Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG1050
         (674 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    25   0.66 
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    24   1.5  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    24   1.5  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    24   1.5  
AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc fi...    23   2.7  
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    22   4.7  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   6.1  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    22   6.1  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   6.1  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 25.0 bits (52), Expect = 0.66
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -1

Query: 608 GFHDNRVPGSDGSGHRQKQQLQGI 537
           G H N  P S  SG +Q+  LQG+
Sbjct: 812 GLHINSSPSSVQSGQQQQSVLQGL 835


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +2

Query: 239 SRHNQADRMAPSAAQEFVKNVRGKPKRH 322
           +RH +AD    S + E   N R  P+ H
Sbjct: 242 TRHREADDAEESVSSETNHNERSTPRSH 269


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +2

Query: 239 SRHNQADRMAPSAAQEFVKNVRGKPKRH 322
           +RH +AD    S + E   N R  P+ H
Sbjct: 242 TRHREADDAEESVSSETNHNERSTPRSH 269


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +2

Query: 239 SRHNQADRMAPSAAQEFVKNVRGKPKRH 322
           +RH +AD    S + E   N R  P+ H
Sbjct: 242 TRHREADDAEESVSSETNHNERSTPRSH 269


>AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc
           finger domain-Z3 isoform protein.
          Length = 92

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 227 RHFQSRHNQADRM 265
           RHFQ +H Q+D +
Sbjct: 23  RHFQDKHEQSDTL 35


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +3

Query: 447 HPPKGFVNILDEVVIYNDP 503
           +PPKG  +   +V++ N P
Sbjct: 332 NPPKGAADFTAQVIVLNHP 350


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +2

Query: 212 RPKSSRHFQSRHNQADRMAPSAAQEFVKNVRGKPK 316
           RPK  +    +  Q D  AP+A +  V+ V  KP+
Sbjct: 365 RPKLRKDMYEKMVQVDPTAPNAEERRVQGVT-KPR 398


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +2

Query: 212 RPKSSRHFQSRHNQADRMAPSAAQEFVKNVRGKPK 316
           RPK  +    +  Q D  AP+A +  V+ V  KP+
Sbjct: 280 RPKLRKDMYEKMVQVDPTAPNAEERRVQGVT-KPR 313


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +2

Query: 212 RPKSSRHFQSRHNQADRMAPSAAQEFVKNVRGKPK 316
           RPK  +    +  Q D  AP+A +  V+ V  KP+
Sbjct: 599 RPKLRKDMYEKMVQVDPTAPNAEERRVQGVT-KPR 632


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,472
Number of Sequences: 438
Number of extensions: 3628
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20464920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)