Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG1045
         (627 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0150 - 20215070-20217577                                         29   2.3  
07_03_0423 + 18035688-18036572,18036659-18036978,18052618-180527...    28   5.3  

>02_04_0150 - 20215070-20217577
          Length = 835

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
 Frame = -2

Query: 263 VNLYAVCIPIAI---NIYIRKYIYSIMIILLYC 174
           V  Y   IP+A+    I+I  + +S++ ILLYC
Sbjct: 394 VEYYQAIIPLALPKPGIFIANFAFSVVFILLYC 426


>07_03_0423 +
           18035688-18036572,18036659-18036978,18052618-18052724,
           18053001-18053104,18054129-18054328,18054422-18054522,
           18054695-18054841,18055007-18055166,18055287-18055368,
           18056070-18056336,18056846-18056973,18057513-18057672
          Length = 886

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -2

Query: 227 NIYIRKYIYSIMIILLYCPYEEINICVDISN 135
           N  IR Y Y +++  LY PY   N C + +N
Sbjct: 809 NKSIRSYRYFVLLAKLYMPYAFFNACFNGTN 839


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,898,740
Number of Sequences: 37544
Number of extensions: 245993
Number of successful extensions: 363
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 360
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 363
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1525730988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)