMDTCYIKNEPLGVALIISAWNYPVQLIFLPLVGAIAGGNCAVLKPSEVASATAQLVAD 120 Query: 648 NLPKYLDND 674 +PKYLD D Sbjct: 121 LVPKYLDPD 129 >SB_12802| Best HMM Match : Aldedh (HMM E-Value=0) Length = 880 Score = 51.6 bits (118), Expect = 6e-07 Identities = 23/41 (56%), Positives = 29/41 (70%) Frame = +3 Query: 498 DPYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKPSELS 620 +P GVV IGAWNYP+Q +A AIA GNT++ KPS L+ Sbjct: 409 EPLGVVGGIGAWNYPIQTACWKIAPAIACGNTIVYKPSPLT 449 >SB_32909| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1411 Score = 48.0 bits (109), Expect = 7e-06 Identities = 38/146 (26%), Positives = 68/146 (46%) Frame = +3 Query: 174 TTSKQKTMSAAEAVQKARDTFNRGTTRPIEWRRQQLKNLLRMYEENQNVMVEALHKDLRR 353 +T++ +T +AV+ AR F + P R + L ++ R +++ ++ D + Sbjct: 672 STTQGETQDIEDAVKAARTAFQSWSKLPGHARARHLYSIARHVQKHARLIAVLESMDNGK 731 Query: 354 SKMEAILLEVDYLINDLRNTLHYLDEWTKPEHPPKGFVNILDEVVIYNDPYGVVLVIGAW 533 S E ++ N R+ H+ G+ ++D + P GVV I W Sbjct: 732 SVRETRDCDIP---NVARHLYHHA-----------GWAQLMDTEMQGWKPVGVVGGIVPW 777 Query: 534 NYPLQLLLLPMAGAIAAGNTVIVKPS 611 N+PL LL + A+A GNTV++KP+ Sbjct: 778 NFPLMLLCWKVCPALAMGNTVVLKPA 803 Score = 30.7 bits (66), Expect = 1.1 Identities = 20/65 (30%), Positives = 31/65 (47%) Frame = +3 Query: 420 YLDEWTKPEHPPKGFVNILDEVVIYNDPYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVI 599 + D+ TKPE P + ++P GV+ + L + +A AI GNTV+ Sbjct: 1269 FSDKDTKPEETP-----FYGATIKIHEPVGVIGIACPDECSLLAFVSLLAPAIIRGNTVV 1323 Query: 600 VKPSE 614 + PSE Sbjct: 1324 IVPSE 1328 >SB_37963| Best HMM Match : Aldedh (HMM E-Value=1.8e-16) Length = 266 Score = 44.4 bits (100), Expect = 9e-05 Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 4/55 (7%) Frame = +3 Query: 468 NILDEVVIYN----DPYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKPSELS 620 N L+ + N P GV +I WN PL LL +A A+A+G TV+ KPSE++ Sbjct: 131 NFLESQAVVNYSLRSPKGVAGLISPWNLPLYLLSFKIAPAVASGCTVVCKPSEMT 185 >SB_25829| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 826 Score = 44.0 bits (99), Expect = 1e-04 Identities = 18/40 (45%), Positives = 28/40 (70%) Frame = +3 Query: 495 NDPYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKPSE 614 ++P G+V I WN+PL + + +A A+A GN VI+KP+E Sbjct: 465 HEPVGLVGAITPWNFPLNMASVKIAPALACGNVVILKPAE 504 >SB_58786| Best HMM Match : Aldedh (HMM E-Value=0) Length = 421 Score = 41.5 bits (93), Expect = 6e-04 Identities = 18/44 (40%), Positives = 28/44 (63%) Frame = +3 Query: 480 EVVIYNDPYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKPS 611 +V+I +P GV I WN+P+ +L+ + AIA G T+I +PS Sbjct: 74 KVLITKEPVGVCASITPWNFPIAMLVRKASSAIACGCTMIARPS 117 >SB_57708| Best HMM Match : Aldedh (HMM