Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG1049
         (558 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U24105-1|AAB70879.1| 1224|Homo sapiens coatomer protein protein.       30   6.3  
BC038447-1|AAH38447.1| 1233|Homo sapiens COPA protein protein.         30   6.3  
AL513282-3|CAI12455.1| 1233|Homo sapiens coatomer protein comple...    30   6.3  
AL513282-2|CAI12454.1| 1224|Homo sapiens coatomer protein comple...    30   6.3  
AL445230-2|CAI15004.1| 1233|Homo sapiens coatomer protein comple...    30   6.3  
AL445230-1|CAI15005.1| 1224|Homo sapiens coatomer protein comple...    30   6.3  
BC063575-1|AAH63575.1|  391|Homo sapiens PLEKHA9 protein protein.      29   8.4  
AF380162-1|AAK55424.1|  507|Homo sapiens phosphoinositol 4-phosp...    29   8.4  
AF103731-1|AAC97956.1|  391|Homo sapiens putative glycolipid tra...    29   8.4  

>U24105-1|AAB70879.1| 1224|Homo sapiens coatomer protein protein.
          Length = 1224

 Score = 29.9 bits (64), Expect = 6.3
 Identities = 16/44 (36%), Positives = 26/44 (59%)
 Frame = -3

Query: 154  KKCSKDTLQNRK*NCDQIVYYTHIYLFLLKM*INIFLIETSLSL 23
            KK  K+TL+ +K  C+   Y+TH  L  + M   I ++ T+L+L
Sbjct: 1071 KKLPKETLEQQKRICEMAAYFTHSNLQPVHM---ILVLRTALNL 1111


>BC038447-1|AAH38447.1| 1233|Homo sapiens COPA protein protein.
          Length = 1233

 Score = 29.9 bits (64), Expect = 6.3
 Identities = 16/44 (36%), Positives = 26/44 (59%)
 Frame = -3

Query: 154  KKCSKDTLQNRK*NCDQIVYYTHIYLFLLKM*INIFLIETSLSL 23
            KK  K+TL+ +K  C+   Y+TH  L  + M   I ++ T+L+L
Sbjct: 1080 KKLPKETLEQQKRICEMAAYFTHSNLQPVHM---ILVLRTALNL 1120


>AL513282-3|CAI12455.1| 1233|Homo sapiens coatomer protein complex,
            subunit alpha protein.
          Length = 1233

 Score = 29.9 bits (64), Expect = 6.3
 Identities = 16/44 (36%), Positives = 26/44 (59%)
 Frame = -3

Query: 154  KKCSKDTLQNRK*NCDQIVYYTHIYLFLLKM*INIFLIETSLSL 23
            KK  K+TL+ +K  C+   Y+TH  L  + M   I ++ T+L+L
Sbjct: 1080 KKLPKETLEQQKRICEMAAYFTHSNLQPVHM---ILVLRTALNL 1120


>AL513282-2|CAI12454.1| 1224|Homo sapiens coatomer protein complex,
            subunit alpha protein.
          Length = 1224

 Score = 29.9 bits (64), Expect = 6.3
 Identities = 16/44 (36%), Positives = 26/44 (59%)
 Frame = -3

Query: 154  KKCSKDTLQNRK*NCDQIVYYTHIYLFLLKM*INIFLIETSLSL 23
            KK  K+TL+ +K  C+   Y+TH  L  + M   I ++ T+L+L
Sbjct: 1071 KKLPKETLEQQKRICEMAAYFTHSNLQPVHM---ILVLRTALNL 1111


>AL445230-2|CAI15004.1| 1233|Homo sapiens coatomer protein complex,
            subunit alpha protein.
          Length = 1233

 Score = 29.9 bits (64), Expect = 6.3
 Identities = 16/44 (36%), Positives = 26/44 (59%)
 Frame = -3

Query: 154  KKCSKDTLQNRK*NCDQIVYYTHIYLFLLKM*INIFLIETSLSL 23
            KK  K+TL+ +K  C+   Y+TH  L  + M   I ++ T+L+L
Sbjct: 1080 KKLPKETLEQQKRICEMAAYFTHSNLQPVHM---ILVLRTALNL 1120


>AL445230-1|CAI15005.1| 1224|Homo sapiens coatomer protein complex,
            subunit alpha protein.
          Length = 1224

 Score = 29.9 bits (64), Expect = 6.3
 Identities = 16/44 (36%), Positives = 26/44 (59%)
 Frame = -3

Query: 154  KKCSKDTLQNRK*NCDQIVYYTHIYLFLLKM*INIFLIETSLSL 23
            KK  K+TL+ +K  C+   Y+TH  L  + M   I ++ T+L+L
Sbjct: 1071 KKLPKETLEQQKRICEMAAYFTHSNLQPVHM---ILVLRTALNL 1111


>BC063575-1|AAH63575.1|  391|Homo sapiens PLEKHA9 protein protein.
          Length = 391

 Score = 29.5 bits (63), Expect = 8.4
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = -2

Query: 197 TIFVKSRKELFENLKKV*QRYIT 129
           T+F   + +L EN+KKV Q+YIT
Sbjct: 236 TVFAPVKMDLVENIKKVNQKYIT 258


>AF380162-1|AAK55424.1|  507|Homo sapiens phosphoinositol
           4-phosphate adaptor protein-2 protein.
          Length = 507

 Score = 29.5 bits (63), Expect = 8.4
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = -2

Query: 197 TIFVKSRKELFENLKKV*QRYIT 129
           T+F   + +L EN+KKV Q+YIT
Sbjct: 352 TVFAPVKMDLVENIKKVNQKYIT 374


>AF103731-1|AAC97956.1|  391|Homo sapiens putative glycolipid
           transfer protein protein.
          Length = 391

 Score = 29.5 bits (63), Expect = 8.4
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = -2

Query: 197 TIFVKSRKELFENLKKV*QRYIT 129
           T+F   + +L EN+KKV Q+YIT
Sbjct: 236 TVFAPVKMDLVENIKKVNQKYIT 258


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,796,320
Number of Sequences: 237096
Number of extensions: 1076075
Number of successful extensions: 1051
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1046
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1051
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5590411794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)