Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG1046
         (619 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81123-5|CAB76411.2|  393|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z50071-9|CAA90404.3|  393|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z92835-4|CAE54910.1| 1135|Caenorhabditis elegans Hypothetical pr...    28   6.1  
Z92835-3|CAB07397.1| 1130|Caenorhabditis elegans Hypothetical pr...    28   6.1  
Z92835-2|CAB07396.1| 1133|Caenorhabditis elegans Hypothetical pr...    28   6.1  

>Z81123-5|CAB76411.2|  393|Caenorhabditis elegans Hypothetical
           protein T07D4.1 protein.
          Length = 393

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 6/56 (10%)
 Frame = -3

Query: 182 YTNLKKCQEKYNFPSGRIYNMDETGIVTVPKKTHKVISPK------GKKKLIKLFL 33
           Y N  +    +   +GRI    +  ++ VPK+  KV  PK      G++K+++L +
Sbjct: 248 YANTAQPGSSWQMKNGRIVVYKQESLLNVPKREKKVKEPKRPKDTEGRRKVVRLLV 303


>Z50071-9|CAA90404.3|  393|Caenorhabditis elegans Hypothetical
           protein T07D4.1 protein.
          Length = 393

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 6/56 (10%)
 Frame = -3

Query: 182 YTNLKKCQEKYNFPSGRIYNMDETGIVTVPKKTHKVISPK------GKKKLIKLFL 33
           Y N  +    +   +GRI    +  ++ VPK+  KV  PK      G++K+++L +
Sbjct: 248 YANTAQPGSSWQMKNGRIVVYKQESLLNVPKREKKVKEPKRPKDTEGRRKVVRLLV 303


>Z92835-4|CAE54910.1| 1135|Caenorhabditis elegans Hypothetical
           protein H19N07.2c protein.
          Length = 1135

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 15/48 (31%), Positives = 25/48 (52%)
 Frame = -3

Query: 149 NFPSGRIYNMDETGIVTVPKKTHKVISPKGKKKLIKLFLENPRAEFLQ 6
           N+  GR+    + GI+ V K      +   K+K+ +LFL+    EF+Q
Sbjct: 767 NYSIGRLVEEQDGGILVVEKVETSTSTQNAKQKMNELFLD-VEVEFVQ 813


>Z92835-3|CAB07397.1| 1130|Caenorhabditis elegans Hypothetical
           protein H19N07.2b protein.
          Length = 1130

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 15/48 (31%), Positives = 25/48 (52%)
 Frame = -3

Query: 149 NFPSGRIYNMDETGIVTVPKKTHKVISPKGKKKLIKLFLENPRAEFLQ 6
           N+  GR+    + GI+ V K      +   K+K+ +LFL+    EF+Q
Sbjct: 767 NYSIGRLVEEQDGGILVVEKVETSTSTQNAKQKMNELFLD-VEVEFVQ 813


>Z92835-2|CAB07396.1| 1133|Caenorhabditis elegans Hypothetical
           protein H19N07.2a protein.
          Length = 1133

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 15/48 (31%), Positives = 25/48 (52%)
 Frame = -3

Query: 149 NFPSGRIYNMDETGIVTVPKKTHKVISPKGKKKLIKLFLENPRAEFLQ 6
           N+  GR+    + GI+ V K      +   K+K+ +LFL+    EF+Q
Sbjct: 767 NYSIGRLVEEQDGGILVVEKVETSTSTQNAKQKMNELFLD-VEVEFVQ 813


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,329,143
Number of Sequences: 27780
Number of extensions: 305724
Number of successful extensions: 703
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 701
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)