E-Value=0) Length = 528 Score = 40.7 bits (91), Expect = 0.001 Identities = 18/40 (45%), Positives = 26/40 (65%) Frame = +3 Query: 513 VLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKPSELSVACS 632 +L WN+PL ++ A A+AAG TVI+KPSE + C+ Sbjct: 143 LLTTEQWNFPLGMITRKAAAALAAGCTVIIKPSEETPFCA 182 >SB_10421| Best HMM Match : Guanylate_cyc (HMM E-Value=0) Length = 1485 Score = 40.7 bits (91), Expect = 0.001 Identities = 19/40 (47%), Positives = 27/40 (67%) Frame = +3 Query: 495 NDPYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKPSE 614 ++P GVV I WN+PL + L +A A+A G VI+KP+E Sbjct: 1335 HEPVGVVGAITPWNFPLLMEGLKLAPALACGCVVILKPAE 1374 >SB_5072| Best HMM Match : Aldedh (HMM E-Value=2.4e-14) Length = 266 Score = 40.3 bits (90), Expect = 0.001 Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 5/143 (3%) Frame = +3 Query: 201 AAEAVQKARDTFNRGTTRPIEWRRQQLKNLLRMYEENQNVMVEALHKDLRRSKMEAILLE 380 A A ++A D +P+E R++ L N + E+N ++ E D +S + A ++ Sbjct: 86 AVMAARQAFDDSPWSRIKPVE-RQKLLWNFADLIEKNAALLAEIESIDNGKSAVIAEHVD 144 Query: 381 VDYLINDLRNTLHYLDEWTKPE-HPPKGFVNILDEVVIYN----DPYGVVLVIGAWNYPL 545 + ++ LR + TK E + V + + + + GVV I AWN+PL Sbjct: 145 IRLAVDFLRYMAGFA---TKIEGRTVQVSVPFMPDAQFHGYTRREAVGVVGAIVAWNFPL 201 Query: 546 QLLLLPMAGAIAAGNTVIVKPSE 614 L + A+A G T ++KP+E Sbjct: 202 LLACWKLGPALATGCTTVLKPAE 224 >SB_14243| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1507 Score = 37.1 bits (82), Expect = 0.013 Identities = 26/123 (21%), Positives = 53/123 (43%), Gaps = 5/123 (4%) Frame = +3 Query: 96 VSIQIDKVRGSNKSEXXXXXXXXXXLTTSKQKTMSAAEAVQKARDTFNRGTTRPIEWRRQ 275 + +++D ++G ++ E ++ + + A DT +RG +E ++ Sbjct: 97 LQLELDIMKGEHEMEITMLKKEIQAERVRLEQRKAKLDVADDASDTSSRGPYPAVEAIQE 156 Query: 276 QLKNLLRMYEENQNVMVEALHKDLRRS-----KMEAILLEVDYLINDLRNTLHYLDEWTK 440 Q+ +L YEE + E L + + R+ K E + +N+L+NT E + Sbjct: 157 QMSSLQANYEEEIQTVKEQLQEQMLRANEAVEKYEQQEYQFHENLNELKNTFAQEQEMMR 216 Query: 441 PEH 449 EH Sbjct: 217 EEH 219 >SB_15907| Best HMM Match : Aldedh (HMM E-Value=3.2e-23) Length = 275 Score = 36.3 bits (80), Expect = 0.023 Identities = 16/44 (36%), Positives = 25/44 (56%) Frame = +3 Query: 480 EVVIYNDPYGVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKPS 611 E+ +P GVV +I WN+P +A A+A GN ++ KP+ Sbjct: 134 EIETRREPVGVVGIITPWNFPTATGAWKIAPALAFGNAIVWKPA 177 >SB_26122| Best HMM Match : Aldedh (HMM E-Value=0) Length = 462 Score = 36.3 bits (80), Expect = 0.023 Identities = 16/38 (42%), Positives = 26/38 (68%) Frame = +3 Query: 507 GVVLVIGAWNYPLQLLLLPMAGAIAAGNTVIVKPSELS 620 GVV +I +W+ L +L + A+A+GN V++KPS L+ Sbjct: 153 GVVAIITSWSQALPSILRHLVPAMASGNCVVIKPSCLA 190 >SB_55427| Best HMM Match : E-MAP-115 (HMM