Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG1045
         (627 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0BRT7 Cluster: Chromosome undetermined scaffold_123, w...    35   1.4  
UniRef50_Q24NT3 Cluster: Putative uncharacterized protein; n=1; ...    34   3.2  
UniRef50_UPI0001560201 Cluster: PREDICTED: hypothetical protein;...    33   5.6  
UniRef50_UPI000050186A Cluster: UPI000050186A related cluster; n...    33   7.4  
UniRef50_Q64239 Cluster: 1st Met is at position 21; n=1; Mus sp....    33   7.4  
UniRef50_Q62097 Cluster: Mus musculus ORFs (putative primordial ...    33   7.4  
UniRef50_Q5CYU1 Cluster: Very large low complexity protein; n=3;...    33   7.4  
UniRef50_Q4X807 Cluster: Putative uncharacterized protein; n=1; ...    33   7.4  
UniRef50_Q22W09 Cluster: ComB, putative; n=1; Tetrahymena thermo...    33   7.4  
UniRef50_UPI0000DBF0D8 Cluster: UPI0000DBF0D8 related cluster; n...    32   9.8  

>UniRef50_A0BRT7 Cluster: Chromosome undetermined scaffold_123,
           whole genome shotgun sequence; n=3; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_123,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 957

 Score = 35.1 bits (77), Expect = 1.4
 Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
 Frame = -2

Query: 206 IYSIMIILLYCPYEEINICVDISN-YI*HFTSIPMTNAIYCYAGKSNAIYRRIVERI 39
           +Y I+ +LL C Y E++I + ++N ++ H  SI M  A YCYA        +I+ ++
Sbjct: 58  LYQILYLLLNCLYTEVSIRMPMNNPFVNHSNSI-MIIANYCYANTDQQQNIQIISKL 113


>UniRef50_Q24NT3 Cluster: Putative uncharacterized protein; n=1;
           Desulfitobacterium hafniense Y51|Rep: Putative
           uncharacterized protein - Desulfitobacterium hafniense
           (strain Y51)
          Length = 107

 Score = 33.9 bits (74), Expect = 3.2
 Identities = 16/47 (34%), Positives = 27/47 (57%)
 Frame = -2

Query: 314 AISSTYQIIRGTRII*GVNLYAVCIPIAINIYIRKYIYSIMIILLYC 174
           +I+     IRG+ II  + LY V + I + I  R +++ IM I+ +C
Sbjct: 17  SIALRASFIRGSDIILTIGLYIVSLDIILTILSRFWVFPIMSIIFFC 63


>UniRef50_UPI0001560201 Cluster: PREDICTED: hypothetical protein;
           n=1; Equus caballus|Rep: PREDICTED: hypothetical protein
           - Equus caballus
          Length = 187

 Score = 33.1 bits (72), Expect = 5.6
 Identities = 23/58 (39%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
 Frame = -2

Query: 248 VCIPIAINIYIRKYIYSIMIILLYC---PYEEINICVDISNYI*HFTSIPMTNAIYCY 84
           +CI I   IYI  YIY  + I +Y     Y  I IC  +  YI  F  I M   IY Y
Sbjct: 77  ICIYIYPYIYIYIYIYPYIYIYIYIYTYIYTHIYICTYLYIYIYSFIYIYMYTYIYMY 134



 Score = 32.7 bits (71), Expect = 7.4
 Identities = 16/39 (41%), Positives = 24/39 (61%)
 Frame = +2

Query: 128 ICSYLYLHIYLFLRMGNIVILSLYYICTYVCIY*LQSVY 244
           IC+YLY++IY F+    I + +  Y+ TY+ IY    VY
Sbjct: 111 ICTYLYIYIYSFI---YIYMYTYIYMYTYIYIYIYTYVY 146



 Score = 32.3 bits (70), Expect = 9.8
 Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = +2

Query: 128 ICSYLYLHIYLFLRMGNIVILSLY-YICTYVCIY*LQSVY 244
           IC Y+Y +IY+++ +   + + +Y Y   Y+CIY    +Y
Sbjct: 23  ICIYIYPYIYIYIYIYPYIYIYIYIYPYIYICIYIYPYIY 62


>UniRef50_UPI000050186A Cluster: UPI000050186A related cluster; n=1;
           Rattus norvegicus|Rep: UPI000050186A UniRef100 entry -
           Rattus norvegicus
          Length = 73

