Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG1047
         (575 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00006CD2EF Cluster: hypothetical protein TTHERM_0026...    37   0.30 
UniRef50_UPI00006CD2F1 Cluster: hypothetical protein TTHERM_0026...    36   0.52 
UniRef50_Q4Y1R1 Cluster: Putative uncharacterized protein; n=1; ...    33   4.8  
UniRef50_Q7X7B4 Cluster: OSJNBb0021I10.5 protein; n=5; Oryza sat...    33   6.4  
UniRef50_Q94HL7 Cluster: Putative retroelement; n=1; Oryza sativ...    32   8.4  
UniRef50_Q0IYT3 Cluster: Os10g0165400 protein; n=3; Oryza sativa...    32   8.4  

>UniRef50_UPI00006CD2EF Cluster: hypothetical protein TTHERM_00268230;
            n=1; Tetrahymena thermophila SB210|Rep: hypothetical
            protein TTHERM_00268230 - Tetrahymena thermophila SB210
          Length = 1640

 Score = 37.1 bits (82), Expect = 0.30
 Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 6/60 (10%)
 Frame = +2

Query: 77   HKYVYMKCYCHKFCLFFIYTYLVFFDC------MIISNNKKYRIKLLPIFTRYSVMKIIT 238
            + ++Y+K + HKF   F+Y Y VF          ++ N+ +  +K++P+F  Y +  I T
Sbjct: 835  NSFIYLKYWEHKF--LFVYNYTVFLQTQANQQQQLLKNSSEALVKVIPLFAVYKIQMIFT 892


>UniRef50_UPI00006CD2F1 Cluster: hypothetical protein TTHERM_00268250;
            n=1; Tetrahymena thermophila SB210|Rep: hypothetical
            protein TTHERM_00268250 - Tetrahymena thermophila SB210
          Length = 2100

 Score = 36.3 bits (80), Expect = 0.52
 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 6/55 (10%)
 Frame = +2

Query: 77   HKYVYMKCYCHKFCLFFIYTYLVFFDC------MIISNNKKYRIKLLPIFTRYSV 223
            H  VY+K + HKF   F+Y Y +F         +++ N+ +  IK++P+F  Y +
Sbjct: 1205 HSLVYLKYWEHKF--LFVYNYTIFLQTQSSQQQLLLQNSSEAFIKIIPLFAVYKI 1257


>UniRef50_Q4Y1R1 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 62

 Score = 33.1 bits (72), Expect = 4.8
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = +2

Query: 98  CYCHKFCLFFIYTYLVFFDCMIISNNKKYRIKLLPI 205
           C+C     +F++ +L F  C II  N+ +RI LLP+
Sbjct: 28  CFCCTVIFYFLFFFLFFKICSIIC-NRTFRILLLPV 62


>UniRef50_Q7X7B4 Cluster: OSJNBb0021I10.5 protein; n=5; Oryza
           sativa|Rep: OSJNBb0021I10.5 protein - Oryza sativa
           subsp. japonica (Rice)
          Length = 1489

 Score = 32.7 bits (71), Expect = 6.4
 Identities = 18/49 (36%), Positives = 25/49 (51%)
 Frame = -3

Query: 549 VTPEINSFFKHHSSNFGIGFTLFNYVCVLYNGIG*VLLYHIFNLW*FKI 403
           VTP  N FFKH + N   GF +   V V +     +L +H+F +  F I
Sbjct: 315 VTPT-NKFFKHPNGNINEGFGIVQDVPVCFEDRDAILDFHVFEIQHFDI 362


>UniRef50_Q94HL7 Cluster: Putative retroelement; n=1; Oryza
           sativa|Rep: Putative retroelement - Oryza sativa (Rice)
          Length = 743

 Score = 32.3 bits (70), Expect = 8.4
 Identities = 17/49 (34%), Positives = 26/49 (53%)
 Frame = -3

Query: 549 VTPEINSFFKHHSSNFGIGFTLFNYVCVLYNGIG*VLLYHIFNLW*FKI 403
           +TP +N FFKH +     GF +   V V YN    +L +H+F +  F +
Sbjct: 346 ITP-MNKFFKHPNRKLIEGFGIVQDVSVQYNDKEAILDFHVFEIQDFDV 393


>UniRef50_Q0IYT3 Cluster: Os10g0165400 protein; n=3; Oryza sativa
           (japonica cultivar-group)|Rep: Os10g0165400 protein -
           Oryza sativa subsp. japonica (Rice)
          Length = 805

 Score = 32.3 bits (70), Expect = 8.4
 Identities = 17/49 (34%), Positives = 26/49 (53%)
 Frame = -3

Query: 549 VTPEINSFFKHHSSNFGIGFTLFNYVCVLYNGIG*VLLYHIFNLW*FKI 403
           +TP +N FFKH +     GF +   V V YN    +L +H+F +  F +
Sbjct: 361 ITP-MNKFFKHPNRKLIEGFGIVQDVSVQYNDKEAILDFHVFEIQDFDV 408


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 433,824,956
Number of Sequences: 1657284
Number of extensions: 7554007
Number of successful extensions: 18516
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 17301
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18437
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39571085965
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)