Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG1047
         (575 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-1163|AAF54534.2|  287|Drosophila melanogaster CG14688-P...    29   3.4  
AY262004-1|AAP57097.1|  833|Drosophila melanogaster TRP channel ...    29   6.0  
AE014296-2365|AAF49752.2|  833|Drosophila melanogaster CG5842-PA...    29   6.0  

>AE014297-1163|AAF54534.2|  287|Drosophila melanogaster CG14688-PA
           protein.
          Length = 287

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -3

Query: 549 VTPEINSFFKHHSSNFGIGFTLFNYVCVLYNG 454
           VTP  +S+F H   N  +GF L    C L NG
Sbjct: 145 VTPHQDSWFLHTDPNSAVGFWLALEDCTLQNG 176


>AY262004-1|AAP57097.1|  833|Drosophila melanogaster TRP channel
           protein nanchung protein.
          Length = 833

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 9/28 (32%), Positives = 20/28 (71%)
 Frame = -1

Query: 494 VLHYLTMYVFYIMASDKYYYIIFLIYGN 411
           +L ++++Y+ ++M   + +YIIFL + N
Sbjct: 620 LLRFVSIYLVFVMGFSQAFYIIFLTFDN 647


>AE014296-2365|AAF49752.2|  833|Drosophila melanogaster CG5842-PA
           protein.
          Length = 833

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 9/28 (32%), Positives = 20/28 (71%)
 Frame = -1

Query: 494 VLHYLTMYVFYIMASDKYYYIIFLIYGN 411
           +L ++++Y+ ++M   + +YIIFL + N
Sbjct: 620 LLRFVSIYLVFVMGFSQAFYIIFLTFDN 647


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,136,280
Number of Sequences: 53049
Number of extensions: 328363
Number of successful extensions: 624
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 612
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 624
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2276053890
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)