E-Value=0.077) Length = 599 Score = 31.1 bits (67), Expect = 0.85 Identities = 20/65 (30%), Positives = 34/65 (52%) Frame = +3 Query: 174 TTSKQKTMSAAEAVQKARDTFNRGTTRPIEWRRQQLKNLLRMYEENQNVMVEALHKDLRR 353 TT ++T+ E K + F +G +E RRQ L++ L+ +E + A + +R Sbjct: 81 TTDDKRTIFTFE--DKRKQNFEKGRLE-LEKRRQDLQDKLKREKEEREAKERAEEERRQR 137 Query: 354 SKMEA 368 +KMEA Sbjct: 138 AKMEA 142 >SB_18027| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 218 Score = 29.5 bits (63), Expect = 2.6 Identities = 23/103 (22%), Positives = 50/103 (48%), Gaps = 2/103 (1%) Frame = +3 Query: 180 SKQKTMSAAEAVQKARDTFNR--GTTRPIEWRRQQLKNLLRMYEENQNVMVEALHKDLRR 353 +K+ ++A + ++ N+ GT IE++R+ L+ E +N+ A K L+ Sbjct: 57 NKRTALNALKRKKRLEKQLNQIDGTLSTIEFQREALEGANTNTEVLKNMSYAA--KALKA 114 Query: 354 SKMEAILLEVDYLINDLRNTLHYLDEWTKPEHPPKGFVNILDE 482 + + + +V +++D++ DE ++ P GF +DE Sbjct: 115 AHQQLDVDDVHDMMDDIQEQTELADEISRAISEPAGFGMDIDE 157 >SB_325| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 252 Score = 29.5 bits (63), Expect = 2.6 Identities = 15/36 (41%), Positives = 19/36 (52%) Frame = -2 Query: 655 GRFSTTKFEQATDSSLGFTITVFPAAMAPAIGKSSS 548 G F T F + DSSL + +FP A+ IG SS Sbjct: 6 GEFPTWLFCRFADSSLSYQFFLFPTALESFIGARSS 41 >SB_5253| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 305 Score = 29.1 bits (62), Expect = 3.4 Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 2/56 (3%) Frame = +3 Query: 297 MYEENQNVMVEALHKDLRRSK--MEAILLEVDYLINDLRNTLHYLDEWTKPEHPPK 458 +Y E + KDL S + ++++ YL ++ + + DEW K E PPK Sbjct: 68 LYAERLRLKPTTSSKDLSSSDVFLISVMVASKYLYDEGEDEEVFNDEWAKAEDPPK 123 >SB_38362| Best HMM Match : BRCT (HMM E-Value=0) Length = 1572 Score = 28.3 bits (60), Expect = 6.0 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = -1 Query: 614 FAGFHDNRVPGSDGSGHRQKQQ 549 F +NR PG+DG G R K Q Sbjct: 474 FPSLKENREPGADGKGKRSKTQ 495 >SB_31305| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 313 Score = 27.9 bits (59), Expect = 7.9 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%) Frame = -3 Query: 225 ELFGRPQQLTSSFVWML*DSRFHSSYCCFHFYYFRALY--RFVCSH 94 EL + QQ F+W+ S HSS+ +YY +L RFV S+ Sbjct: 263 ELKRKQQQEVDIFIWLDHSSCDHSSFTLIGYYYSVSLQIDRFVSSN 308 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 20,505,894 Number of Sequences: 59808 Number of extensions: 407230 Number of successful extensions: 1210 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 1140 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1208 length of database: 16,821,457 effective HSP length: 80 effective length of database: 12,036,817 effective search space used: 1733301648 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -