Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG1048
         (631 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF003740-7|AAC48142.2|  625|Caenorhabditis elegans Hypothetical ...    29   3.6  
AC024880-3|AAF60915.3|  675|Caenorhabditis elegans Hypothetical ...    28   6.3  
Z72512-8|CAH04717.1|  583|Caenorhabditis elegans Hypothetical pr...    27   8.4  
Z72512-7|CAA96668.3|  568|Caenorhabditis elegans Hypothetical pr...    27   8.4  
AL023835-10|CAA19494.2|  691|Caenorhabditis elegans Hypothetical...    27   8.4  

>AF003740-7|AAC48142.2|  625|Caenorhabditis elegans Hypothetical
           protein C41D11.7 protein.
          Length = 625

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = -3

Query: 620 FVKAQRPFYAGLSPIGYPAVETDLLSNRFGEDEEAPIEVRGDGNLIN 480
           F  A+R F+   +  G     TD +SN FG+D E+ +    D  +IN
Sbjct: 521 FKNAKRRFHPN-NAFGEDGNVTDYVSNNFGQDLESFMNYSNDEEMIN 566


>AC024880-3|AAF60915.3|  675|Caenorhabditis elegans Hypothetical
           protein Y97E10AR.1 protein.
          Length = 675

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
 Frame = -3

Query: 308 ATNSSTVLDVRISIIFF--RNGKLDLIRFVEVYII*QHH*TIEDNMADMN 165
           A ++  +L+  I  IF   +NGKL+ + F E Y I +    I DN+ D++
Sbjct: 588 AFDADDILEQAIDWIFNEPQNGKLEKLEFSERYAIPELQKVITDNILDLD 637


>Z72512-8|CAH04717.1|  583|Caenorhabditis elegans Hypothetical
           protein R07B5.8b protein.
          Length = 583

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 15/56 (26%), Positives = 30/56 (53%)
 Frame = -3

Query: 524 EEAPIEVRGDGNLINRLNSLPIENQPFWYLNWKAYEALRKRPQTFQQRPNNFIDRN 357
           E+ P+E+  D + +N L++LPI       ++  +Y   ++  + F+Q   +  DRN
Sbjct: 97  EDEPMELDSDDDPVNELDNLPI------VIDDPSYVLTKEHKEIFEQVKKSVSDRN 146


>Z72512-7|CAA96668.3|  568|Caenorhabditis elegans Hypothetical
           protein R07B5.8a protein.
          Length = 568

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 15/56 (26%), Positives = 30/56 (53%)
 Frame = -3

Query: 524 EEAPIEVRGDGNLINRLNSLPIENQPFWYLNWKAYEALRKRPQTFQQRPNNFIDRN 357
           E+ P+E+  D + +N L++LPI       ++  +Y   ++  + F+Q   +  DRN
Sbjct: 142 EDEPMELDSDDDPVNELDNLPI------VIDDPSYVLTKEHKEIFEQVKKSVSDRN 191


>AL023835-10|CAA19494.2|  691|Caenorhabditis elegans Hypothetical
           protein Y37A1B.11 protein.
          Length = 691

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 15/50 (30%), Positives = 25/50 (50%)
 Frame = -1

Query: 427 KPMRL*EKDPKPSSKDRTILSIEINKGKKKTQALKIMRRLQQILQQCLMF 278
           +P+R     P P +K R + + EI   K+K  + +  RR Q+  +Q   F
Sbjct: 565 EPVREPTPPPPPPAKPRPLTAAEIAAQKRKAYSEEAWRRYQEYQKQWKKF 614


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,422,804
Number of Sequences: 27780
Number of extensions: 269021
Number of successful extensions: 663
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 649
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 663
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)