Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG1049
         (558 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    25   0.58 
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    25   0.58 
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   5.4  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   5.4  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   7.2  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   7.2  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   7.2  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          21   9.5  

>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 24.6 bits (51), Expect = 0.58
 Identities = 20/66 (30%), Positives = 33/66 (50%)
 Frame = -3

Query: 232 LTLWLINANKYKLFL*NQEKNYLKTLKKCSKDTLQNRK*NCDQIVYYTHIYLFLLKM*IN 53
           +TLWL N N   L L  ++ N L   K  + D  + RK +  Q++    I+L  +    N
Sbjct: 143 VTLWLSNVNSLTLTLKRKKWNLL--FKTLTHD--EPRKSSLVQLILTQAIFLMFVS--YN 196

Query: 52  IFLIET 35
           I++ +T
Sbjct: 197 IYVCQT 202


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 24.6 bits (51), Expect = 0.58
 Identities = 20/66 (30%), Positives = 33/66 (50%)
 Frame = -3

Query: 232 LTLWLINANKYKLFL*NQEKNYLKTLKKCSKDTLQNRK*NCDQIVYYTHIYLFLLKM*IN 53
           +TLWL N N   L L  ++ N L   K  + D  + RK +  Q++    I+L  +    N
Sbjct: 69  VTLWLSNVNSLTLTLKRKKWNLL--FKTLTHD--EPRKSSLVQLILTQAIFLMFVS--YN 122

Query: 52  IFLIET 35
           I++ +T
Sbjct: 123 IYVCQT 128


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 97  KQFDHSFIYGSVMYLCYT 150
           K F   F+   VM+LCY+
Sbjct: 135 KNFYFWFVLKQVMFLCYS 152


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +2

Query: 314 FSKLL*VIYEKCKNHHF*FAD*FGVKFNFEYTYHLNNFV 430
           FS L  V   KC+N+       F  +F++ +TY   N V
Sbjct: 161 FSMLNYVYSSKCENNSTGVEHFFKKQFHYIFTYMPYNIV 199


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 127 SVMYLCYTFLRFS 165
           S  Y+CY F +FS
Sbjct: 140 SATYICYAFGKFS 152


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 127 SVMYLCYTFLRFS 165
           S  Y+CY F +FS
Sbjct: 373 SATYICYAFGKFS 385


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 127 SVMYLCYTFLRFS 165
           S  Y+CY F +FS
Sbjct: 373 SATYICYAFGKFS 385


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 351 LHFSYMTYNNLEN 313
           LHF  M+Y+  EN
Sbjct: 5   LHFDEMSYSQFEN 17


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,609
Number of Sequences: 336
Number of extensions: 2238
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13681771
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)