 Score = 32.7 bits (71), Expect = 7.4
 Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
 Frame = -2

Query: 248 VCIPIAINIYIRKYIYSIMIILLY-CPYEEINICVDISNYI*HFTSIPMTNAIYCYAGKS 72
           +CI + I IY+   IY  M + +Y C Y  I +C+ +  Y+     I M   +Y Y    
Sbjct: 4   MCICVCICIYMYICIYMYMCVYMYMCVYVHIYMCIFVLLYVYCVLYICMCVYVYIYVYVY 63

Query: 71  NAIY 60
             IY
Sbjct: 64  ICIY 67


>UniRef50_Q64239 Cluster: 1st Met is at position 21; n=1; Mus
           sp.|Rep: 1st Met is at position 21 - Mus sp
          Length = 115

 Score = 32.7 bits (71), Expect = 7.4
 Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 4/36 (11%)
 Frame = +2

Query: 128 ICSYLYLHIY----LFLRMGNIVILSLYYICTYVCI 223
           IC Y+Y+HI     +++ M   + + +Y +CTYVCI
Sbjct: 7   ICVYVYIHICVCSCMYVSMHLPMYVCMYVLCTYVCI 42


>UniRef50_Q62097 Cluster: Mus musculus ORFs (putative primordial
           protein), complete cds; n=6; Eukaryota|Rep: Mus musculus
           ORFs (putative primordial protein), complete cds - Mus
           musculus (Mouse)
          Length = 250

 Score = 32.7 bits (71), Expect = 7.4
 Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +2

Query: 128 ICSYLYLHI-YLFLRMGNIVILSLYYICTYVCIY 226
           +C  +YL I YL + + +I +    YIC YVC+Y
Sbjct: 197 VCLLIYLPIIYLSMYLSSISLCVCMYICMYVCMY 230


>UniRef50_Q5CYU1 Cluster: Very large low complexity protein; n=3;
           cellular organisms|Rep: Very large low complexity
           protein - Cryptosporidium parvum Iowa II
          Length = 5832

 Score = 32.7 bits (71), Expect = 7.4
 Identities = 16/38 (42%), Positives = 24/38 (63%)
 Frame = -1

Query: 375 NEINTKSLNAKSSKGTLTTESDLFYIPNNQGDKNHLRS 262
           N I+TKSL+ K +KG  ++ +       N GDKNH++S
Sbjct: 812 NHISTKSLDTKQNKGLWSSFTGWL---TNSGDKNHIKS 846


>UniRef50_Q4X807 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 104

 Score = 32.7 bits (71), Expect = 7.4
 Identities = 12/40 (30%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = +2

Query: 128 ICSYLYLHIYLFLRMGNIVILSLY-YICTYVCIY*LQSVY 244
           +C Y+ + +Y+++ M   V + +Y Y+C  VC+Y     Y
Sbjct: 53  VCMYVCMRLYMYVCMPMYVCMYVYVYVCMCVCVYICMCAY 92


>UniRef50_Q22W09 Cluster: ComB, putative; n=1; Tetrahymena
           thermophila SB210|Rep: ComB, putative - Tetrahymena
           thermophila SB210
          Length = 819

 Score = 32.7 bits (71), Expect = 7.4
 Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = -1

Query: 378 NNEINTKSLNAKSSKGT-LTTESDLFYIPNNQGDKNHLRSELI 253
           NN  N+ S ++K+S  T L  +++L Y PN+   KN  +S  +
Sbjct: 479 NNNSNSNSSHSKNSSNTDLNNQNNLNYNPNSNNQKNRFKSNTV 521


>UniRef50_UPI0000DBF0D8 Cluster: UPI0000DBF0D8 related cluster; n=1;
           Rattus norvegicus|Rep: UPI0000DBF0D8 UniRef100 entry -
           Rattus norvegicus
          Length = 287

 Score = 32.3 bits (70), Expect = 9.8
 Identities = 13/39 (33%), Positives = 24/39 (61%)
 Frame = +2

Query: 128 ICSYLYLHIYLFLRMGNIVILSLYYICTYVCIY*LQSVY 244
           +C+YLY+H+YL   +G++ + +  Y+C   C+     VY
Sbjct: 196 VCAYLYVHVYL---LGHVCVRT--YVCVCACVLMRPCVY 229


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 548,381,636
Number of Sequences: 1657284
Number of extensions: 10256330
Number of successful extensions: 20861
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 19258
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20624
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46051731393
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)