Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG1045
         (627 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF067220-6|AAC16980.2|  303|Caenorhabditis elegans Hypothetical ...    29   3.6  
Z81063-1|CAB02952.1|  376|Caenorhabditis elegans Hypothetical pr...    28   6.3  
Z81069-3|CAB02989.1|  352|Caenorhabditis elegans Hypothetical pr...    27   8.3  

>AF067220-6|AAC16980.2|  303|Caenorhabditis elegans Hypothetical
           protein C33E10.8 protein.
          Length = 303

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
 Frame = -2

Query: 326 LPPRAISSTYQIIRGTR-----II*GVNLYAVCIPIAINIYIRKYIYSIMIILLY 177
           LPPRAI+    II   +     II   +L +V  PIA  +YI  + Y + + L++
Sbjct: 15  LPPRAINKVLNIISFFQLLVLVIIGKFDLNSVSHPIAEELYIGLHFYGLFVNLMF 69


>Z81063-1|CAB02952.1|  376|Caenorhabditis elegans Hypothetical
           protein F15D3.2 protein.
          Length = 376

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -2

Query: 623 HKSDKFCLK*HSFVNCILKNIHRFLPIFK*FIMLNDN 513
           H  +++  + H FV  ILK    F P +K  I LN N
Sbjct: 258 HLVNEYSREKHDFVMAILKTYKEFQPTYKYHIGLNGN 294


>Z81069-3|CAB02989.1|  352|Caenorhabditis elegans Hypothetical
           protein F25H9.3 protein.
          Length = 352

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +3

Query: 225 INCNRYTYRV*VHSLDDSCPPDYLVCRR 308
           + C+RY     +HS DDSC  D+ V +R
Sbjct: 25  VKCHRYV----LHSQDDSCEGDFCVIQR 48


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,078,326
Number of Sequences: 27780
Number of extensions: 257784
Number of successful extensions: 487
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 487
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)