Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG1047
         (575 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82261-5|CAH60756.1|  304|Caenorhabditis elegans Hypothetical pr...    31   0.59 
U23179-4|AAK68209.1|  341|Caenorhabditis elegans Serpentine rece...    31   0.78 
Z81527-2|CAB04270.1|  361|Caenorhabditis elegans Hypothetical pr...    28   5.5  
Z81523-2|CAB04248.1|  928|Caenorhabditis elegans Hypothetical pr...    27   7.2  
Z81523-1|CAB04241.1|  944|Caenorhabditis elegans Hypothetical pr...    27   7.2  
Z93395-2|CAB07705.1|  905|Caenorhabditis elegans Hypothetical pr...    27   9.5  
Z83112-5|CAB05541.1|  905|Caenorhabditis elegans Hypothetical pr...    27   9.5  
Z73972-9|CAB60280.2|  353|Caenorhabditis elegans Hypothetical pr...    27   9.5  
Z71177-10|CAB60279.2|  353|Caenorhabditis elegans Hypothetical p...    27   9.5  

>Z82261-5|CAH60756.1|  304|Caenorhabditis elegans Hypothetical
           protein C35D6.9a protein.
          Length = 304

 Score = 31.1 bits (67), Expect = 0.59
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = +2

Query: 119 LFFIYTYLVFFDCMIISNNKKYRIKLLPIFTRYSVMKIITLLFS 250
           +FF+   ++FF C+ +        KLLP+   Y ++ IIT +FS
Sbjct: 64  VFFLCIAMIFFACLSLLERFSGLFKLLPLILMY-IIYIITQIFS 106


>U23179-4|AAK68209.1|  341|Caenorhabditis elegans Serpentine
           receptor, class b (beta)protein 3 protein.
          Length = 341

 Score = 30.7 bits (66), Expect = 0.78
 Identities = 12/41 (29%), Positives = 24/41 (58%)
 Frame = +2

Query: 113 FCLFFIYTYLVFFDCMIISNNKKYRIKLLPIFTRYSVMKII 235
           F L F+  + +  +C+++  +KK RIK   +  RY + +I+
Sbjct: 191 FVLLFVKIFNLLLNCILLRIHKKIRIKYYSLSVRYEMEEIL 231


>Z81527-2|CAB04270.1|  361|Caenorhabditis elegans Hypothetical
           protein F35E12.2 protein.
          Length = 361

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 5/37 (13%)
 Frame = +2

Query: 389 YFYTSILNYHKLKI*YSSTY----PM-PLYKTHT*LN 484
           +FY ++L +HK K   S TY    P+ P Y T T LN
Sbjct: 281 HFYWTVLKFHKSKTNISKTYIELRPLSPTYNTSTLLN 317


>Z81523-2|CAB04248.1|  928|Caenorhabditis elegans Hypothetical
           protein F32H2.1b protein.
          Length = 928

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +1

Query: 160 DNFEQQKIPNKITANIYTVFSNEN 231
           D  E ++IPN++   +Y  F+NEN
Sbjct: 488 DIVEAEQIPNELMKEVYEKFANEN 511


>Z81523-1|CAB04241.1|  944|Caenorhabditis elegans Hypothetical
           protein F32H2.1a protein.
          Length = 944

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +1

Query: 160 DNFEQQKIPNKITANIYTVFSNEN 231
           D  E ++IPN++   +Y  F+NEN
Sbjct: 488 DIVEAEQIPNELMKEVYEKFANEN 511


>Z93395-2|CAB07705.1|  905|Caenorhabditis elegans Hypothetical
           protein ZC101.1 protein.
          Length = 905

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = -3

Query: 180 FLLFEIIIQSKKTKYVYIKKRQNL*Q*HFMY 88
           ++ FE+I+ SK     ++KKR +L   HFM+
Sbjct: 864 YIYFELIVPSKCLTLFFLKKRSSL---HFMF 891


>Z83112-5|CAB05541.1|  905|Caenorhabditis elegans Hypothetical
           protein ZC101.1 protein.
          Length = 905

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = -3

Query: 180 FLLFEIIIQSKKTKYVYIKKRQNL*Q*HFMY 88
           ++ FE+I+ SK     ++KKR +L   HFM+
Sbjct: 864 YIYFELIVPSKCLTLFFLKKRSSL---HFMF 891


>Z73972-9|CAB60280.2|  353|Caenorhabditis elegans Hypothetical
           protein F15H10.8 protein.
          Length = 353

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +2

Query: 83  YVYMKCYCHKFCLFFIYTYLVFFDCMIISNNKKY 184
           Y Y K + H   + F+  +LVF      SNN +Y
Sbjct: 21  YRYRKSFLHYCAIIFVVIFLVFNLFSFDSNNSEY 54


>Z71177-10|CAB60279.2|  353|Caenorhabditis elegans Hypothetical
           protein F15H10.8 protein.
          Length = 353

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +2

Query: 83  YVYMKCYCHKFCLFFIYTYLVFFDCMIISNNKKY 184
           Y Y K + H   + F+  +LVF      SNN +Y
Sbjct: 21  YRYRKSFLHYCAIIFVVIFLVFNLFSFDSNNSEY 54


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,665,058
Number of Sequences: 27780
Number of extensions: 199923
Number of successful extensions: 472
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 457
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 472
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)